prototype for surfacing docs without a query

* refactor file extension checking and add test for blob s3

* code review

* fix checking ext

---------

Co-authored-by: Richard Kuo (Onyx) <rkuo@onyx.app>

.github/CODEOWNERS

@@ -0,0 +1 @@
+* @onyx-dot-app/onyx-core-team

.github/actions/custom-build-and-push/action.yml

@@ -0,0 +1,109 @@
+name: 'Build and Push Docker Image with Retry'
+description: 'Attempts to build and push a Docker image, with a retry on failure'
+inputs:
+  context:
+    description: 'Build context'
+    required: true
+  file:
+    description: 'Dockerfile location'
+    required: true
+  platforms:
+    description: 'Target platforms'
+    required: true
+  pull:
+    description: 'Always attempt to pull a newer version of the image'
+    required: false
+    default: 'true'
+  push:
+    description: 'Push the image to registry'
+    required: false
+    default: 'true'
+  load:
+    description: 'Load the image into Docker daemon'
+    required: false
+    default: 'true'
+  tags:
+    description: 'Image tags'
+    required: true
+  cache-from:
+    description: 'Cache sources'
+    required: false
+  cache-to:
+    description: 'Cache destinations'
+    required: false
+  retry-wait-time:
+    description: 'Time to wait before attempt 2 in seconds'
+    required: false
+    default: '60'
+  retry-wait-time-2:
+    description: 'Time to wait before attempt 3 in seconds'
+    required: false
+    default: '120'
+
+runs:
+  using: "composite"
+  steps:
+    - name: Build and push Docker image (Attempt 1 of 3)
+      id: buildx1
+      uses: docker/build-push-action@v6
+      continue-on-error: true
+      with:
+        context: ${{ inputs.context }}
+        file: ${{ inputs.file }}
+        platforms: ${{ inputs.platforms }}
+        pull: ${{ inputs.pull }}
+        push: ${{ inputs.push }}
+        load: ${{ inputs.load }}
+        tags: ${{ inputs.tags }}
+        cache-from: ${{ inputs.cache-from }}
+        cache-to: ${{ inputs.cache-to }}
+
+    - name: Wait before attempt 2
+      if: steps.buildx1.outcome != 'success'
+      run: |
+        echo "First attempt failed. Waiting ${{ inputs.retry-wait-time }} seconds before retry..."
+        sleep ${{ inputs.retry-wait-time }}
+      shell: bash
+
+    - name: Build and push Docker image (Attempt 2 of 3)
+      id: buildx2
+      if: steps.buildx1.outcome != 'success'
+      uses: docker/build-push-action@v6
+      with:
+        context: ${{ inputs.context }}
+        file: ${{ inputs.file }}
+        platforms: ${{ inputs.platforms }}
+        pull: ${{ inputs.pull }}
+        push: ${{ inputs.push }}
+        load: ${{ inputs.load }}
+        tags: ${{ inputs.tags }}
+        cache-from: ${{ inputs.cache-from }}
+        cache-to: ${{ inputs.cache-to }}
+
+    - name: Wait before attempt 3
+      if: steps.buildx1.outcome != 'success' && steps.buildx2.outcome != 'success'
+      run: |
+        echo "Second attempt failed. Waiting ${{ inputs.retry-wait-time-2 }} seconds before retry..."
+        sleep ${{ inputs.retry-wait-time-2 }}
+      shell: bash
+
+    - name: Build and push Docker image (Attempt 3 of 3)
+      id: buildx3
+      if: steps.buildx1.outcome != 'success' && steps.buildx2.outcome != 'success'
+      uses: docker/build-push-action@v6
+      with:
+        context: ${{ inputs.context }}
+        file: ${{ inputs.file }}
+        platforms: ${{ inputs.platforms }}
+        pull: ${{ inputs.pull }}
+        push: ${{ inputs.push }}
+        load: ${{ inputs.load }}
+        tags: ${{ inputs.tags }}
+        cache-from: ${{ inputs.cache-from }}
+        cache-to: ${{ inputs.cache-to }}
+
+    - name: Report failure
+      if: steps.buildx1.outcome != 'success' && steps.buildx2.outcome != 'success' && steps.buildx3.outcome != 'success'
+      run: |
+        echo "All attempts failed. Possible transient infrastucture issues? Try again later or inspect logs for details."
+      shell: bash

.github/pull_request_template.md

@@ -0,0 +1,14 @@
+## Description
+
+[Provide a brief description of the changes in this PR]
+
+## How Has This Been Tested?
+
+[Describe the tests you ran to verify your changes]
+
+## Backporting (check the box to trigger backport action)
+
+Note: You have to check that the action passes, otherwise resolve the conflicts manually and tag the patches.
+
+- [ ] This PR should be backported (make sure to check that the backport attempt succeeds)
+- [ ] [Optional] Override Linear Check

.github/workflows/docker-build-push-backend-container-on-tag.yml

@@ -0,0 +1,63 @@
+name: Build and Push Backend Image on Tag
+
+on:
+  push:
+    tags:
+      - "*"
+
+env:
+  REGISTRY_IMAGE: ${{ contains(github.ref_name, 'cloud') && 'onyxdotapp/onyx-backend-cloud' || 'onyxdotapp/onyx-backend' }}
+  LATEST_TAG: ${{ contains(github.ref_name, 'latest') }}
+
+jobs:
+  build-and-push:
+    # TODO: investigate a matrix build like the web container
+    # See https://runs-on.com/runners/linux/
+    runs-on: [runs-on, runner=8cpu-linux-x64, "run-id=${{ github.run_id }}"]
+
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v3
+
+      - name: Login to Docker Hub
+        uses: docker/login-action@v3
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_TOKEN }}
+
+      - name: Install build-essential
+        run: |
+          sudo apt-get update
+          sudo apt-get install -y build-essential
+
+      - name: Backend Image Docker Build and Push
+        uses: docker/build-push-action@v5
+        with:
+          context: ./backend
+          file: ./backend/Dockerfile
+          platforms: linux/amd64,linux/arm64
+          push: true
+          tags: |
+            ${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }}
+            ${{ env.LATEST_TAG == 'true' && format('{0}:latest', env.REGISTRY_IMAGE) || '' }}
+          build-args: |
+            ONYX_VERSION=${{ github.ref_name }}
+
+      # trivy has their own rate limiting issues causing this action to flake
+      # we worked around it by hardcoding to different db repos in env
+      # can re-enable when they figure it out
+      # https://github.com/aquasecurity/trivy/discussions/7538
+      # https://github.com/aquasecurity/trivy-action/issues/389
+      - name: Run Trivy vulnerability scanner
+        uses: aquasecurity/trivy-action@master
+        env:
+          TRIVY_DB_REPOSITORY: "public.ecr.aws/aquasecurity/trivy-db:2"
+          TRIVY_JAVA_DB_REPOSITORY: "public.ecr.aws/aquasecurity/trivy-java-db:1"
+        with:
+          # To run locally: trivy image --severity HIGH,CRITICAL onyxdotapp/onyx-backend
+          image-ref: docker.io/${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }}
+          severity: "CRITICAL,HIGH"
+          trivyignores: ./backend/.trivyignore

.github/workflows/docker-build-push-cloud-web-container-on-tag.yml

@@ -0,0 +1,141 @@
+name: Build and Push Cloud Web Image on Tag
+# Identical to the web container build, but with correct image tag and build args
+
+on:
+  push:
+    tags:
+      - "*"
+
+env:
+  REGISTRY_IMAGE: onyxdotapp/onyx-web-server-cloud
+  LATEST_TAG: ${{ contains(github.ref_name, 'latest') }}
+
+jobs:
+  build:
+    runs-on:
+      - runs-on
+      - runner=${{ matrix.platform == 'linux/amd64' && '8cpu-linux-x64' || '8cpu-linux-arm64' }}
+      - run-id=${{ github.run_id }}
+      - tag=platform-${{ matrix.platform }}
+    strategy:
+      fail-fast: false
+      matrix:
+        platform:
+          - linux/amd64
+          - linux/arm64
+
+    steps:
+      - name: Prepare
+        run: |
+          platform=${{ matrix.platform }}
+          echo "PLATFORM_PAIR=${platform//\//-}" >> $GITHUB_ENV
+
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Docker meta
+        id: meta
+        uses: docker/metadata-action@v5
+        with:
+          images: ${{ env.REGISTRY_IMAGE }}
+          tags: |
+            type=raw,value=${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }}
+            type=raw,value=${{ env.LATEST_TAG == 'true' && format('{0}:latest', env.REGISTRY_IMAGE) || '' }}
+
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v3
+
+      - name: Login to Docker Hub
+        uses: docker/login-action@v3
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_TOKEN }}
+
+      - name: Build and push by digest
+        id: build
+        uses: docker/build-push-action@v5
+        with:
+          context: ./web
+          file: ./web/Dockerfile
+          platforms: ${{ matrix.platform }}
+          push: true
+          build-args: |
+            ONYX_VERSION=${{ github.ref_name }}
+            NEXT_PUBLIC_CLOUD_ENABLED=true
+            NEXT_PUBLIC_POSTHOG_KEY=${{ secrets.POSTHOG_KEY }}
+            NEXT_PUBLIC_POSTHOG_HOST=${{ secrets.POSTHOG_HOST }}
+            NEXT_PUBLIC_SENTRY_DSN=${{ secrets.SENTRY_DSN }}
+            NEXT_PUBLIC_STRIPE_PUBLISHABLE_KEY=${{ secrets.STRIPE_PUBLISHABLE_KEY }}
+            NEXT_PUBLIC_GTM_ENABLED=true
+            NEXT_PUBLIC_FORGOT_PASSWORD_ENABLED=true
+            NEXT_PUBLIC_INCLUDE_ERROR_POPUP_SUPPORT_LINK=true
+            NODE_OPTIONS=--max-old-space-size=8192
+          # needed due to weird interactions with the builds for different platforms
+          no-cache: true
+          labels: ${{ steps.meta.outputs.labels }}
+          outputs: type=image,name=${{ env.REGISTRY_IMAGE }},push-by-digest=true,name-canonical=true,push=true
+
+      - name: Export digest
+        run: |
+          mkdir -p /tmp/digests
+          digest="${{ steps.build.outputs.digest }}"
+          touch "/tmp/digests/${digest#sha256:}"
+
+      - name: Upload digest
+        uses: actions/upload-artifact@v4
+        with:
+          name: digests-${{ env.PLATFORM_PAIR }}
+          path: /tmp/digests/*
+          if-no-files-found: error
+          retention-days: 1
+
+  merge:
+    runs-on: ubuntu-latest
+    needs:
+      - build
+    steps:
+      - name: Download digests
+        uses: actions/download-artifact@v4
+        with:
+          path: /tmp/digests
+          pattern: digests-*
+          merge-multiple: true
+
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v3
+
+      - name: Docker meta
+        id: meta
+        uses: docker/metadata-action@v5
+        with:
+          images: ${{ env.REGISTRY_IMAGE }}
+
+      - name: Login to Docker Hub
+        uses: docker/login-action@v3
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_TOKEN }}
+
+      - name: Create manifest list and push
+        working-directory: /tmp/digests
+        run: |
+          docker buildx imagetools create $(jq -cr '.tags | map("-t " + .) | join(" ")' <<< "$DOCKER_METADATA_OUTPUT_JSON") \
+            $(printf '${{ env.REGISTRY_IMAGE }}@sha256:%s ' *)
+
+      - name: Inspect image
+        run: |
+          docker buildx imagetools inspect ${{ env.REGISTRY_IMAGE }}:${{ steps.meta.outputs.version }}
+
+      # trivy has their own rate limiting issues causing this action to flake
+      # we worked around it by hardcoding to different db repos in env
+      # can re-enable when they figure it out
+      # https://github.com/aquasecurity/trivy/discussions/7538
+      # https://github.com/aquasecurity/trivy-action/issues/389
+      - name: Run Trivy vulnerability scanner
+        uses: aquasecurity/trivy-action@master
+        env:
+          TRIVY_DB_REPOSITORY: "public.ecr.aws/aquasecurity/trivy-db:2"
+          TRIVY_JAVA_DB_REPOSITORY: "public.ecr.aws/aquasecurity/trivy-java-db:1"
+        with:
+          image-ref: docker.io/${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }}
+          severity: "CRITICAL,HIGH"

.github/workflows/docker-build-push-model-server-container-on-tag.yml

@@ -0,0 +1,162 @@
+name: Build and Push Model Server Image on Tag
+
+on:
+  push:
+    tags:
+      - "*"
+
+env:
+  REGISTRY_IMAGE: ${{ contains(github.ref_name, 'cloud') && 'onyxdotapp/onyx-model-server-cloud' || 'onyxdotapp/onyx-model-server' }}
+  LATEST_TAG: ${{ contains(github.ref_name, 'latest') }}
+  DOCKER_BUILDKIT: 1
+  BUILDKIT_PROGRESS: plain
+
+jobs:
+
+#   Bypassing this for now as the idea of not building is glitching
+#   releases and builds that depends on everything being tagged in docker
+#   1) Preliminary job to check if the changed files are relevant
+#   check_model_server_changes:
+#     runs-on: ubuntu-latest
+#     outputs:
+#       changed: ${{ steps.check.outputs.changed }}
+#     steps:
+#       - name: Checkout code
+#         uses: actions/checkout@v4
+# 
+#       - name: Check if relevant files changed
+#         id: check
+#         run: |
+#           # Default to "false"
+#           echo "changed=false" >> $GITHUB_OUTPUT
+# 
+#           # Compare the previous commit (github.event.before) to the current one (github.sha)
+#           # If any file in backend/model_server/** or backend/Dockerfile.model_server is changed,
+#           # set changed=true
+#           if git diff --name-only ${{ github.event.before }} ${{ github.sha }} \
+#              | grep -E '^backend/model_server/|^backend/Dockerfile.model_server'; then
+#             echo "changed=true" >> $GITHUB_OUTPUT
+#           fi
+
+  check_model_server_changes:
+    runs-on: ubuntu-latest
+    outputs:
+      changed: "true"
+    steps:
+      - name: Bypass check and set output
+        run: echo "changed=true" >> $GITHUB_OUTPUT
+        
+  build-amd64:
+    needs: [check_model_server_changes]
+    if: needs.check_model_server_changes.outputs.changed == 'true'
+    runs-on:
+      [runs-on, runner=8cpu-linux-x64, "run-id=${{ github.run_id }}-amd64"]
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+
+      - name: System Info
+        run: |
+          df -h
+          free -h
+          docker system prune -af --volumes
+
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v3
+        with:
+          driver-opts: |
+            image=moby/buildkit:latest
+            network=host
+
+      - name: Login to Docker Hub
+        uses: docker/login-action@v3
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_TOKEN }}
+
+      - name: Build and Push AMD64
+        uses: docker/build-push-action@v5
+        with:
+          context: ./backend
+          file: ./backend/Dockerfile.model_server
+          platforms: linux/amd64
+          push: true
+          tags: ${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }}-amd64
+          build-args: |
+            DANSWER_VERSION=${{ github.ref_name }}
+          outputs: type=registry
+          provenance: false
+
+  build-arm64:
+    needs: [check_model_server_changes]
+    if: needs.check_model_server_changes.outputs.changed == 'true'
+    runs-on:
+      [runs-on, runner=8cpu-linux-x64, "run-id=${{ github.run_id }}-arm64"]
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+
+      - name: System Info
+        run: |
+          df -h
+          free -h
+          docker system prune -af --volumes
+
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v3
+        with:
+          driver-opts: |
+            image=moby/buildkit:latest
+            network=host
+
+      - name: Login to Docker Hub
+        uses: docker/login-action@v3
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_TOKEN }}
+
+      - name: Build and Push ARM64
+        uses: docker/build-push-action@v5
+        with:
+          context: ./backend
+          file: ./backend/Dockerfile.model_server
+          platforms: linux/arm64
+          push: true
+          tags: ${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }}-arm64
+          build-args: |
+            DANSWER_VERSION=${{ github.ref_name }}
+          outputs: type=registry
+          provenance: false
+
+  merge-and-scan:
+    needs: [build-amd64, build-arm64, check_model_server_changes]
+    if: needs.check_model_server_changes.outputs.changed == 'true'
+    runs-on: ubuntu-latest
+    steps:
+      - name: Login to Docker Hub
+        uses: docker/login-action@v3
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_TOKEN }}
+
+      - name: Create and Push Multi-arch Manifest
+        run: |
+          docker buildx create --use
+          docker buildx imagetools create -t ${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }} \
+            ${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }}-amd64 \
+            ${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }}-arm64
+          if [[ "${{ env.LATEST_TAG }}" == "true" ]]; then
+            docker buildx imagetools create -t ${{ env.REGISTRY_IMAGE }}:latest \
+              ${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }}-amd64 \
+              ${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }}-arm64
+          fi
+
+      - name: Run Trivy vulnerability scanner
+        uses: aquasecurity/trivy-action@master
+        env:
+          TRIVY_DB_REPOSITORY: "public.ecr.aws/aquasecurity/trivy-db:2"
+          TRIVY_JAVA_DB_REPOSITORY: "public.ecr.aws/aquasecurity/trivy-java-db:1"
+        with:
+          image-ref: docker.io/${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }}
+          severity: "CRITICAL,HIGH"
+          timeout: "10m"

.github/workflows/docker-build-push-web-container-on-tag.yml

@@ -0,0 +1,133 @@
+name: Build and Push Web Image on Tag
+
+on:
+  push:
+    tags:
+      - "*"
+
+env:
+  REGISTRY_IMAGE: onyxdotapp/onyx-web-server
+  LATEST_TAG: ${{ contains(github.ref_name, 'latest') }}
+
+jobs:
+  build:
+    runs-on:
+      - runs-on
+      - runner=${{ matrix.platform == 'linux/amd64' && '8cpu-linux-x64' || '8cpu-linux-arm64' }}
+      - run-id=${{ github.run_id }}
+      - tag=platform-${{ matrix.platform }}
+    strategy:
+      fail-fast: false
+      matrix:
+        platform:
+          - linux/amd64
+          - linux/arm64
+
+    steps:
+      - name: Prepare
+        run: |
+          platform=${{ matrix.platform }}
+          echo "PLATFORM_PAIR=${platform//\//-}" >> $GITHUB_ENV
+
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Docker meta
+        id: meta
+        uses: docker/metadata-action@v5
+        with:
+          images: ${{ env.REGISTRY_IMAGE }}
+          tags: |
+            type=raw,value=${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }}
+            type=raw,value=${{ env.LATEST_TAG == 'true' && format('{0}:latest', env.REGISTRY_IMAGE) || '' }}
+
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v3
+
+      - name: Login to Docker Hub
+        uses: docker/login-action@v3
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_TOKEN }}
+
+      - name: Build and push by digest
+        id: build
+        uses: docker/build-push-action@v5
+        with:
+          context: ./web
+          file: ./web/Dockerfile
+          platforms: ${{ matrix.platform }}
+          push: true
+          build-args: |
+            ONYX_VERSION=${{ github.ref_name }}
+            NODE_OPTIONS=--max-old-space-size=8192
+
+          # needed due to weird interactions with the builds for different platforms
+          no-cache: true
+          labels: ${{ steps.meta.outputs.labels }}
+          outputs: type=image,name=${{ env.REGISTRY_IMAGE }},push-by-digest=true,name-canonical=true,push=true
+
+      - name: Export digest
+        run: |
+          mkdir -p /tmp/digests
+          digest="${{ steps.build.outputs.digest }}"
+          touch "/tmp/digests/${digest#sha256:}"
+
+      - name: Upload digest
+        uses: actions/upload-artifact@v4
+        with:
+          name: digests-${{ env.PLATFORM_PAIR }}
+          path: /tmp/digests/*
+          if-no-files-found: error
+          retention-days: 1
+
+  merge:
+    runs-on: ubuntu-latest
+    needs:
+      - build
+    steps:
+      - name: Download digests
+        uses: actions/download-artifact@v4
+        with:
+          path: /tmp/digests
+          pattern: digests-*
+          merge-multiple: true
+
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v3
+
+      - name: Docker meta
+        id: meta
+        uses: docker/metadata-action@v5
+        with:
+          images: ${{ env.REGISTRY_IMAGE }}
+
+      - name: Login to Docker Hub
+        uses: docker/login-action@v3
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_TOKEN }}
+
+      - name: Create manifest list and push
+        working-directory: /tmp/digests
+        run: |
+          docker buildx imagetools create $(jq -cr '.tags | map("-t " + .) | join(" ")' <<< "$DOCKER_METADATA_OUTPUT_JSON") \
+            $(printf '${{ env.REGISTRY_IMAGE }}@sha256:%s ' *)
+
+      - name: Inspect image
+        run: |
+          docker buildx imagetools inspect ${{ env.REGISTRY_IMAGE }}:${{ steps.meta.outputs.version }}
+
+      # trivy has their own rate limiting issues causing this action to flake
+      # we worked around it by hardcoding to different db repos in env
+      # can re-enable when they figure it out
+      # https://github.com/aquasecurity/trivy/discussions/7538
+      # https://github.com/aquasecurity/trivy-action/issues/389
+      - name: Run Trivy vulnerability scanner
+        uses: aquasecurity/trivy-action@master
+        env:
+          TRIVY_DB_REPOSITORY: "public.ecr.aws/aquasecurity/trivy-db:2"
+          TRIVY_JAVA_DB_REPOSITORY: "public.ecr.aws/aquasecurity/trivy-java-db:1"
+        with:
+          image-ref: docker.io/${{ env.REGISTRY_IMAGE }}:${{ github.ref_name }}
+          severity: "CRITICAL,HIGH"

.github/workflows/docker-tag-latest.yml

@@ -0,0 +1,37 @@
+# This workflow is set up to be manually triggered via the GitHub Action tab.
+# Given a version, it will tag those backend and webserver images as "latest".
+
+name: Tag Latest Version
+
+on:
+  workflow_dispatch:
+    inputs:
+      version:
+        description: "The version (ie v0.0.1) to tag as latest"
+        required: true
+
+jobs:
+  tag:
+    # See https://runs-on.com/runners/linux/
+    # use a lower powered instance since this just does i/o to docker hub
+    runs-on: [runs-on, runner=2cpu-linux-x64, "run-id=${{ github.run_id }}"]
+    steps:
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v1
+
+      - name: Login to Docker Hub
+        uses: docker/login-action@v1
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_TOKEN }}
+
+      - name: Enable Docker CLI experimental features
+        run: echo "DOCKER_CLI_EXPERIMENTAL=enabled" >> $GITHUB_ENV
+
+      - name: Pull, Tag and Push Web Server Image
+        run: |
+          docker buildx imagetools create -t onyxdotapp/onyx-web-server:latest onyxdotapp/onyx-web-server:${{ github.event.inputs.version }}
+
+      - name: Pull, Tag and Push API Server Image
+        run: |
+          docker buildx imagetools create -t onyxdotapp/onyx-backend:latest onyxdotapp/onyx-backend:${{ github.event.inputs.version }}

.github/workflows/hotfix-release-branches.yml

@@ -0,0 +1,171 @@
+# This workflow is intended to be manually triggered via the GitHub Action tab.
+# Given a hotfix branch, it will attempt to open a PR to all release branches and
+# by default auto merge them
+
+name: Hotfix release branches
+
+on:
+  workflow_dispatch:
+    inputs:
+      hotfix_commit:
+        description: "Hotfix commit hash"
+        required: true
+      hotfix_suffix:
+        description: "Hotfix branch suffix (e.g. hotfix/v0.8-{suffix})"
+        required: true
+      release_branch_pattern:
+        description: "Release branch pattern (regex)"
+        required: true
+        default: "release/.*"
+      auto_merge:
+        description: "Automatically merge the hotfix PRs"
+        required: true
+        type: choice
+        default: "true"
+        options:
+          - true
+          - false
+
+jobs:
+  hotfix_release_branches:
+    permissions: write-all
+    # See https://runs-on.com/runners/linux/
+    # use a lower powered instance since this just does i/o to docker hub
+    runs-on: [runs-on, runner=2cpu-linux-x64, "run-id=${{ github.run_id }}"]
+    steps:
+      # needs RKUO_DEPLOY_KEY for write access to merge PR's
+      - name: Checkout Repository
+        uses: actions/checkout@v4
+        with:
+          ssh-key: "${{ secrets.RKUO_DEPLOY_KEY }}"
+          fetch-depth: 0
+
+      - name: Set up Git user
+        run: |
+          git config user.name "Richard Kuo [bot]"
+          git config user.email "rkuo[bot]@onyx.app"
+
+      - name: Fetch All Branches
+        run: |
+          git fetch --all --prune
+
+      - name: Verify Hotfix Commit Exists
+        run: |
+          git rev-parse --verify "${{ github.event.inputs.hotfix_commit }}" || { echo "Commit not found: ${{ github.event.inputs.hotfix_commit }}"; exit 1; }
+
+      - name: Get Release Branches
+        id: get_release_branches
+        run: |
+          BRANCHES=$(git branch -r | grep -E "${{ github.event.inputs.release_branch_pattern }}" | sed 's|origin/||' | tr -d ' ')
+          if [ -z "$BRANCHES" ]; then
+            echo "No release branches found matching pattern '${{ github.event.inputs.release_branch_pattern }}'."
+            exit 1
+          fi
+
+          echo "Found release branches:"
+          echo "$BRANCHES"
+
+          # Join the branches into a single line separated by commas
+          BRANCHES_JOINED=$(echo "$BRANCHES" | tr '\n' ',' | sed 's/,$//')
+
+          # Set the branches as an output
+          echo "branches=$BRANCHES_JOINED" >> $GITHUB_OUTPUT
+
+      # notes on all the vagaries of wiring up automated PR's
+      # https://github.com/peter-evans/create-pull-request/blob/main/docs/concepts-guidelines.md#triggering-further-workflow-runs
+      # we must use a custom token for GH_TOKEN to trigger the subsequent PR checks
+      - name: Create and Merge Pull Requests to Matching Release Branches
+        env:
+          HOTFIX_COMMIT: ${{ github.event.inputs.hotfix_commit }}
+          HOTFIX_SUFFIX: ${{ github.event.inputs.hotfix_suffix }}
+          AUTO_MERGE: ${{ github.event.inputs.auto_merge }}
+          GH_TOKEN: ${{ secrets.RKUO_PERSONAL_ACCESS_TOKEN }}
+        run: |
+          # Get the branches from the previous step
+          BRANCHES="${{ steps.get_release_branches.outputs.branches }}"
+
+          # Convert BRANCHES to an array
+          IFS=$',' read -ra BRANCH_ARRAY <<< "$BRANCHES"
+
+          # Loop through each release branch and create and merge a PR
+          for RELEASE_BRANCH in "${BRANCH_ARRAY[@]}"; do
+            echo "Processing $RELEASE_BRANCH..."
+            
+            # Parse out the release version by removing "release/" from the branch name
+            RELEASE_VERSION=${RELEASE_BRANCH#release/}
+            echo "Release version parsed: $RELEASE_VERSION"
+            
+            HOTFIX_BRANCH="hotfix/${RELEASE_VERSION}-${HOTFIX_SUFFIX}"
+            echo "Creating PR from $HOTFIX_BRANCH to $RELEASE_BRANCH"
+
+            # Checkout the release branch
+            echo "Checking out $RELEASE_BRANCH"
+            git checkout "$RELEASE_BRANCH"
+
+            # Create the new hotfix branch
+            if git rev-parse --verify "$HOTFIX_BRANCH" >/dev/null 2>&1; then
+              echo "Hotfix branch $HOTFIX_BRANCH already exists. Skipping branch creation."
+            else
+              echo "Branching $RELEASE_BRANCH to $HOTFIX_BRANCH"
+              git checkout -b "$HOTFIX_BRANCH"
+            fi
+            
+            # Check if the hotfix commit is a merge commit
+            if git rev-list --merges -n 1 "$HOTFIX_COMMIT" >/dev/null 2>&1; then
+              # -m 1 uses the target branch as the base (which is what we want)
+              echo "Hotfix commit $HOTFIX_COMMIT is a merge commit, using -m 1 for cherry-pick"
+              CHERRY_PICK_CMD="git cherry-pick -m 1 $HOTFIX_COMMIT"
+            else
+              CHERRY_PICK_CMD="git cherry-pick $HOTFIX_COMMIT"
+            fi
+
+            # Perform the cherry-pick
+            echo "Executing: $CHERRY_PICK_CMD"
+            eval "$CHERRY_PICK_CMD"
+
+            if [ $? -ne 0 ]; then
+              echo "Cherry-pick failed for $HOTFIX_COMMIT on $HOTFIX_BRANCH. Aborting..."
+              git cherry-pick --abort
+              continue
+            fi
+
+            # Push the hotfix branch to the remote
+            echo "Pushing $HOTFIX_BRANCH..."
+            git push origin "$HOTFIX_BRANCH"
+            echo "Hotfix branch $HOTFIX_BRANCH created and pushed."
+            
+            # Check if PR already exists
+            EXISTING_PR=$(gh pr list --head "$HOTFIX_BRANCH" --base "$RELEASE_BRANCH" --state open --json number --jq '.[0].number')
+
+            if [ -n "$EXISTING_PR" ]; then
+              echo "An open PR already exists: #$EXISTING_PR. Skipping..."
+              continue
+            fi
+            
+            # Create a new PR and capture the output
+            PR_OUTPUT=$(gh pr create --title "Merge $HOTFIX_BRANCH into $RELEASE_BRANCH" \
+              --body "Automated PR to merge \`$HOTFIX_BRANCH\` into \`$RELEASE_BRANCH\`." \
+              --head "$HOTFIX_BRANCH" --base "$RELEASE_BRANCH")
+
+            # Extract the URL from the output
+            PR_URL=$(echo "$PR_OUTPUT" | grep -Eo 'https://github.com/[^ ]+')
+            echo "Pull request created: $PR_URL"
+
+            # Extract PR number from URL
+            PR_NUMBER=$(basename "$PR_URL")
+            echo "Pull request created: $PR_NUMBER"
+
+            if [ "$AUTO_MERGE" == "true" ]; then
+              echo "Attempting to merge pull request #$PR_NUMBER"
+
+              # Attempt to merge the PR
+              gh pr merge "$PR_NUMBER" --merge --auto --delete-branch
+
+              if [ $? -eq 0 ]; then
+                echo "Pull request #$PR_NUMBER merged successfully."
+              else
+                # Optionally, handle the error or continue
+                echo "Failed to merge pull request #$PR_NUMBER."
+              fi
+            fi
+          done

.github/workflows/nightly-close-stale-issues.yml

@@ -0,0 +1,23 @@
+name: 'Nightly - Close stale issues and PRs'
+on:
+  schedule:
+    - cron: '0 11 * * *' # Runs every day at 3 AM PST / 4 AM PDT / 11 AM UTC
+
+permissions:
+  # contents: write # only for delete-branch option
+  issues: write
+  pull-requests: write
+  
+jobs:
+  stale:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/stale@v9
+        with:
+          stale-issue-message: 'This issue is stale because it has been open 75 days with no activity. Remove stale label or comment or this will be closed in 15 days.'
+          stale-pr-message: 'This PR is stale because it has been open 75 days with no activity. Remove stale label or comment or this will be closed in 15 days.'
+          close-issue-message: 'This issue was closed because it has been stalled for 90 days with no activity.'
+          close-pr-message: 'This PR was closed because it has been stalled for 90 days with no activity.'
+          days-before-stale: 75
+#           days-before-close: 90  # uncomment after we test stale behavior
+          

.github/workflows/nightly-scan-licenses.yml

@@ -0,0 +1,142 @@
+# Scan for problematic software licenses
+
+# trivy has their own rate limiting issues causing this action to flake
+# we worked around it by hardcoding to different db repos in env
+# can re-enable when they figure it out
+# https://github.com/aquasecurity/trivy/discussions/7538
+# https://github.com/aquasecurity/trivy-action/issues/389
+
+name: 'Nightly - Scan licenses'
+on:
+#   schedule:
+#     - cron: '0 14 * * *'  # Runs every day at 6 AM PST / 7 AM PDT / 2 PM UTC
+  workflow_dispatch:  # Allows manual triggering
+
+permissions:
+  actions: read
+  contents: read
+  security-events: write
+  
+jobs:
+  scan-licenses:
+    # See https://runs-on.com/runners/linux/
+    runs-on: [runs-on,runner=2cpu-linux-x64,"run-id=${{ github.run_id }}"]
+
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+        
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: '3.11'
+          cache: 'pip'
+          cache-dependency-path: |
+            backend/requirements/default.txt
+            backend/requirements/dev.txt
+            backend/requirements/model_server.txt
+      
+      - name: Get explicit and transitive dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install --retries 5 --timeout 30 -r backend/requirements/default.txt
+          pip install --retries 5 --timeout 30 -r backend/requirements/dev.txt
+          pip install --retries 5 --timeout 30 -r backend/requirements/model_server.txt
+          pip freeze > requirements-all.txt
+                    
+      - name: Check python
+        id: license_check_report
+        uses: pilosus/action-pip-license-checker@v2
+        with:
+          requirements: 'requirements-all.txt'
+          fail: 'Copyleft'
+          exclude: '(?i)^(pylint|aio[-_]*).*'
+          
+      - name: Print report
+        if: always()
+        run: echo "${{ steps.license_check_report.outputs.report }}"
+      
+      - name: Install npm dependencies
+        working-directory: ./web
+        run: npm ci
+
+        # be careful enabling the sarif and upload as it may spam the security tab
+        # with a huge amount of items. Work out the issues before enabling upload.       
+#       - name: Run Trivy vulnerability scanner in repo mode
+#         if: always()
+#         uses: aquasecurity/trivy-action@0.29.0
+#         with:
+#           scan-type: fs
+#           scan-ref: .
+#           scanners: license
+#           format: table
+#           severity: HIGH,CRITICAL
+# #           format: sarif
+# #           output: trivy-results.sarif
+# 
+# #       - name: Upload Trivy scan results to GitHub Security tab
+# #         uses: github/codeql-action/upload-sarif@v3
+# #         with:
+# #           sarif_file: trivy-results.sarif
+
+  scan-trivy:
+    # See https://runs-on.com/runners/linux/
+    runs-on: [runs-on,runner=2cpu-linux-x64,"run-id=${{ github.run_id }}"]
+      
+    steps:
+    - name: Set up Docker Buildx
+      uses: docker/setup-buildx-action@v3
+
+    - name: Login to Docker Hub
+      uses: docker/login-action@v3
+      with:
+        username: ${{ secrets.DOCKER_USERNAME }}
+        password: ${{ secrets.DOCKER_TOKEN }}
+
+    # Backend
+    - name: Pull backend docker image
+      run: docker pull onyxdotapp/onyx-backend:latest
+
+    - name: Run Trivy vulnerability scanner on backend
+      uses: aquasecurity/trivy-action@0.29.0
+      env:
+        TRIVY_DB_REPOSITORY: 'public.ecr.aws/aquasecurity/trivy-db:2'
+        TRIVY_JAVA_DB_REPOSITORY: 'public.ecr.aws/aquasecurity/trivy-java-db:1'
+      with:
+        image-ref: onyxdotapp/onyx-backend:latest
+        scanners: license
+        severity: HIGH,CRITICAL
+        vuln-type: library
+        exit-code: 0  # Set to 1 if we want a failed scan to fail the workflow
+
+    # Web server
+    - name: Pull web server docker image
+      run: docker pull onyxdotapp/onyx-web-server:latest
+          
+    - name: Run Trivy vulnerability scanner on web server
+      uses: aquasecurity/trivy-action@0.29.0
+      env:
+        TRIVY_DB_REPOSITORY: 'public.ecr.aws/aquasecurity/trivy-db:2'
+        TRIVY_JAVA_DB_REPOSITORY: 'public.ecr.aws/aquasecurity/trivy-java-db:1'
+      with:
+        image-ref: onyxdotapp/onyx-web-server:latest
+        scanners: license
+        severity: HIGH,CRITICAL
+        vuln-type: library
+        exit-code: 0
+
+    # Model server
+    - name: Pull model server docker image
+      run: docker pull onyxdotapp/onyx-model-server:latest
+
+    - name: Run Trivy vulnerability scanner
+      uses: aquasecurity/trivy-action@0.29.0
+      env:
+        TRIVY_DB_REPOSITORY: 'public.ecr.aws/aquasecurity/trivy-db:2'
+        TRIVY_JAVA_DB_REPOSITORY: 'public.ecr.aws/aquasecurity/trivy-java-db:1'
+      with:
+        image-ref: onyxdotapp/onyx-model-server:latest
+        scanners: license
+        severity: HIGH,CRITICAL
+        vuln-type: library
+        exit-code: 0

.github/workflows/pr-backport-autotrigger.yml

@@ -0,0 +1,124 @@
+name: Backport on Merge
+
+# Note this workflow does not trigger the builds, be sure to manually tag the branches to trigger the builds
+
+on:
+  pull_request:
+    types: [closed] # Later we check for merge so only PRs that go in can get backported
+
+permissions:
+  contents: write
+  actions: write
+
+jobs:
+  backport:
+    if: github.event.pull_request.merged == true
+    runs-on: ubuntu-latest
+    env:
+      GITHUB_TOKEN: ${{ secrets.YUHONG_GH_ACTIONS }}
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+        with:
+          ssh-key: "${{ secrets.RKUO_DEPLOY_KEY }}"
+          fetch-depth: 0
+
+      - name: Set up Git user
+        run: |
+          git config user.name "Richard Kuo [bot]"
+          git config user.email "rkuo[bot]@onyx.app"
+          git fetch --prune
+
+      - name: Check for Backport Checkbox
+        id: checkbox-check
+        run: |
+          PR_BODY="${{ github.event.pull_request.body }}"
+          if [[ "$PR_BODY" == *"[x] This PR should be backported"* ]]; then
+            echo "backport=true" >> $GITHUB_OUTPUT
+          else
+            echo "backport=false" >> $GITHUB_OUTPUT
+          fi
+
+      - name: List and sort release branches
+        id: list-branches
+        run: |
+          git fetch --all --tags
+          BRANCHES=$(git for-each-ref --format='%(refname:short)' refs/remotes/origin/release/* | sed 's|origin/release/||' | sort -Vr)
+          BETA=$(echo "$BRANCHES" | head -n 1)
+          STABLE=$(echo "$BRANCHES" | head -n 2 | tail -n 1)
+          echo "beta=release/$BETA" >> $GITHUB_OUTPUT
+          echo "stable=release/$STABLE" >> $GITHUB_OUTPUT
+          # Fetch latest tags for beta and stable
+          LATEST_BETA_TAG=$(git tag -l "v[0-9]*.[0-9]*.[0-9]*-beta.[0-9]*" | grep -E "^v[0-9]+\.[0-9]+\.[0-9]+-beta\.[0-9]+$" | grep -v -- "-cloud" | sort -Vr | head -n 1)
+          LATEST_STABLE_TAG=$(git tag -l "v[0-9]*.[0-9]*.[0-9]*" | grep -E "^v[0-9]+\.[0-9]+\.[0-9]+$" | sort -Vr | head -n 1)
+
+          # Handle case where no beta tags exist
+          if [[ -z "$LATEST_BETA_TAG" ]]; then
+            NEW_BETA_TAG="v1.0.0-beta.1"
+          else
+            NEW_BETA_TAG=$(echo $LATEST_BETA_TAG | awk -F '[.-]' '{print $1 "." $2 "." $3 "-beta." ($NF+1)}')
+          fi
+
+          # Increment latest stable tag
+          NEW_STABLE_TAG=$(echo $LATEST_STABLE_TAG | awk -F '.' '{print $1 "." $2 "." ($3+1)}')
+          echo "latest_beta_tag=$LATEST_BETA_TAG" >> $GITHUB_OUTPUT
+          echo "latest_stable_tag=$LATEST_STABLE_TAG" >> $GITHUB_OUTPUT
+          echo "new_beta_tag=$NEW_BETA_TAG" >> $GITHUB_OUTPUT
+          echo "new_stable_tag=$NEW_STABLE_TAG" >> $GITHUB_OUTPUT
+
+      - name: Echo branch and tag information
+        run: |
+          echo "Beta branch: ${{ steps.list-branches.outputs.beta }}"
+          echo "Stable branch: ${{ steps.list-branches.outputs.stable }}"
+          echo "Latest beta tag: ${{ steps.list-branches.outputs.latest_beta_tag }}"
+          echo "Latest stable tag: ${{ steps.list-branches.outputs.latest_stable_tag }}"
+          echo "New beta tag: ${{ steps.list-branches.outputs.new_beta_tag }}"
+          echo "New stable tag: ${{ steps.list-branches.outputs.new_stable_tag }}"
+
+      - name: Trigger Backport
+        if: steps.checkbox-check.outputs.backport == 'true'
+        run: |
+          set -e
+          echo "Backporting to beta ${{ steps.list-branches.outputs.beta }} and stable ${{ steps.list-branches.outputs.stable }}"
+
+          # Echo the merge commit SHA
+          echo "Merge commit SHA: ${{ github.event.pull_request.merge_commit_sha }}"
+
+          # Fetch all history for all branches and tags
+          git fetch --prune
+
+          # Reset and prepare the beta branch
+          git checkout ${{ steps.list-branches.outputs.beta }}
+          echo "Last 5 commits on beta branch:"
+          git log -n 5 --pretty=format:"%H"
+          echo ""  # Newline for formatting
+
+          # Cherry-pick the merge commit from the merged PR
+          git cherry-pick -m 1 ${{ github.event.pull_request.merge_commit_sha }} || {
+            echo "Cherry-pick to beta failed due to conflicts."
+            exit 1
+          }
+
+          # Create new beta branch/tag
+          git tag ${{ steps.list-branches.outputs.new_beta_tag }}
+          # Push the changes and tag to the beta branch using PAT
+          git push origin ${{ steps.list-branches.outputs.beta }}
+          git push origin ${{ steps.list-branches.outputs.new_beta_tag }}
+
+          # Reset and prepare the stable branch
+          git checkout ${{ steps.list-branches.outputs.stable }}
+          echo "Last 5 commits on stable branch:"
+          git log -n 5 --pretty=format:"%H"
+          echo ""  # Newline for formatting
+
+          # Cherry-pick the merge commit from the merged PR
+          git cherry-pick -m 1 ${{ github.event.pull_request.merge_commit_sha }} || {
+            echo "Cherry-pick to stable failed due to conflicts."
+            exit 1
+          }
+
+          # Create new stable branch/tag
+          git tag ${{ steps.list-branches.outputs.new_stable_tag }}
+          # Push the changes and tag to the stable branch using PAT
+          git push origin ${{ steps.list-branches.outputs.stable }}
+          git push origin ${{ steps.list-branches.outputs.new_stable_tag }}

.github/workflows/pr-helm-chart-testing.yml

@@ -0,0 +1,56 @@
+name: Helm - Lint and Test Charts
+
+on:
+  merge_group:
+  pull_request:
+    branches: [ main ]
+  workflow_dispatch:  # Allows manual triggering
+  
+jobs:
+  helm-chart-check:
+    # See https://runs-on.com/runners/linux/
+    runs-on: [runs-on,runner=8cpu-linux-x64,hdd=256,"run-id=${{ github.run_id }}"]
+
+    # fetch-depth 0 is required for helm/chart-testing-action
+    steps:
+    - name: Checkout code
+      uses: actions/checkout@v4
+      with:
+        fetch-depth: 0
+        
+    - name: Set up Helm
+      uses: azure/setup-helm@v4.2.0
+      with:
+        version: v3.17.0
+      
+    - name: Set up chart-testing
+      uses: helm/chart-testing-action@v2.7.0
+
+    # even though we specify chart-dirs in ct.yaml, it isn't used by ct for the list-changed command...
+    - name: Run chart-testing (list-changed)
+      id: list-changed
+      run: |
+        echo "default_branch: ${{ github.event.repository.default_branch }}"
+        changed=$(ct list-changed --remote origin --target-branch ${{ github.event.repository.default_branch }} --chart-dirs deployment/helm/charts)
+        echo "list-changed output: $changed"
+        if [[ -n "$changed" ]]; then
+          echo "changed=true" >> "$GITHUB_OUTPUT"
+        fi
+
+    # lint all charts if any changes were detected
+    - name: Run chart-testing (lint)
+      if: steps.list-changed.outputs.changed == 'true'
+      run: ct lint --config ct.yaml --all
+      # the following would lint only changed charts, but linting isn't expensive
+      # run: ct lint --config ct.yaml --target-branch ${{ github.event.repository.default_branch }}
+
+    - name: Create kind cluster
+      if: steps.list-changed.outputs.changed == 'true'
+      uses: helm/kind-action@v1.12.0
+
+    - name: Run chart-testing (install)
+      if: steps.list-changed.outputs.changed == 'true'
+      run: ct install --all --helm-extra-set-args="--set=nginx.enabled=false" --debug --config ct.yaml
+      # the following would install only changed charts, but we only have one chart so 
+      # don't worry about that for now
+      # run: ct install --target-branch ${{ github.event.repository.default_branch }}

.github/workflows/pr-integration-tests.yml

@@ -0,0 +1,268 @@
+name: Run Integration Tests v2
+concurrency:
+  group: Run-Integration-Tests-${{ github.workflow }}-${{ github.head_ref || github.event.workflow_run.head_branch || github.run_id }}
+  cancel-in-progress: true
+
+on:
+  merge_group:
+  pull_request:
+    branches:
+      - main
+      - "release/**"
+
+env:
+  OPENAI_API_KEY: ${{ secrets.OPENAI_API_KEY }}
+  SLACK_BOT_TOKEN: ${{ secrets.SLACK_BOT_TOKEN }}
+  CONFLUENCE_TEST_SPACE_URL: ${{ secrets.CONFLUENCE_TEST_SPACE_URL }}
+  CONFLUENCE_USER_NAME: ${{ secrets.CONFLUENCE_USER_NAME }}
+  CONFLUENCE_ACCESS_TOKEN: ${{ secrets.CONFLUENCE_ACCESS_TOKEN }}
+
+jobs:
+  integration-tests:
+    # See https://runs-on.com/runners/linux/
+    runs-on: [runs-on, runner=32cpu-linux-x64, "run-id=${{ github.run_id }}"]
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v3
+
+      - name: Login to Docker Hub
+        uses: docker/login-action@v3
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_TOKEN }}
+
+      # tag every docker image with "test" so that we can spin up the correct set
+      # of images during testing
+
+      # We don't need to build the Web Docker image since it's not yet used
+      # in the integration tests. We have a separate action to verify that it builds
+      # successfully.
+      - name: Pull Web Docker image
+        run: |
+          docker pull onyxdotapp/onyx-web-server:latest
+          docker tag onyxdotapp/onyx-web-server:latest onyxdotapp/onyx-web-server:test
+
+      # we use the runs-on cache for docker builds
+      # in conjunction with runs-on runners, it has better speed and unlimited caching
+      # https://runs-on.com/caching/s3-cache-for-github-actions/
+      # https://runs-on.com/caching/docker/
+      # https://github.com/moby/buildkit#s3-cache-experimental
+
+      # images are built and run locally for testing purposes. Not pushed.
+      - name: Build Backend Docker image
+        uses: ./.github/actions/custom-build-and-push
+        with:
+          context: ./backend
+          file: ./backend/Dockerfile
+          platforms: linux/amd64
+          tags: onyxdotapp/onyx-backend:test
+          push: false
+          load: true
+          cache-from: type=s3,prefix=cache/${{ github.repository }}/integration-tests/backend/,region=${{ env.RUNS_ON_AWS_REGION }},bucket=${{ env.RUNS_ON_S3_BUCKET_CACHE }}
+          cache-to: type=s3,prefix=cache/${{ github.repository }}/integration-tests/backend/,region=${{ env.RUNS_ON_AWS_REGION }},bucket=${{ env.RUNS_ON_S3_BUCKET_CACHE }},mode=max
+
+      - name: Build Model Server Docker image
+        uses: ./.github/actions/custom-build-and-push
+        with:
+          context: ./backend
+          file: ./backend/Dockerfile.model_server
+          platforms: linux/amd64
+          tags: onyxdotapp/onyx-model-server:test
+          push: false
+          load: true
+          cache-from: type=s3,prefix=cache/${{ github.repository }}/integration-tests/model-server/,region=${{ env.RUNS_ON_AWS_REGION }},bucket=${{ env.RUNS_ON_S3_BUCKET_CACHE }}
+          cache-to: type=s3,prefix=cache/${{ github.repository }}/integration-tests/model-server/,region=${{ env.RUNS_ON_AWS_REGION }},bucket=${{ env.RUNS_ON_S3_BUCKET_CACHE }},mode=max
+
+      - name: Build integration test Docker image
+        uses: ./.github/actions/custom-build-and-push
+        with:
+          context: ./backend
+          file: ./backend/tests/integration/Dockerfile
+          platforms: linux/amd64
+          tags: onyxdotapp/onyx-integration:test
+          push: false
+          load: true
+          cache-from: type=s3,prefix=cache/${{ github.repository }}/integration-tests/integration/,region=${{ env.RUNS_ON_AWS_REGION }},bucket=${{ env.RUNS_ON_S3_BUCKET_CACHE }}
+          cache-to: type=s3,prefix=cache/${{ github.repository }}/integration-tests/integration/,region=${{ env.RUNS_ON_AWS_REGION }},bucket=${{ env.RUNS_ON_S3_BUCKET_CACHE }},mode=max
+
+      # Start containers for multi-tenant tests
+      - name: Start Docker containers for multi-tenant tests
+        run: |
+          cd deployment/docker_compose
+          ENABLE_PAID_ENTERPRISE_EDITION_FEATURES=true \
+          MULTI_TENANT=true \
+          AUTH_TYPE=cloud \
+          REQUIRE_EMAIL_VERIFICATION=false \
+          DISABLE_TELEMETRY=true \
+          IMAGE_TAG=test \
+          DEV_MODE=true \
+          docker compose -f docker-compose.multitenant-dev.yml -p onyx-stack up -d
+        id: start_docker_multi_tenant
+
+      # In practice, `cloud` Auth type would require OAUTH credentials to be set.
+      - name: Run Multi-Tenant Integration Tests
+        run: |
+          echo "Waiting for 3 minutes to ensure API server is ready..."
+          sleep 180
+          echo "Running integration tests..."
+          docker run --rm --network onyx-stack_default \
+            --name test-runner \
+            -e POSTGRES_HOST=relational_db \
+            -e POSTGRES_USER=postgres \
+            -e POSTGRES_PASSWORD=password \
+            -e POSTGRES_DB=postgres \
+            -e POSTGRES_USE_NULL_POOL=true \
+            -e VESPA_HOST=index \
+            -e REDIS_HOST=cache \
+            -e API_SERVER_HOST=api_server \
+            -e OPENAI_API_KEY=${OPENAI_API_KEY} \
+            -e SLACK_BOT_TOKEN=${SLACK_BOT_TOKEN} \
+            -e TEST_WEB_HOSTNAME=test-runner \
+            -e AUTH_TYPE=cloud \
+            -e MULTI_TENANT=true \
+            -e REQUIRE_EMAIL_VERIFICATION=false \
+            -e DISABLE_TELEMETRY=true \
+            -e IMAGE_TAG=test \
+            -e DEV_MODE=true \
+            onyxdotapp/onyx-integration:test \
+            /app/tests/integration/multitenant_tests
+        continue-on-error: true
+        id: run_multitenant_tests
+
+      - name: Check multi-tenant test results
+        run: |
+          if [ ${{ steps.run_multitenant_tests.outcome }} == 'failure' ]; then
+            echo "Multi-tenant integration tests failed. Exiting with error."
+            exit 1
+          else
+            echo "All multi-tenant integration tests passed successfully."
+          fi
+
+      - name: Stop multi-tenant Docker containers
+        run: |
+          cd deployment/docker_compose
+          docker compose -f docker-compose.multitenant-dev.yml -p onyx-stack down -v
+
+      # NOTE: Use pre-ping/null pool to reduce flakiness due to dropped connections
+      - name: Start Docker containers
+        run: |
+          cd deployment/docker_compose
+          ENABLE_PAID_ENTERPRISE_EDITION_FEATURES=true \
+          AUTH_TYPE=basic \
+          POSTGRES_POOL_PRE_PING=true \
+          POSTGRES_USE_NULL_POOL=true \
+          REQUIRE_EMAIL_VERIFICATION=false \
+          DISABLE_TELEMETRY=true \
+          IMAGE_TAG=test \
+          INTEGRATION_TESTS_MODE=true \
+          docker compose -f docker-compose.dev.yml -p onyx-stack up -d
+        id: start_docker
+
+      - name: Wait for service to be ready
+        run: |
+          echo "Starting wait-for-service script..."
+
+          docker logs -f onyx-stack-api_server-1 &
+
+          start_time=$(date +%s)
+          timeout=300  # 5 minutes in seconds
+
+          while true; do
+            current_time=$(date +%s)
+            elapsed_time=$((current_time - start_time))
+            
+            if [ $elapsed_time -ge $timeout ]; then
+              echo "Timeout reached. Service did not become ready in 5 minutes."
+              exit 1
+            fi
+            
+            # Use curl with error handling to ignore specific exit code 56
+            response=$(curl -s -o /dev/null -w "%{http_code}" http://localhost:8080/health || echo "curl_error")
+            
+            if [ "$response" = "200" ]; then
+              echo "Service is ready!"
+              break
+            elif [ "$response" = "curl_error" ]; then
+              echo "Curl encountered an error, possibly exit code 56. Continuing to retry..."
+            else
+              echo "Service not ready yet (HTTP status $response). Retrying in 5 seconds..."
+            fi
+            
+            sleep 5
+          done
+          echo "Finished waiting for service."
+
+      - name: Start Mock Services
+        run: |
+          cd backend/tests/integration/mock_services
+          docker compose -f docker-compose.mock-it-services.yml \
+            -p mock-it-services-stack up -d
+
+      # NOTE: Use pre-ping/null to reduce flakiness due to dropped connections
+      - name: Run Standard Integration Tests
+        run: |
+          echo "Running integration tests..."
+          docker run --rm --network onyx-stack_default \
+            --name test-runner \
+            -e POSTGRES_HOST=relational_db \
+            -e POSTGRES_USER=postgres \
+            -e POSTGRES_PASSWORD=password \
+            -e POSTGRES_DB=postgres \
+            -e POSTGRES_POOL_PRE_PING=true \
+            -e POSTGRES_USE_NULL_POOL=true \
+            -e VESPA_HOST=index \
+            -e REDIS_HOST=cache \
+            -e API_SERVER_HOST=api_server \
+            -e OPENAI_API_KEY=${OPENAI_API_KEY} \
+            -e SLACK_BOT_TOKEN=${SLACK_BOT_TOKEN} \
+            -e CONFLUENCE_TEST_SPACE_URL=${CONFLUENCE_TEST_SPACE_URL} \
+            -e CONFLUENCE_USER_NAME=${CONFLUENCE_USER_NAME} \
+            -e CONFLUENCE_ACCESS_TOKEN=${CONFLUENCE_ACCESS_TOKEN} \
+            -e TEST_WEB_HOSTNAME=test-runner \
+            -e MOCK_CONNECTOR_SERVER_HOST=mock_connector_server \
+            -e MOCK_CONNECTOR_SERVER_PORT=8001 \
+            onyxdotapp/onyx-integration:test \
+            /app/tests/integration/tests \
+            /app/tests/integration/connector_job_tests
+        continue-on-error: true
+        id: run_tests
+
+      - name: Check test results
+        run: |
+          if [ ${{ steps.run_tests.outcome }} == 'failure' ]; then
+            echo "Integration tests failed. Exiting with error."
+            exit 1
+          else
+            echo "All integration tests passed successfully."
+          fi
+
+      # ------------------------------------------------------------
+      # Always gather logs BEFORE "down":
+      - name: Dump API server logs
+        if: always()
+        run: |
+          cd deployment/docker_compose
+          docker compose -f docker-compose.dev.yml -p onyx-stack logs --no-color api_server > $GITHUB_WORKSPACE/api_server.log || true
+
+      - name: Dump all-container logs (optional)
+        if: always()
+        run: |
+          cd deployment/docker_compose
+          docker compose -f docker-compose.dev.yml -p onyx-stack logs --no-color > $GITHUB_WORKSPACE/docker-compose.log || true
+
+      - name: Upload logs
+        if: always()
+        uses: actions/upload-artifact@v4
+        with:
+          name: docker-all-logs
+          path: ${{ github.workspace }}/docker-compose.log
+      # ------------------------------------------------------------
+
+      - name: Stop Docker containers
+        if: always()
+        run: |
+          cd deployment/docker_compose
+          docker compose -f docker-compose.dev.yml -p onyx-stack down -v

.github/workflows/pr-linear-check.yml

@@ -0,0 +1,29 @@
+name: Ensure PR references Linear
+
+on:
+  pull_request:
+    types: [opened, edited, reopened, synchronize]
+
+jobs:
+  linear-check:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Check PR body for Linear link or override
+        env:
+          PR_BODY: ${{ github.event.pull_request.body }}
+        run: |
+          # Looking for "https://linear.app" in the body
+          if echo "$PR_BODY" | grep -qE "https://linear\.app"; then
+            echo "Found a Linear link. Check passed."
+            exit 0
+          fi
+
+          # Looking for a checked override: "[x] Override Linear Check"
+          if echo "$PR_BODY" | grep -q "\[x\].*Override Linear Check"; then
+            echo "Override box is checked. Check passed."
+            exit 0
+          fi
+
+          # Otherwise, fail the run
+          echo "No Linear link or override found in the PR description."
+          exit 1

.github/workflows/pr-playwright-tests.yml

@@ -0,0 +1,244 @@
+name: Run Playwright Tests
+concurrency:
+  group: Run-Playwright-Tests-${{ github.workflow }}-${{ github.head_ref || github.event.workflow_run.head_branch || github.run_id }}
+  cancel-in-progress: true
+
+on: push
+
+env:
+  OPENAI_API_KEY: ${{ secrets.OPENAI_API_KEY }}
+  SLACK_BOT_TOKEN: ${{ secrets.SLACK_BOT_TOKEN }}
+  GEN_AI_API_KEY: ${{ secrets.OPENAI_API_KEY }}
+  MOCK_LLM_RESPONSE: true
+
+jobs:
+  playwright-tests:
+    name: Playwright Tests
+
+    # See https://runs-on.com/runners/linux/
+    runs-on:
+      [
+        runs-on,
+        runner=32cpu-linux-x64,
+        disk=large,
+        "run-id=${{ github.run_id }}",
+      ]
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+          cache: "pip"
+          cache-dependency-path: |
+            backend/requirements/default.txt
+            backend/requirements/dev.txt
+            backend/requirements/model_server.txt
+      - run: |
+          python -m pip install --upgrade pip
+          pip install --retries 5 --timeout 30 -r backend/requirements/default.txt
+          pip install --retries 5 --timeout 30 -r backend/requirements/dev.txt
+          pip install --retries 5 --timeout 30 -r backend/requirements/model_server.txt
+
+      - name: Setup node
+        uses: actions/setup-node@v4
+        with:
+          node-version: 22
+
+      - name: Install node dependencies
+        working-directory: ./web
+        run: npm ci
+
+      - name: Install playwright browsers
+        working-directory: ./web
+        run: npx playwright install --with-deps
+
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v3
+
+      - name: Login to Docker Hub
+        uses: docker/login-action@v3
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_TOKEN }}
+
+      # tag every docker image with "test" so that we can spin up the correct set
+      # of images during testing
+
+      # we use the runs-on cache for docker builds
+      # in conjunction with runs-on runners, it has better speed and unlimited caching
+      # https://runs-on.com/caching/s3-cache-for-github-actions/
+      # https://runs-on.com/caching/docker/
+      # https://github.com/moby/buildkit#s3-cache-experimental
+
+      # images are built and run locally for testing purposes. Not pushed.
+
+      - name: Build Web Docker image
+        uses: ./.github/actions/custom-build-and-push
+        with:
+          context: ./web
+          file: ./web/Dockerfile
+          platforms: linux/amd64
+          tags: onyxdotapp/onyx-web-server:test
+          push: false
+          load: true
+          cache-from: type=s3,prefix=cache/${{ github.repository }}/integration-tests/web-server/,region=${{ env.RUNS_ON_AWS_REGION }},bucket=${{ env.RUNS_ON_S3_BUCKET_CACHE }}
+          cache-to: type=s3,prefix=cache/${{ github.repository }}/integration-tests/web-server/,region=${{ env.RUNS_ON_AWS_REGION }},bucket=${{ env.RUNS_ON_S3_BUCKET_CACHE }},mode=max
+
+      - name: Build Backend Docker image
+        uses: ./.github/actions/custom-build-and-push
+        with:
+          context: ./backend
+          file: ./backend/Dockerfile
+          platforms: linux/amd64
+          tags: onyxdotapp/onyx-backend:test
+          push: false
+          load: true
+          cache-from: type=s3,prefix=cache/${{ github.repository }}/integration-tests/backend/,region=${{ env.RUNS_ON_AWS_REGION }},bucket=${{ env.RUNS_ON_S3_BUCKET_CACHE }}
+          cache-to: type=s3,prefix=cache/${{ github.repository }}/integration-tests/backend/,region=${{ env.RUNS_ON_AWS_REGION }},bucket=${{ env.RUNS_ON_S3_BUCKET_CACHE }},mode=max
+
+      - name: Build Model Server Docker image
+        uses: ./.github/actions/custom-build-and-push
+        with:
+          context: ./backend
+          file: ./backend/Dockerfile.model_server
+          platforms: linux/amd64
+          tags: onyxdotapp/onyx-model-server:test
+          push: false
+          load: true
+          cache-from: type=s3,prefix=cache/${{ github.repository }}/integration-tests/model-server/,region=${{ env.RUNS_ON_AWS_REGION }},bucket=${{ env.RUNS_ON_S3_BUCKET_CACHE }}
+          cache-to: type=s3,prefix=cache/${{ github.repository }}/integration-tests/model-server/,region=${{ env.RUNS_ON_AWS_REGION }},bucket=${{ env.RUNS_ON_S3_BUCKET_CACHE }},mode=max
+
+      - name: Start Docker containers
+        run: |
+          cd deployment/docker_compose
+          ENABLE_PAID_ENTERPRISE_EDITION_FEATURES=true \
+          AUTH_TYPE=basic \
+          GEN_AI_API_KEY=${{ secrets.OPENAI_API_KEY }} \
+          REQUIRE_EMAIL_VERIFICATION=false \
+          DISABLE_TELEMETRY=true \
+          IMAGE_TAG=test \
+          docker compose -f docker-compose.dev.yml -p danswer-stack up -d
+        id: start_docker
+
+      - name: Wait for service to be ready
+        run: |
+          echo "Starting wait-for-service script..."
+
+          docker logs -f danswer-stack-api_server-1 &
+
+          start_time=$(date +%s)
+          timeout=300  # 5 minutes in seconds
+
+          while true; do
+            current_time=$(date +%s)
+            elapsed_time=$((current_time - start_time))
+            
+            if [ $elapsed_time -ge $timeout ]; then
+              echo "Timeout reached. Service did not become ready in 5 minutes."
+              exit 1
+            fi
+            
+            # Use curl with error handling to ignore specific exit code 56
+            response=$(curl -s -o /dev/null -w "%{http_code}" http://localhost:8080/health || echo "curl_error")
+            
+            if [ "$response" = "200" ]; then
+              echo "Service is ready!"
+              break
+            elif [ "$response" = "curl_error" ]; then
+              echo "Curl encountered an error, possibly exit code 56. Continuing to retry..."
+            else
+              echo "Service not ready yet (HTTP status $response). Retrying in 5 seconds..."
+            fi
+            
+            sleep 5
+          done
+          echo "Finished waiting for service."
+
+      - name: Run pytest playwright test init
+        working-directory: ./backend
+        env:
+          PYTEST_IGNORE_SKIP: true
+        run: pytest -s tests/integration/tests/playwright/test_playwright.py
+
+      - name: Run Playwright tests
+        working-directory: ./web
+        run: npx playwright test
+
+      - uses: actions/upload-artifact@v4
+        if: always()
+        with:
+          # Chromatic automatically defaults to the test-results directory.
+          # Replace with the path to your custom directory and adjust the CHROMATIC_ARCHIVE_LOCATION environment variable accordingly.
+          name: test-results
+          path: ./web/test-results
+          retention-days: 30
+
+      # save before stopping the containers so the logs can be captured
+      - name: Save Docker logs
+        if: success() || failure()
+        run: |
+          cd deployment/docker_compose
+          docker compose -f docker-compose.dev.yml -p danswer-stack logs > docker-compose.log
+          mv docker-compose.log ${{ github.workspace }}/docker-compose.log
+
+      - name: Upload logs
+        if: success() || failure()
+        uses: actions/upload-artifact@v4
+        with:
+          name: docker-logs
+          path: ${{ github.workspace }}/docker-compose.log
+
+      - name: Stop Docker containers
+        run: |
+          cd deployment/docker_compose
+          docker compose -f docker-compose.dev.yml -p danswer-stack down -v
+
+# NOTE: Chromatic UI diff testing is currently disabled.
+# We are using Playwright for local and CI testing without visual regression checks.
+# Chromatic may be reintroduced in the future for UI diff testing if needed.
+
+# chromatic-tests:
+#   name: Chromatic Tests
+
+#   needs: playwright-tests
+#   runs-on:
+#     [
+#       runs-on,
+#       runner=32cpu-linux-x64,
+#       disk=large,
+#       "run-id=${{ github.run_id }}",
+#     ]
+#   steps:
+#     - name: Checkout code
+#       uses: actions/checkout@v4
+#       with:
+#         fetch-depth: 0
+
+#     - name: Setup node
+#       uses: actions/setup-node@v4
+#       with:
+#         node-version: 22
+
+#     - name: Install node dependencies
+#       working-directory: ./web
+#       run: npm ci
+
+#     - name: Download Playwright test results
+#       uses: actions/download-artifact@v4
+#       with:
+#         name: test-results
+#         path: ./web/test-results
+
+#     - name: Run Chromatic
+#       uses: chromaui/action@latest
+#       with:
+#         playwright: true
+#         projectToken: ${{ secrets.CHROMATIC_PROJECT_TOKEN }}
+#         workingDir: ./web
+#       env:
+#         CHROMATIC_ARCHIVE_LOCATION: ./test-results

.github/workflows/pr-python-checks.yml

@@ -0,0 +1,52 @@
+name: Python Checks
+
+on:
+  merge_group:
+  pull_request:
+    branches:
+      - main
+      - 'release/**'
+
+jobs:
+  mypy-check:
+    # See https://runs-on.com/runners/linux/
+    runs-on: [runs-on,runner=8cpu-linux-x64,"run-id=${{ github.run_id }}"]
+
+    steps:
+    - name: Checkout code
+      uses: actions/checkout@v4
+
+    - name: Set up Python
+      uses: actions/setup-python@v5
+      with:
+        python-version: '3.11'
+        cache: 'pip'
+        cache-dependency-path: |
+          backend/requirements/default.txt
+          backend/requirements/dev.txt
+          backend/requirements/model_server.txt
+    - run: |
+        python -m pip install --upgrade pip
+        pip install --retries 5 --timeout 30 -r backend/requirements/default.txt
+        pip install --retries 5 --timeout 30 -r backend/requirements/dev.txt
+        pip install --retries 5 --timeout 30 -r backend/requirements/model_server.txt
+
+    - name: Run MyPy
+      run: |
+        cd backend
+        mypy .
+
+    - name: Run ruff
+      run: |
+        cd backend
+        ruff .
+
+    - name: Check import order with reorder-python-imports
+      run: |
+        cd backend
+        find ./danswer -name "*.py" | xargs reorder-python-imports --py311-plus
+
+    - name: Check code formatting with Black
+      run: |
+        cd backend
+        black --check .

.github/workflows/pr-python-connector-tests.yml

@@ -0,0 +1,104 @@
+name: Connector Tests
+
+on:
+  merge_group:
+  pull_request:
+    branches: [main]
+  schedule:
+    # This cron expression runs the job daily at 16:00 UTC (9am PT)
+    - cron: "0 16 * * *"
+
+env:
+  # AWS
+  AWS_ACCESS_KEY_ID_DAILY_CONNECTOR_TESTS: ${{ secrets.AWS_ACCESS_KEY_ID_DAILY_CONNECTOR_TESTS }}
+  AWS_SECRET_ACCESS_KEY_DAILY_CONNECTOR_TESTS: ${{ secrets.AWS_SECRET_ACCESS_KEY_DAILY_CONNECTOR_TESTS }}
+  
+  # Confluence
+  CONFLUENCE_TEST_SPACE_URL: ${{ secrets.CONFLUENCE_TEST_SPACE_URL }}
+  CONFLUENCE_TEST_SPACE: ${{ secrets.CONFLUENCE_TEST_SPACE }}
+  CONFLUENCE_IS_CLOUD: ${{ secrets.CONFLUENCE_IS_CLOUD }}
+  CONFLUENCE_TEST_PAGE_ID: ${{ secrets.CONFLUENCE_TEST_PAGE_ID }}
+  CONFLUENCE_USER_NAME: ${{ secrets.CONFLUENCE_USER_NAME }}
+  CONFLUENCE_ACCESS_TOKEN: ${{ secrets.CONFLUENCE_ACCESS_TOKEN }}
+  # Jira
+  JIRA_USER_EMAIL: ${{ secrets.JIRA_USER_EMAIL }}
+  JIRA_API_TOKEN: ${{ secrets.JIRA_API_TOKEN }}
+  # Google
+  GOOGLE_DRIVE_SERVICE_ACCOUNT_JSON_STR: ${{ secrets.GOOGLE_DRIVE_SERVICE_ACCOUNT_JSON_STR }}
+  GOOGLE_DRIVE_OAUTH_CREDENTIALS_JSON_STR_TEST_USER_1: ${{ secrets.GOOGLE_DRIVE_OAUTH_CREDENTIALS_JSON_STR_TEST_USER_1 }}
+  GOOGLE_DRIVE_OAUTH_CREDENTIALS_JSON_STR: ${{ secrets.GOOGLE_DRIVE_OAUTH_CREDENTIALS_JSON_STR }}
+  GOOGLE_GMAIL_SERVICE_ACCOUNT_JSON_STR: ${{ secrets.GOOGLE_GMAIL_SERVICE_ACCOUNT_JSON_STR }}
+  GOOGLE_GMAIL_OAUTH_CREDENTIALS_JSON_STR: ${{ secrets.GOOGLE_GMAIL_OAUTH_CREDENTIALS_JSON_STR }}
+  # Slab
+  SLAB_BOT_TOKEN: ${{ secrets.SLAB_BOT_TOKEN }}
+  # Zendesk
+  ZENDESK_SUBDOMAIN: ${{ secrets.ZENDESK_SUBDOMAIN }}
+  ZENDESK_EMAIL: ${{ secrets.ZENDESK_EMAIL }}
+  ZENDESK_TOKEN: ${{ secrets.ZENDESK_TOKEN }}
+  # Salesforce
+  SF_USERNAME: ${{ secrets.SF_USERNAME }}
+  SF_PASSWORD: ${{ secrets.SF_PASSWORD }}
+  SF_SECURITY_TOKEN: ${{ secrets.SF_SECURITY_TOKEN }}
+  # Airtable
+  AIRTABLE_TEST_BASE_ID: ${{ secrets.AIRTABLE_TEST_BASE_ID }}
+  AIRTABLE_TEST_TABLE_ID: ${{ secrets.AIRTABLE_TEST_TABLE_ID }}
+  AIRTABLE_TEST_TABLE_NAME: ${{ secrets.AIRTABLE_TEST_TABLE_NAME }}
+  AIRTABLE_ACCESS_TOKEN: ${{ secrets.AIRTABLE_ACCESS_TOKEN }}
+  # Sharepoint
+  SHAREPOINT_CLIENT_ID: ${{ secrets.SHAREPOINT_CLIENT_ID }}
+  SHAREPOINT_CLIENT_SECRET: ${{ secrets.SHAREPOINT_CLIENT_SECRET }}
+  SHAREPOINT_CLIENT_DIRECTORY_ID: ${{ secrets.SHAREPOINT_CLIENT_DIRECTORY_ID }}
+  SHAREPOINT_SITE: ${{ secrets.SHAREPOINT_SITE }}
+  # Github
+  ACCESS_TOKEN_GITHUB: ${{ secrets.ACCESS_TOKEN_GITHUB }}
+  # Gitbook
+  GITBOOK_SPACE_ID: ${{ secrets.GITBOOK_SPACE_ID }}
+  GITBOOK_API_KEY: ${{ secrets.GITBOOK_API_KEY }}
+  # Notion
+  NOTION_INTEGRATION_TOKEN: ${{ secrets.NOTION_INTEGRATION_TOKEN }}
+  # Highspot
+  HIGHSPOT_KEY: ${{ secrets.HIGHSPOT_KEY }}
+  HIGHSPOT_SECRET: ${{ secrets.HIGHSPOT_SECRET }}
+
+jobs:
+  connectors-check:
+    # See https://runs-on.com/runners/linux/
+    runs-on: [runs-on, runner=8cpu-linux-x64, "run-id=${{ github.run_id }}"]
+
+    env:
+      PYTHONPATH: ./backend
+
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+          cache: "pip"
+          cache-dependency-path: |
+            backend/requirements/default.txt
+            backend/requirements/dev.txt
+
+      - name: Install Dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install --retries 5 --timeout 30 -r backend/requirements/default.txt
+          pip install --retries 5 --timeout 30 -r backend/requirements/dev.txt
+          playwright install chromium
+          playwright install-deps chromium
+
+      - name: Run Tests
+        shell: script -q -e -c "bash --noprofile --norc -eo pipefail {0}"
+        run: py.test -o junit_family=xunit2 -xv --ff backend/tests/daily/connectors
+
+      - name: Alert on Failure
+        if: failure() && github.event_name == 'schedule'
+        env:
+          SLACK_WEBHOOK: ${{ secrets.SLACK_WEBHOOK }}
+        run: |
+          curl -X POST \
+            -H 'Content-type: application/json' \
+            --data '{"text":"Scheduled Connector Tests failed! Check the run at: https://github.com/${{ github.repository }}/actions/runs/${{ github.run_id }}"}' \
+            $SLACK_WEBHOOK

.github/workflows/pr-python-model-tests.yml

@@ -0,0 +1,149 @@
+name: Model Server Tests
+
+on:
+  schedule:
+    # This cron expression runs the job daily at 16:00 UTC (9am PT)
+    - cron: "0 16 * * *"
+  workflow_dispatch:
+    inputs:
+      branch:
+        description: 'Branch to run the workflow on'
+        required: false
+        default: 'main'
+        
+env:
+  # Bedrock
+  AWS_ACCESS_KEY_ID: ${{ secrets.AWS_ACCESS_KEY_ID }}
+  AWS_SECRET_ACCESS_KEY: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
+  AWS_REGION_NAME: ${{ secrets.AWS_REGION_NAME }}
+
+  # API keys for testing
+  COHERE_API_KEY: ${{ secrets.COHERE_API_KEY }}
+  LITELLM_API_KEY: ${{ secrets.LITELLM_API_KEY }}
+  LITELLM_API_URL: ${{ secrets.LITELLM_API_URL }}
+  OPENAI_API_KEY: ${{ secrets.OPENAI_API_KEY }}
+  AZURE_API_KEY: ${{ secrets.AZURE_API_KEY }}
+  AZURE_API_URL: ${{ secrets.AZURE_API_URL }}
+
+jobs:
+  model-check:
+    # See https://runs-on.com/runners/linux/
+    runs-on: [runs-on,runner=8cpu-linux-x64,"run-id=${{ github.run_id }}"]
+
+    env:
+      PYTHONPATH: ./backend
+
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+
+      - name: Login to Docker Hub
+        uses: docker/login-action@v3
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_TOKEN }}
+
+      # tag every docker image with "test" so that we can spin up the correct set
+      # of images during testing
+
+      # We don't need to build the Web Docker image since it's not yet used
+      # in the integration tests. We have a separate action to verify that it builds
+      # successfully.
+      - name: Pull Model Server Docker image
+        run: |
+          docker pull onyxdotapp/onyx-model-server:latest
+          docker tag onyxdotapp/onyx-model-server:latest onyxdotapp/onyx-model-server:test
+          
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+          cache: "pip"
+          cache-dependency-path: |
+            backend/requirements/default.txt
+            backend/requirements/dev.txt
+
+      - name: Install Dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install --retries 5 --timeout 30 -r backend/requirements/default.txt
+          pip install --retries 5 --timeout 30 -r backend/requirements/dev.txt
+
+      - name: Start Docker containers
+        run: |
+          cd deployment/docker_compose
+          ENABLE_PAID_ENTERPRISE_EDITION_FEATURES=true \
+          AUTH_TYPE=basic \
+          REQUIRE_EMAIL_VERIFICATION=false \
+          DISABLE_TELEMETRY=true \
+          IMAGE_TAG=test \
+          docker compose -f docker-compose.model-server-test.yml -p onyx-stack up -d indexing_model_server
+        id: start_docker
+
+      - name: Wait for service to be ready
+        run: |
+          echo "Starting wait-for-service script..."
+
+          start_time=$(date +%s)
+          timeout=300  # 5 minutes in seconds
+
+          while true; do
+            current_time=$(date +%s)
+            elapsed_time=$((current_time - start_time))
+            
+            if [ $elapsed_time -ge $timeout ]; then
+              echo "Timeout reached. Service did not become ready in 5 minutes."
+              exit 1
+            fi
+            
+            # Use curl with error handling to ignore specific exit code 56
+            response=$(curl -s -o /dev/null -w "%{http_code}" http://localhost:9000/api/health || echo "curl_error")
+            
+            if [ "$response" = "200" ]; then
+              echo "Service is ready!"
+              break
+            elif [ "$response" = "curl_error" ]; then
+              echo "Curl encountered an error, possibly exit code 56. Continuing to retry..."
+            else
+              echo "Service not ready yet (HTTP status $response). Retrying in 5 seconds..."
+            fi
+            
+            sleep 5
+          done
+          echo "Finished waiting for service."
+          
+      - name: Run Tests
+        shell: script -q -e -c "bash --noprofile --norc -eo pipefail {0}"
+        run: |
+          py.test -o junit_family=xunit2 -xv --ff backend/tests/daily/llm
+          py.test -o junit_family=xunit2 -xv --ff backend/tests/daily/embedding
+
+      - name: Alert on Failure
+        if: failure() && github.event_name == 'schedule'
+        env:
+          SLACK_WEBHOOK: ${{ secrets.SLACK_WEBHOOK }}
+        run: |
+          curl -X POST \
+            -H 'Content-type: application/json' \
+            --data '{"text":"Scheduled Model Tests failed! Check the run at: https://github.com/${{ github.repository }}/actions/runs/${{ github.run_id }}"}' \
+            $SLACK_WEBHOOK
+            
+      - name: Dump all-container logs (optional)
+        if: always()
+        run: |
+          cd deployment/docker_compose
+          docker compose -f docker-compose.model-server-test.yml -p onyx-stack logs --no-color > $GITHUB_WORKSPACE/docker-compose.log || true
+
+      - name: Upload logs
+        if: always()
+        uses: actions/upload-artifact@v4
+        with:
+          name: docker-all-logs
+          path: ${{ github.workspace }}/docker-compose.log
+          
+      - name: Stop Docker containers
+        if: always()
+        run: |
+          cd deployment/docker_compose
+          docker compose -f docker-compose.model-server-test.yml -p onyx-stack down -v
+          

.github/workflows/pr-python-tests.yml

@@ -0,0 +1,40 @@
+name: Python Unit Tests
+
+on:
+  merge_group:
+  pull_request:
+    branches:
+      - main
+      - 'release/**'
+
+jobs:
+  backend-check:
+    # See https://runs-on.com/runners/linux/
+    runs-on: [runs-on,runner=8cpu-linux-x64,"run-id=${{ github.run_id }}"]
+
+    env:
+      PYTHONPATH: ./backend
+      REDIS_CLOUD_PYTEST_PASSWORD: ${{ secrets.REDIS_CLOUD_PYTEST_PASSWORD }}
+      
+    steps:
+    - name: Checkout code
+      uses: actions/checkout@v4
+
+    - name: Set up Python
+      uses: actions/setup-python@v5
+      with:
+        python-version: '3.11'
+        cache: 'pip'
+        cache-dependency-path: |
+          backend/requirements/default.txt
+          backend/requirements/dev.txt
+
+    - name: Install Dependencies
+      run: |
+        python -m pip install --upgrade pip
+        pip install --retries 5 --timeout 30 -r backend/requirements/default.txt
+        pip install --retries 5 --timeout 30 -r backend/requirements/dev.txt
+
+    - name: Run Tests
+      shell: script -q -e -c "bash --noprofile --norc -eo pipefail {0}"
+      run: py.test -o junit_family=xunit2 -xv --ff backend/tests/unit

.github/workflows/pr-quality-checks.yml

@@ -0,0 +1,23 @@
+name: Quality Checks PR
+concurrency:
+  group: Quality-Checks-PR-${{ github.workflow }}-${{ github.head_ref || github.event.workflow_run.head_branch || github.run_id }}
+  cancel-in-progress: true
+
+on:
+  merge_group:
+  pull_request: null
+
+jobs:
+  quality-checks:
+    # See https://runs-on.com/runners/linux/
+    runs-on: [runs-on,runner=8cpu-linux-x64,"run-id=${{ github.run_id }}"]
+    steps:
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+      - uses: pre-commit/action@v3.0.1
+        with:
+          extra_args: ${{ github.event_name == 'pull_request' && format('--from-ref {0} --to-ref {1}', github.event.pull_request.base.sha, github.event.pull_request.head.sha) || '' }}

.github/workflows/tag-nightly.yml

@@ -0,0 +1,53 @@
+name: Nightly Tag Push
+
+on:
+  schedule:
+    - cron: "0 10 * * *" # Runs every day at 2 AM PST / 3 AM PDT / 10 AM UTC
+
+permissions:
+  contents: write # Allows pushing tags to the repository
+
+jobs:
+  create-and-push-tag:
+    runs-on: [runs-on, runner=2cpu-linux-x64, "run-id=${{ github.run_id }}"]
+
+    steps:
+      # actions using GITHUB_TOKEN cannot trigger another workflow, but we do want this to trigger docker pushes
+      # see https://github.com/orgs/community/discussions/27028#discussioncomment-3254367 for the workaround we
+      # implement here which needs an actual user's deploy key
+      - name: Checkout code
+        uses: actions/checkout@v4
+        with:
+          ssh-key: "${{ secrets.RKUO_DEPLOY_KEY }}"
+
+      - name: Set up Git user
+        run: |
+          git config user.name "Richard Kuo [bot]"
+          git config user.email "rkuo[bot]@onyx.app"
+
+      - name: Check for existing nightly tag
+        id: check_tag
+        run: |
+          if git tag --points-at HEAD --list "nightly-latest*" | grep -q .; then
+            echo "A tag starting with 'nightly-latest' already exists on HEAD."
+            echo "tag_exists=true" >> $GITHUB_OUTPUT
+          else
+            echo "No tag starting with 'nightly-latest' exists on HEAD."
+            echo "tag_exists=false" >> $GITHUB_OUTPUT
+          fi
+
+      # don't tag again if HEAD already has a nightly-latest tag on it
+      - name: Create Nightly Tag
+        if: steps.check_tag.outputs.tag_exists == 'false'
+        env:
+          DATE: ${{ github.run_id }}
+        run: |
+          TAG_NAME="nightly-latest-$(date +'%Y%m%d')"
+          echo "Creating tag: $TAG_NAME"
+          git tag $TAG_NAME
+
+      - name: Push Tag
+        if: steps.check_tag.outputs.tag_exists == 'false'
+        run: |
+          TAG_NAME="nightly-latest-$(date +'%Y%m%d')"
+          git push origin $TAG_NAME

.gitignore

@@ -0,0 +1,12 @@
+.env
+.DS_store
+.venv
+.mypy_cache
+.idea
+/deployment/data/nginx/app.conf
+.vscode/
+*.sw?
+/backend/tests/regression/answer_quality/search_test_config.yaml
+/web/test-results/
+backend/onyx/agent_search/main/test_data.json
+backend/tests/regression/answer_quality/test_data.json

.pre-commit-config.yaml

@@ -0,0 +1,65 @@
+repos:
+  - repo: https://github.com/psf/black
+    rev: 23.3.0
+    hooks:
+    - id: black
+      language_version: python3.11
+
+  - repo: https://github.com/asottile/reorder_python_imports
+    rev: v3.9.0
+    hooks:
+    - id: reorder-python-imports
+      args: ['--py311-plus', '--application-directories=backend/']
+      # need to ignore alembic files, since reorder-python-imports gets confused
+      # and thinks that alembic is a local package since there is a folder
+      # in the backend directory called `alembic`
+      exclude: ^backend/alembic/
+
+  # These settings will remove unused imports with side effects
+  # Note: The repo currently does not and should not have imports with side effects
+  - repo: https://github.com/PyCQA/autoflake
+    rev: v2.2.0
+    hooks:
+      - id: autoflake
+        args: [ '--remove-all-unused-imports', '--remove-unused-variables', '--in-place' , '--recursive']
+
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    # Ruff version.
+    rev: v0.0.286
+    hooks:
+      - id: ruff
+  - repo: https://github.com/pre-commit/mirrors-prettier
+    rev: v3.1.0
+    hooks:
+    - id: prettier
+      types_or: [html, css, javascript, ts, tsx]
+      additional_dependencies:
+      - prettier
+
+  # We would like to have a mypy pre-commit hook, but due to the fact that
+  # pre-commit runs in it's own isolated environment, we would need to install
+  # and keep in sync all dependencies so mypy has access to the appropriate type
+  # stubs. This does not seem worth it at the moment, so for now we will stick to
+  # having mypy run via Github Actions / manually by contributors
+  # - repo: https://github.com/pre-commit/mirrors-mypy
+  #   rev: v1.1.1
+  #   hooks:
+  #     - id: mypy
+  #       exclude: ^tests/
+  #       # below are needed for type stubs since pre-commit runs in it's own
+  #       # isolated environment. Unfortunately, this needs to be kept in sync
+  #       # with requirements/dev.txt + requirements/default.txt
+  #       additional_dependencies: [
+  #         alembic==1.10.4,
+  #         types-beautifulsoup4==4.12.0.3,
+  #         types-html5lib==1.1.11.13,
+  #         types-oauthlib==3.2.0.9,
+  #         types-psycopg2==2.9.21.10,
+  #         types-python-dateutil==2.8.19.13,
+  #         types-regex==2023.3.23.1,
+  #         types-requests==2.28.11.17,
+  #         types-retry==0.9.9.3,
+  #         types-urllib3==1.26.25.11
+  #       ]
+  #       # TODO: add back once errors are addressed
+  #       # args: [--strict]

.prettierignore

@@ -0,0 +1 @@
+backend/tests/integration/tests/pruning/website

.vscode/env_template.txt

@@ -0,0 +1,60 @@
+# Copy this file to .env in the .vscode folder
+# Fill in the <REPLACE THIS> values as needed, it is recommended to set the GEN_AI_API_KEY value to avoid having to set up an LLM in the UI
+# Also check out danswer/backend/scripts/restart_containers.sh for a script to restart the containers which Danswer relies on outside of VSCode/Cursor processes
+
+# For local dev, often user Authentication is not needed
+AUTH_TYPE=disabled
+
+# Skip warm up for dev
+SKIP_WARM_UP=True
+
+# Always keep these on for Dev
+# Logs all model prompts to stdout
+LOG_DANSWER_MODEL_INTERACTIONS=True
+# More verbose logging
+LOG_LEVEL=debug
+
+
+# This passes top N results to LLM an additional time for reranking prior to answer generation
+# This step is quite heavy on token usage so we disable it for dev generally
+DISABLE_LLM_DOC_RELEVANCE=False
+
+
+# Useful if you want to toggle auth on/off (google_oauth/OIDC specifically)
+OAUTH_CLIENT_ID=<REPLACE THIS>
+OAUTH_CLIENT_SECRET=<REPLACE THIS>
+# Generally not useful for dev, we don't generally want to set up an SMTP server for dev
+REQUIRE_EMAIL_VERIFICATION=False
+
+
+# Set these so if you wipe the DB, you don't end up having to go through the UI every time
+GEN_AI_API_KEY=<REPLACE THIS>
+OPENAI_API_KEY=<REPLACE THIS>
+# If answer quality isn't important for dev, use gpt-4o-mini since it's cheaper
+GEN_AI_MODEL_VERSION=gpt-4o
+FAST_GEN_AI_MODEL_VERSION=gpt-4o
+
+# For Danswer Slack Bot, overrides the UI values so no need to set this up via UI every time
+# Only needed if using DanswerBot
+#DANSWER_BOT_SLACK_APP_TOKEN=<REPLACE THIS>
+#DANSWER_BOT_SLACK_BOT_TOKEN=<REPLACE THIS>
+
+
+# Python stuff
+PYTHONPATH=../backend
+PYTHONUNBUFFERED=1
+
+
+# Internet Search 
+BING_API_KEY=<REPLACE THIS>
+
+
+# Enable the full set of Danswer Enterprise Edition features
+# NOTE: DO NOT ENABLE THIS UNLESS YOU HAVE A PAID ENTERPRISE LICENSE (or if you are using this for local testing/development)
+ENABLE_PAID_ENTERPRISE_EDITION_FEATURES=False
+
+# Agent Search configs  # TODO: Remove give proper namings
+AGENT_RETRIEVAL_STATS=False   # Note: This setting will incur substantial re-ranking effort
+AGENT_RERANKING_STATS=True
+AGENT_MAX_QUERY_RETRIEVAL_RESULTS=20
+AGENT_RERANKING_MAX_QUERY_RETRIEVAL_RESULTS=20

.vscode/launch.template.jsonc

@@ -0,0 +1,401 @@
+/* Copy this file into '.vscode/launch.json' or merge its contents into your existing configurations. */
+
+{
+    // Use IntelliSense to learn about possible attributes.
+    // Hover to view descriptions of existing attributes.
+    // For more information, visit: https://go.microsoft.com/fwlink/?linkid=830387
+    "version": "0.2.0",
+    "compounds": [
+		{
+			// Dummy entry used to label the group
+			"name": "--- Compound ---",
+		  	"configurations": [
+		  		"--- Individual ---"
+		  	],
+			"presentation": {
+				 "group": "1",
+			 }
+		},
+        {
+            "name": "Run All Onyx Services",
+            "configurations": [
+                "Web Server",
+                "Model Server",
+                "API Server",
+                "Slack Bot",
+		  		"Celery primary", 
+		  		"Celery light", 
+		  		"Celery heavy", 
+		  		"Celery indexing", 
+		  		"Celery beat",
+                "Celery monitoring",
+            ],
+			"presentation": {
+				 "group": "1",
+			 }
+        },
+		{
+			"name": "Web / Model / API",
+		  	"configurations": [
+		  		"Web Server", 
+		  		"Model Server", 
+		  		"API Server",
+		  	],
+			"presentation": {
+				 "group": "1",
+			 }
+		},
+		{
+			"name": "Celery (all)",
+		  	"configurations": [
+		  		"Celery primary", 
+		  		"Celery light", 
+		  		"Celery heavy", 
+		  		"Celery indexing", 
+		  		"Celery beat",
+                "Celery monitoring",
+		  	],
+			"presentation": {
+				 "group": "1",
+			 }
+		}
+    ],
+    "configurations": [
+		{
+	    	// Dummy entry used to label the group
+			"name": "--- Individual ---",
+			"type": "node",
+			"request": "launch",
+			"presentation": {
+				"group": "2",
+				"order": 0
+			}
+		},
+        {
+            "name": "Web Server",
+            "type": "node",
+            "request": "launch",
+            "cwd": "${workspaceRoot}/web",
+            "runtimeExecutable": "npm",
+            "envFile": "${workspaceFolder}/.vscode/.env",
+            "runtimeArgs": [
+                "run", "dev"
+            ],
+            "presentation": {
+				 "group": "2",
+			 },
+            "console": "integratedTerminal",
+            "consoleTitle": "Web Server Console"
+        },
+        {
+            "name": "Model Server",
+            "consoleName": "Model Server",
+            "type": "debugpy",
+            "request": "launch",
+            "module": "uvicorn",
+            "cwd": "${workspaceFolder}/backend",
+            "envFile": "${workspaceFolder}/.vscode/.env",
+            "env": {
+                "LOG_LEVEL": "DEBUG",
+                "PYTHONUNBUFFERED": "1"
+            },
+            "args": [
+                "model_server.main:app",
+                "--reload",
+                "--port",
+                "9000"
+            ],
+            "presentation": {
+				 "group": "2",
+			},
+            "consoleTitle": "Model Server Console"
+        },
+        {
+            "name": "API Server",
+            "consoleName": "API Server",
+            "type": "debugpy",
+            "request": "launch",
+            "module": "uvicorn",
+            "cwd": "${workspaceFolder}/backend",
+            "envFile": "${workspaceFolder}/.vscode/.env",
+            "env": {
+                "LOG_DANSWER_MODEL_INTERACTIONS": "True",
+                "LOG_LEVEL": "DEBUG",
+                "PYTHONUNBUFFERED": "1"
+            },
+            "args": [
+                "onyx.main:app",
+                "--reload",
+                "--port",
+                "8080"
+            ],
+            "presentation": {
+				 "group": "2",
+			 },
+            "consoleTitle": "API Server Console"
+        },
+        // For the listener to access the Slack API,
+        // DANSWER_BOT_SLACK_APP_TOKEN & DANSWER_BOT_SLACK_BOT_TOKEN need to be set in .env file located in the root of the project
+        {
+            "name": "Slack Bot",
+            "consoleName": "Slack Bot",
+            "type": "debugpy",
+            "request": "launch",
+            "program": "onyx/onyxbot/slack/listener.py",
+            "cwd": "${workspaceFolder}/backend",
+            "envFile": "${workspaceFolder}/.vscode/.env",
+            "env": {
+                "LOG_LEVEL": "DEBUG",
+                "PYTHONUNBUFFERED": "1",
+                "PYTHONPATH": "."
+            },
+            "presentation": {
+				 "group": "2",
+			},
+            "consoleTitle": "Slack Bot Console"
+        },
+        {
+            "name": "Celery primary",
+            "type": "debugpy",
+            "request": "launch",
+            "module": "celery",
+            "cwd": "${workspaceFolder}/backend",
+            "envFile": "${workspaceFolder}/.vscode/.env",
+            "env": {
+                "LOG_LEVEL": "INFO",
+                "PYTHONUNBUFFERED": "1",
+                "PYTHONPATH": "."
+            },
+            "args": [
+                "-A",
+                "onyx.background.celery.versioned_apps.primary",
+                "worker",
+                "--pool=threads",
+                "--concurrency=4",
+                "--prefetch-multiplier=1",
+                "--loglevel=INFO",
+                "--hostname=primary@%n",
+                "-Q",
+                "celery",
+            ],
+            "presentation": {
+				 "group": "2",
+			 },
+            "consoleTitle": "Celery primary Console"
+        },
+        {
+            "name": "Celery light",
+            "type": "debugpy",
+            "request": "launch",
+            "module": "celery",
+            "cwd": "${workspaceFolder}/backend",
+            "envFile": "${workspaceFolder}/.vscode/.env",
+            "env": {
+                "LOG_LEVEL": "INFO",
+                "PYTHONUNBUFFERED": "1",
+                "PYTHONPATH": "."
+            },
+            "args": [
+                "-A",
+                "onyx.background.celery.versioned_apps.light",
+                "worker",
+                "--pool=threads",
+                "--concurrency=64",
+                "--prefetch-multiplier=8",
+                "--loglevel=INFO",
+                "--hostname=light@%n",
+                "-Q",
+                "vespa_metadata_sync,connector_deletion,doc_permissions_upsert,checkpoint_cleanup",
+            ],
+            "presentation": {
+				 "group": "2",
+			 },
+            "consoleTitle": "Celery light Console"
+        },
+        {
+            "name": "Celery heavy",
+            "type": "debugpy",
+            "request": "launch",
+            "module": "celery",
+            "cwd": "${workspaceFolder}/backend",
+            "envFile": "${workspaceFolder}/.vscode/.env",
+            "env": {
+                "LOG_LEVEL": "INFO",
+                "PYTHONUNBUFFERED": "1",
+                "PYTHONPATH": "."
+            },
+            "args": [
+                "-A",
+                "onyx.background.celery.versioned_apps.heavy",
+                "worker",
+                "--pool=threads",
+                "--concurrency=4",
+                "--prefetch-multiplier=1",
+                "--loglevel=INFO",
+                "--hostname=heavy@%n",
+                "-Q",
+                "connector_pruning,connector_doc_permissions_sync,connector_external_group_sync",
+            ],
+            "presentation": {
+				 "group": "2",
+			 },
+            "consoleTitle": "Celery heavy Console"
+        },
+        {
+            "name": "Celery indexing",
+            "type": "debugpy",
+            "request": "launch",
+            "module": "celery",
+            "cwd": "${workspaceFolder}/backend",
+            "envFile": "${workspaceFolder}/.vscode/.env",
+            "env": {
+                "ENABLE_MULTIPASS_INDEXING": "false",
+                "LOG_LEVEL": "DEBUG",
+                "PYTHONUNBUFFERED": "1",
+                "PYTHONPATH": "."
+            },
+            "args": [
+                "-A",
+                "onyx.background.celery.versioned_apps.indexing",
+                "worker",
+                "--pool=threads",
+                "--concurrency=1",
+                "--prefetch-multiplier=1",
+                "--loglevel=INFO",
+                "--hostname=indexing@%n",
+                "-Q",
+                "connector_indexing",
+            ],
+            "presentation": {
+				 "group": "2",
+			 },
+            "consoleTitle": "Celery indexing Console"
+        },
+        {
+            "name": "Celery monitoring",
+            "type": "debugpy",
+            "request": "launch",
+            "module": "celery",
+            "cwd": "${workspaceFolder}/backend",
+            "envFile": "${workspaceFolder}/.vscode/.env",
+            "env": {},
+            "args": [
+                "-A",
+                "onyx.background.celery.versioned_apps.monitoring",
+                "worker",
+                "--pool=solo",
+                "--concurrency=1",
+                "--prefetch-multiplier=1",
+                "--loglevel=INFO",
+                "--hostname=monitoring@%n",
+                "-Q",
+                "monitoring",
+            ],
+            "presentation": {
+				 "group": "2",
+			 },
+            "consoleTitle": "Celery monitoring Console"
+        },
+        {
+            "name": "Celery beat",
+            "type": "debugpy",
+            "request": "launch",
+            "module": "celery",
+            "cwd": "${workspaceFolder}/backend",
+            "envFile": "${workspaceFolder}/.vscode/.env",
+            "env": {
+                "LOG_LEVEL": "DEBUG",
+                "PYTHONUNBUFFERED": "1",
+                "PYTHONPATH": "."
+            },
+            "args": [
+                "-A",
+                "onyx.background.celery.versioned_apps.beat",
+                "beat",
+                "--loglevel=INFO",
+            ],
+            "presentation": {
+				 "group": "2",
+			 },
+            "consoleTitle": "Celery beat Console"
+        },
+        {
+            "name": "Pytest",
+            "consoleName": "Pytest",
+            "type": "debugpy",
+            "request": "launch",
+            "module": "pytest",
+            "cwd": "${workspaceFolder}/backend",
+            "envFile": "${workspaceFolder}/.vscode/.env",
+            "env": {
+                "LOG_LEVEL": "DEBUG",
+                "PYTHONUNBUFFERED": "1",
+                "PYTHONPATH": "."
+            },
+            "args": [
+                "-v"
+                // Specify a sepcific module/test to run or provide nothing to run all tests
+                //"tests/unit/onyx/llm/answering/test_prune_and_merge.py"
+            ],
+            "presentation": {
+				 "group": "2",
+			 },
+            "consoleTitle": "Pytest Console"
+        },
+		{
+	    	// Dummy entry used to label the group
+			"name": "--- Tasks ---",
+			"type": "node",
+			"request": "launch",
+			"presentation": {
+				"group": "3",
+				"order": 0
+			}
+		},
+        {
+            "name": "Clear and Restart External Volumes and Containers",
+            "type": "node",
+            "request": "launch",
+            "runtimeExecutable": "bash",
+            "runtimeArgs": ["${workspaceFolder}/backend/scripts/restart_containers.sh"],
+            "cwd": "${workspaceFolder}",
+            "console": "integratedTerminal",
+            "stopOnEntry": true,
+            "presentation": {
+				 "group": "3",
+			 },
+        },
+        {
+	        // Celery jobs launched through a single background script (legacy)
+	        // Recommend using the "Celery (all)" compound launch instead.
+            "name": "Background Jobs",
+            "consoleName": "Background Jobs",
+            "type": "debugpy",
+            "request": "launch",
+            "program": "scripts/dev_run_background_jobs.py",
+            "cwd": "${workspaceFolder}/backend",
+            "envFile": "${workspaceFolder}/.vscode/.env",
+            "env": {
+                "LOG_DANSWER_MODEL_INTERACTIONS": "True",
+                "LOG_LEVEL": "DEBUG",
+                "PYTHONUNBUFFERED": "1",
+                "PYTHONPATH": "."
+            },
+        },
+        {
+            "name": "Install Python Requirements",
+            "type": "node",
+            "request": "launch",
+            "runtimeExecutable": "bash",
+            "runtimeArgs": [
+                "-c",
+                "pip install -r backend/requirements/default.txt && pip install -r backend/requirements/dev.txt && pip install -r backend/requirements/ee.txt && pip install -r backend/requirements/model_server.txt"
+            ],
+            "cwd": "${workspaceFolder}",
+            "console": "integratedTerminal",
+            "presentation": {
+                 "group": "3"
+            }
+        },
+    ]
+}

CONTRIBUTING.md

@@ -0,0 +1,276 @@
+<!-- DANSWER_METADATA={"link": "https://github.com/onyx-dot-app/onyx/blob/main/CONTRIBUTING.md"} -->
+
+# Contributing to Onyx
+
+Hey there! We are so excited that you're interested in Onyx.
+
+As an open source project in a rapidly changing space, we welcome all contributions.
+
+## 💃 Guidelines
+
+### Contribution Opportunities
+
+The [GitHub Issues](https://github.com/onyx-dot-app/onyx/issues) page is a great place to start for contribution ideas.
+
+To ensure that your contribution is aligned with the project's direction, please reach out to Hagen (or any other maintainer) on the Onyx team
+via [Slack](https://join.slack.com/t/onyx-dot-app/shared_invite/zt-2twesxdr6-5iQitKZQpgq~hYIZ~dv3KA) /
+[Discord](https://discord.gg/TDJ59cGV2X) or [email](mailto:founders@onyx.app).
+
+Issues that have been explicitly approved by the maintainers (aligned with the direction of the project)
+will be marked with the `approved by maintainers` label.
+Issues marked `good first issue` are an especially great place to start.
+
+**Connectors** to other tools are another great place to contribute. For details on how, refer to this
+[README.md](https://github.com/onyx-dot-app/onyx/blob/main/backend/onyx/connectors/README.md).
+
+If you have a new/different contribution in mind, we'd love to hear about it!
+Your input is vital to making sure that Onyx moves in the right direction.
+Before starting on implementation, please raise a GitHub issue.
+
+Also, always feel free to message the founders (Chris Weaver / Yuhong Sun) on
+[Slack](https://join.slack.com/t/onyx-dot-app/shared_invite/zt-2twesxdr6-5iQitKZQpgq~hYIZ~dv3KA) /
+[Discord](https://discord.gg/TDJ59cGV2X) directly about anything at all.
+
+### Contributing Code
+
+To contribute to this project, please follow the
+["fork and pull request"](https://docs.github.com/en/get-started/quickstart/contributing-to-projects) workflow.
+When opening a pull request, mention related issues and feel free to tag relevant maintainers.
+
+Before creating a pull request please make sure that the new changes conform to the formatting and linting requirements.
+See the [Formatting and Linting](#formatting-and-linting) section for how to run these checks locally.
+
+### Getting Help 🙋
+
+Our goal is to make contributing as easy as possible. If you run into any issues please don't hesitate to reach out.
+That way we can help future contributors and users can avoid the same issue.
+
+We also have support channels and generally interesting discussions on our
+[Slack](https://join.slack.com/t/onyx-dot-app/shared_invite/zt-2twesxdr6-5iQitKZQpgq~hYIZ~dv3KA)
+and
+[Discord](https://discord.gg/TDJ59cGV2X).
+
+We would love to see you there!
+
+## Get Started 🚀
+
+Onyx being a fully functional app, relies on some external software, specifically:
+
+- [Postgres](https://www.postgresql.org/) (Relational DB)
+- [Vespa](https://vespa.ai/) (Vector DB/Search Engine)
+- [Redis](https://redis.io/) (Cache)
+- [Nginx](https://nginx.org/) (Not needed for development flows generally)
+
+> **Note:**
+> This guide provides instructions to build and run Onyx locally from source with Docker containers providing the above external software. We believe this combination is easier for
+> development purposes. If you prefer to use pre-built container images, we provide instructions on running the full Onyx stack within Docker below.
+
+### Local Set Up
+
+Be sure to use Python version 3.11. For instructions on installing Python 3.11 on macOS, refer to the [CONTRIBUTING_MACOS.md](./CONTRIBUTING_MACOS.md) readme.
+
+If using a lower version, modifications will have to be made to the code.
+If using a higher version, sometimes some libraries will not be available (i.e. we had problems with Tensorflow in the past with higher versions of python).
+
+#### Backend: Python requirements
+
+Currently, we use pip and recommend creating a virtual environment.
+
+For convenience here's a command for it:
+
+```bash
+python -m venv .venv
+source .venv/bin/activate
+```
+
+> **Note:**
+> This virtual environment MUST NOT be set up WITHIN the onyx directory if you plan on using mypy within certain IDEs.
+> For simplicity, we recommend setting up the virtual environment outside of the onyx directory.
+
+_For Windows, activate the virtual environment using Command Prompt:_
+
+```bash
+.venv\Scripts\activate
+```
+
+If using PowerShell, the command slightly differs:
+
+```powershell
+.venv\Scripts\Activate.ps1
+```
+
+Install the required python dependencies:
+
+```bash
+pip install -r onyx/backend/requirements/default.txt
+pip install -r onyx/backend/requirements/dev.txt
+pip install -r onyx/backend/requirements/ee.txt
+pip install -r onyx/backend/requirements/model_server.txt
+```
+
+Install Playwright for Python (headless browser required by the Web Connector)
+
+In the activated Python virtualenv, install Playwright for Python by running:
+
+```bash
+playwright install
+```
+
+You may have to deactivate and reactivate your virtualenv for `playwright` to appear on your path.
+
+#### Frontend: Node dependencies
+
+Install [Node.js and npm](https://docs.npmjs.com/downloading-and-installing-node-js-and-npm) for the frontend.
+Once the above is done, navigate to `onyx/web` run:
+
+```bash
+npm i
+```
+
+## Formatting and Linting
+
+### Backend
+
+For the backend, you'll need to setup pre-commit hooks (black / reorder-python-imports).
+First, install pre-commit (if you don't have it already) following the instructions
+[here](https://pre-commit.com/#installation).
+
+With the virtual environment active, install the pre-commit library with:
+
+```bash
+pip install pre-commit
+```
+
+Then, from the `onyx/backend` directory, run:
+
+```bash
+pre-commit install
+```
+
+Additionally, we use `mypy` for static type checking.
+Onyx is fully type-annotated, and we want to keep it that way!
+To run the mypy checks manually, run `python -m mypy .` from the `onyx/backend` directory.
+
+### Web
+
+We use `prettier` for formatting. The desired version (2.8.8) will be installed via a `npm i` from the `onyx/web` directory.
+To run the formatter, use `npx prettier --write .` from the `onyx/web` directory.
+Please double check that prettier passes before creating a pull request.
+
+# Running the application for development
+
+## Developing using VSCode Debugger (recommended)
+
+We highly recommend using VSCode debugger for development.
+See [CONTRIBUTING_VSCODE.md](./CONTRIBUTING_VSCODE.md) for more details.
+
+Otherwise, you can follow the instructions below to run the application for development.
+
+## Manually running the application for development
+### Docker containers for external software
+
+You will need Docker installed to run these containers.
+
+First navigate to `onyx/deployment/docker_compose`, then start up Postgres/Vespa/Redis with:
+
+```bash
+docker compose -f docker-compose.dev.yml -p onyx-stack up -d index relational_db cache
+```
+
+(index refers to Vespa, relational_db refers to Postgres, and cache refers to Redis)
+
+### Running Onyx locally
+
+To start the frontend, navigate to `onyx/web` and run:
+
+```bash
+npm run dev
+```
+
+Next, start the model server which runs the local NLP models.
+Navigate to `onyx/backend` and run:
+
+```bash
+uvicorn model_server.main:app --reload --port 9000
+```
+
+_For Windows (for compatibility with both PowerShell and Command Prompt):_
+
+```bash
+powershell -Command "uvicorn model_server.main:app --reload --port 9000"
+```
+
+The first time running Onyx, you will need to run the DB migrations for Postgres.
+After the first time, this is no longer required unless the DB models change.
+
+Navigate to `onyx/backend` and with the venv active, run:
+
+```bash
+alembic upgrade head
+```
+
+Next, start the task queue which orchestrates the background jobs.
+Jobs that take more time are run async from the API server.
+
+Still in `onyx/backend`, run:
+
+```bash
+python ./scripts/dev_run_background_jobs.py
+```
+
+To run the backend API server, navigate back to `onyx/backend` and run:
+
+```bash
+AUTH_TYPE=disabled uvicorn onyx.main:app --reload --port 8080
+```
+
+_For Windows (for compatibility with both PowerShell and Command Prompt):_
+
+```bash
+powershell -Command "
+    $env:AUTH_TYPE='disabled'
+    uvicorn onyx.main:app --reload --port 8080
+"
+```
+
+> **Note:**
+> If you need finer logging, add the additional environment variable `LOG_LEVEL=DEBUG` to the relevant services.
+
+#### Wrapping up
+
+You should now have 4 servers running:
+
+- Web server
+- Backend API
+- Model server
+- Background jobs
+
+Now, visit `http://localhost:3000` in your browser. You should see the Onyx onboarding wizard where you can connect your external LLM provider to Onyx.
+
+You've successfully set up a local Onyx instance! 🏁
+
+#### Running the Onyx application in a container
+
+You can run the full Onyx application stack from pre-built images including all external software dependencies.
+
+Navigate to `onyx/deployment/docker_compose` and run:
+
+```bash
+docker compose -f docker-compose.dev.yml -p onyx-stack up -d
+```
+
+After Docker pulls and starts these containers, navigate to `http://localhost:3000` to use Onyx.
+
+If you want to make changes to Onyx and run those changes in Docker, you can also build a local version of the Onyx container images that incorporates your changes like so:
+
+```bash
+docker compose -f docker-compose.dev.yml -p onyx-stack up -d --build
+```
+
+
+### Release Process
+
+Onyx loosely follows the SemVer versioning standard.
+Major changes are released with a "minor" version bump. Currently we use patch release versions to indicate small feature changes.
+A set of Docker containers will be pushed automatically to DockerHub with every tag.
+You can see the containers [here](https://hub.docker.com/search?q=onyx%2F).

CONTRIBUTING_MACOS.md

@@ -0,0 +1,36 @@
+## Some additional notes for Mac Users
+
+The base instructions to set up the development environment are located in [CONTRIBUTING.md](https://github.com/onyx-dot-app/onyx/blob/main/CONTRIBUTING.md).
+
+### Setting up Python
+
+Ensure [Homebrew](https://brew.sh/) is already set up.
+
+Then install python 3.11.
+
+```bash
+brew install python@3.11
+```
+
+Add python 3.11 to your path: add the following line to ~/.zshrc
+
+```
+export PATH="$(brew --prefix)/opt/python@3.11/libexec/bin:$PATH"
+```
+
+> **Note:**
+> You will need to open a new terminal for the path change above to take effect.
+
+### Setting up Docker
+
+On macOS, you will need to install [Docker Desktop](https://www.docker.com/products/docker-desktop/) and
+ensure it is running before continuing with the docker commands.
+
+### Formatting and Linting
+
+MacOS will likely require you to remove some quarantine attributes on some of the hooks for them to execute properly.
+After installing pre-commit, run the following command:
+
+```bash
+sudo xattr -r -d com.apple.quarantine ~/.cache/pre-commit
+```

CONTRIBUTING_VSCODE.md

@@ -0,0 +1,30 @@
+# VSCode Debugging Setup
+
+This guide explains how to set up and use VSCode's debugging capabilities with this project.
+
+## Initial Setup
+
+1. **Environment Setup**:
+   - Copy `.vscode/.env.template` to `.vscode/.env`
+   - Fill in the necessary environment variables in `.vscode/.env`
+2. **launch.json**:
+   - Copy `.vscode/launch.template.jsonc` to `.vscode/launch.json`
+
+## Using the Debugger
+
+Before starting, make sure the Docker Daemon is running.
+
+1. Open the Debug view in VSCode (Cmd+Shift+D on macOS)
+2. From the dropdown at the top, select "Clear and Restart External Volumes and Containers" and press the green play button
+3. From the dropdown at the top, select "Run All Onyx Services" and press the green play button
+4. CD into web, run "npm i" followed by npm run dev.
+5. Now, you can navigate to onyx in your browser (default is http://localhost:3000) and start using the app
+6. You can set breakpoints by clicking to the left of line numbers to help debug while the app is running
+7. Use the debug toolbar to step through code, inspect variables, etc.
+
+## Features
+
+- Hot reload is enabled for the web server and API servers
+- Python debugging is configured with debugpy
+- Environment variables are loaded from `.vscode/.env`
+- Console output is organized in the integrated terminal with labeled tabs

LICENSE

@@ -1,661 +1,25 @@
-                    GNU AFFERO GENERAL PUBLIC LICENSE
-                       Version 3, 19 November 2007
-
- Copyright (C) 2007 Free Software Foundation, Inc. <https://fsf.org/>
- Everyone is permitted to copy and distribute verbatim copies
- of this license document, but changing it is not allowed.
-
-                            Preamble
-
-  The GNU Affero General Public License is a free, copyleft license for
-software and other kinds of works, specifically designed to ensure
-cooperation with the community in the case of network server software.
-
-  The licenses for most software and other practical works are designed
-to take away your freedom to share and change the works.  By contrast,
-our General Public Licenses are intended to guarantee your freedom to
-share and change all versions of a program--to make sure it remains free
-software for all its users.
-
-  When we speak of free software, we are referring to freedom, not
-price.  Our General Public Licenses are designed to make sure that you
-have the freedom to distribute copies of free software (and charge for
-them if you wish), that you receive source code or can get it if you
-want it, that you can change the software or use pieces of it in new
-free programs, and that you know you can do these things.
-
-  Developers that use our General Public Licenses protect your rights
-with two steps: (1) assert copyright on the software, and (2) offer
-you this License which gives you legal permission to copy, distribute
-and/or modify the software.
-
-  A secondary benefit of defending all users' freedom is that
-improvements made in alternate versions of the program, if they
-receive widespread use, become available for other developers to
-incorporate.  Many developers of free software are heartened and
-encouraged by the resulting cooperation.  However, in the case of
-software used on network servers, this result may fail to come about.
-The GNU General Public License permits making a modified version and
-letting the public access it on a server without ever releasing its
-source code to the public.
-
-  The GNU Affero General Public License is designed specifically to
-ensure that, in such cases, the modified source code becomes available
-to the community.  It requires the operator of a network server to
-provide the source code of the modified version running there to the
-users of that server.  Therefore, public use of a modified version, on
-a publicly accessible server, gives the public access to the source
-code of the modified version.
-
-  An older license, called the Affero General Public License and
-published by Affero, was designed to accomplish similar goals.  This is
-a different license, not a version of the Affero GPL, but Affero has
-released a new version of the Affero GPL which permits relicensing under
-this license.
-
-  The precise terms and conditions for copying, distribution and
-modification follow.
-
-                       TERMS AND CONDITIONS
-
-  0. Definitions.
-
-  "This License" refers to version 3 of the GNU Affero General Public License.
-
-  "Copyright" also means copyright-like laws that apply to other kinds of
-works, such as semiconductor masks.
-
-  "The Program" refers to any copyrightable work licensed under this
-License.  Each licensee is addressed as "you".  "Licensees" and
-"recipients" may be individuals or organizations.
-
-  To "modify" a work means to copy from or adapt all or part of the work
-in a fashion requiring copyright permission, other than the making of an
-exact copy.  The resulting work is called a "modified version" of the
-earlier work or a work "based on" the earlier work.
-
-  A "covered work" means either the unmodified Program or a work based
-on the Program.
-
-  To "propagate" a work means to do anything with it that, without
-permission, would make you directly or secondarily liable for
-infringement under applicable copyright law, except executing it on a
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-
-  An interactive user interface displays "Appropriate Legal Notices"
-to the extent that it includes a convenient and prominently visible
-feature that (1) displays an appropriate copyright notice, and (2)
-tells the user that there is no warranty for the work (except to the
-extent that warranties are provided), that licensees may convey the
-work under this License, and how to view a copy of this License.  If
-the interface presents a list of user commands or options, such as a
-menu, a prominent item in the list meets this criterion.
-
-  1. Source Code.
-
-  The "source code" for a work means the preferred form of the work
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+Copyright (c) 2023-present DanswerAI, Inc.
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+Portions of this software are licensed as follows:
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README.md

@@ -0,0 +1,117 @@
+<!-- DANSWER_METADATA={"link": "https://github.com/onyx-dot-app/onyx/blob/main/README.md"} -->
+
+<a name="readme-top"></a>
+
+<h2 align="center">
+<a href="https://www.onyx.app/"> <img width="50%" src="https://github.com/onyx-dot-app/onyx/blob/logo/OnyxLogoCropped.jpg?raw=true)" /></a>
+</h2>
+
+<p align="center">
+<p align="center">Open Source Gen-AI + Enterprise Search.</p>
+
+<p align="center">
+<a href="https://docs.onyx.app/" target="_blank">
+    <img src="https://img.shields.io/badge/docs-view-blue" alt="Documentation">
+</a>
+<a href="https://join.slack.com/t/onyx-dot-app/shared_invite/zt-2twesxdr6-5iQitKZQpgq~hYIZ~dv3KA" target="_blank">
+    <img src="https://img.shields.io/badge/slack-join-blue.svg?logo=slack" alt="Slack">
+</a>
+<a href="https://discord.gg/TDJ59cGV2X" target="_blank">
+    <img src="https://img.shields.io/badge/discord-join-blue.svg?logo=discord&logoColor=white" alt="Discord">
+</a>
+<a href="https://github.com/onyx-dot-app/onyx/blob/main/README.md" target="_blank">
+    <img src="https://img.shields.io/static/v1?label=license&message=MIT&color=blue" alt="License">
+</a>
+</p>
+
+<strong>[Onyx](https://www.onyx.app/)</strong> (formerly Danswer) is the AI platform connected to your company's docs, apps, and people.
+Onyx provides a feature rich Chat interface and plugs into any LLM of your choice.
+Keep knowledge and access controls sync-ed across over 40 connectors like Google Drive, Slack, Confluence, Salesforce, etc.
+Create custom AI agents with unique prompts, knowledge, and actions that the agents can take.
+Onyx can be deployed securely anywhere and for any scale - on a laptop, on-premise, or to cloud.
+
+
+<h3>Feature Highlights</h3>
+
+**Deep research over your team's knowledge:**
+
+https://private-user-images.githubusercontent.com/32520769/414509312-48392e83-95d0-4fb5-8650-a396e05e0a32.mp4?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.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.a9D8A0sgKE9AoaoE-mfFbJ6_OKYeqaf7TZ4Han2JfW8
+
+
+**Use Onyx as a secure AI Chat with any LLM:**
+
+![Onyx Chat Silent Demo](https://github.com/onyx-dot-app/onyx/releases/download/v0.21.1/OnyxChatSilentDemo.gif)
+
+
+**Easily set up connectors to your apps:**
+
+![Onyx Connector Silent Demo](https://github.com/onyx-dot-app/onyx/releases/download/v0.21.1/OnyxConnectorSilentDemo.gif)
+
+
+**Access Onyx where your team already works:**
+
+![Onyx Bot Demo](https://github.com/onyx-dot-app/onyx/releases/download/v0.21.1/OnyxBot.png)
+
+
+## Deployment
+**To try it out for free and get started in seconds, check out [Onyx Cloud](https://cloud.onyx.app/signup)**.
+
+Onyx can also be run locally (even on a laptop) or deployed on a virtual machine with a single
+`docker compose` command. Checkout our [docs](https://docs.onyx.app/quickstart) to learn more.
+
+We also have built-in support for high-availability/scalable deployment on Kubernetes.
+References [here](https://github.com/onyx-dot-app/onyx/tree/main/deployment).
+
+
+## 🔍 Other Notable Benefits of Onyx
+- Custom deep learning models for indexing and inference time, only through Onyx + learning from user feedback.
+- Flexible security features like SSO (OIDC/SAML/OAuth2), RBAC, encryption of credentials, etc.
+- Knowledge curation features like document-sets, query history, usage analytics, etc.
+- Scalable deployment options tested up to many tens of thousands users and hundreds of millions of documents.
+
+
+## 🚧 Roadmap
+- New methods in information retrieval (StructRAG, LightGraphRAG, etc.)
+- Personalized Search
+- Organizational understanding and ability to locate and suggest experts from your team.
+- Code Search
+- SQL and Structured Query Language
+
+
+## 🔌 Connectors
+Keep knowledge and access up to sync across 40+ connectors:
+
+- Google Drive
+- Confluence
+- Slack
+- Gmail
+- Salesforce
+- Microsoft Sharepoint
+- Github
+- Jira
+- Zendesk
+- Gong
+- Microsoft Teams
+- Dropbox
+- Local Files
+- Websites
+- And more ...
+
+See the full list [here](https://docs.onyx.app/connectors).
+
+
+## 📚 Licensing
+There are two editions of Onyx:
+
+- Onyx Community Edition (CE) is available freely under the MIT Expat license. Simply follow the Deployment guide above.
+- Onyx Enterprise Edition (EE) includes extra features that are primarily useful for larger organizations.
+For feature details, check out [our website](https://www.onyx.app/pricing).
+
+To try the Onyx Enterprise Edition:
+1. Checkout [Onyx Cloud](https://cloud.onyx.app/signup).
+2. For self-hosting the Enterprise Edition, contact us at [founders@onyx.app](mailto:founders@onyx.app) or book a call with us on our [Cal](https://cal.com/team/onyx/founders).
+
+
+## 💡 Contributing
+Looking to contribute? Please check out the [Contribution Guide](CONTRIBUTING.md) for more details.
+

backend/.dockerignore

@@ -0,0 +1,17 @@
+**/__pycache__
+venv/
+env/
+*.egg-info
+.cache
+.git/
+.svn/
+.vscode/
+.idea/
+*.log
+log/
+.env
+secrets.yaml
+build/
+dist/
+.coverage
+htmlcov/

backend/.gitignore

@@ -0,0 +1,12 @@
+__pycache__/
+.mypy_cache
+.idea/
+site_crawls/
+.ipynb_checkpoints/
+api_keys.py
+*ipynb
+.env*
+vespa-app.zip
+dynamic_config_storage/
+celerybeat-schedule*
+onyx/connectors/salesforce/data/

backend/.trivyignore

@@ -0,0 +1,46 @@
+# https://github.com/madler/zlib/issues/868
+# Pulled in with base Debian image, it's part of the contrib folder but unused
+# zlib1g is fine
+# Will be gone with Debian image upgrade
+# No impact in our settings
+CVE-2023-45853
+
+# krb5 related, worst case is denial of service by resource exhaustion
+# Accept the risk
+CVE-2024-26458
+CVE-2024-26461
+CVE-2024-26462
+CVE-2024-26458
+CVE-2024-26461
+CVE-2024-26462
+CVE-2024-26458
+CVE-2024-26461
+CVE-2024-26462
+CVE-2024-26458
+CVE-2024-26461
+CVE-2024-26462
+
+# Specific to Firefox which we do not use
+# No impact in our settings
+CVE-2024-0743
+
+# bind9 related, worst case is denial of service by CPU resource exhaustion
+# Accept the risk
+CVE-2023-50387
+CVE-2023-50868
+CVE-2023-50387
+CVE-2023-50868
+
+# libexpat1, XML parsing resource exhaustion
+# We don't parse any user provided XMLs
+# No impact in our settings
+CVE-2023-52425
+CVE-2024-28757
+
+# sqlite, only used by NLTK library to grab word lemmatizer and stopwords
+# No impact in our settings
+CVE-2023-7104
+
+# libharfbuzz0b, O(n^2) growth, worst case is denial of service
+# Accept the risk
+CVE-2023-25193

backend/Dockerfile

@@ -0,0 +1,118 @@
+FROM python:3.11.7-slim-bookworm
+
+LABEL com.danswer.maintainer="founders@onyx.app"
+LABEL com.danswer.description="This image is the web/frontend container of Onyx which \
+contains code for both the Community and Enterprise editions of Onyx. If you do not \
+have a contract or agreement with DanswerAI, you are not permitted to use the Enterprise \
+Edition features outside of personal development or testing purposes. Please reach out to \
+founders@onyx.app for more information. Please visit https://github.com/onyx-dot-app/onyx"
+
+# Default ONYX_VERSION, typically overriden during builds by GitHub Actions.
+ARG ONYX_VERSION=0.0.0-dev
+# DO_NOT_TRACK is used to disable telemetry for Unstructured
+ENV ONYX_VERSION=${ONYX_VERSION} \
+    DANSWER_RUNNING_IN_DOCKER="true" \
+    DO_NOT_TRACK="true"
+
+
+RUN echo "ONYX_VERSION: ${ONYX_VERSION}"
+# Install system dependencies
+# cmake needed for psycopg (postgres)
+# libpq-dev needed for psycopg (postgres)
+# curl included just for users' convenience
+# zip for Vespa step futher down
+# ca-certificates for HTTPS
+RUN apt-get update && \
+    apt-get install -y \
+        cmake \
+        curl \
+        zip \
+        ca-certificates \
+        libgnutls30 \
+        libblkid1 \
+        libmount1 \
+        libsmartcols1 \
+        libuuid1 \
+        libxmlsec1-dev \
+        pkg-config \
+        gcc \
+        nano \
+        vim && \
+    rm -rf /var/lib/apt/lists/* && \
+    apt-get clean
+
+
+
+# Install Python dependencies
+# Remove py which is pulled in by retry, py is not needed and is a CVE
+COPY ./requirements/default.txt /tmp/requirements.txt
+COPY ./requirements/ee.txt /tmp/ee-requirements.txt
+RUN pip install --no-cache-dir --upgrade \
+        --retries 5 \
+        --timeout 30 \
+        -r /tmp/requirements.txt \
+        -r /tmp/ee-requirements.txt && \
+    pip uninstall -y py && \
+    playwright install chromium && \
+    playwright install-deps chromium && \
+    ln -s /usr/local/bin/supervisord /usr/bin/supervisord
+
+# Cleanup for CVEs and size reduction
+# https://github.com/tornadoweb/tornado/issues/3107
+# xserver-common and xvfb included by playwright installation but not needed after
+# perl-base is part of the base Python Debian image but not needed for Onyx functionality
+# perl-base could only be removed with --allow-remove-essential
+RUN apt-get update && \
+    apt-get remove -y --allow-remove-essential \
+        perl-base \
+        xserver-common \
+        xvfb \
+        cmake \
+        libldap-2.5-0 \
+        libxmlsec1-dev \
+        pkg-config \
+        gcc && \
+    apt-get install -y libxmlsec1-openssl && \
+    apt-get autoremove -y && \
+    rm -rf /var/lib/apt/lists/* && \
+    rm -f /usr/local/lib/python3.11/site-packages/tornado/test/test.key
+
+
+# Pre-downloading models for setups with limited egress
+RUN python -c "from tokenizers import Tokenizer; \
+Tokenizer.from_pretrained('nomic-ai/nomic-embed-text-v1')"
+
+# Pre-downloading NLTK for setups with limited egress
+RUN python -c "import nltk; \
+nltk.download('stopwords', quiet=True); \
+nltk.download('punkt', quiet=True);"
+# nltk.download('wordnet', quiet=True); introduce this back if lemmatization is needed
+
+# Set up application files
+WORKDIR /app
+
+# Enterprise Version Files
+COPY ./ee /app/ee
+COPY supervisord.conf /etc/supervisor/conf.d/supervisord.conf
+
+# Set up application files
+COPY ./onyx /app/onyx
+COPY ./shared_configs /app/shared_configs
+COPY ./alembic /app/alembic
+COPY ./alembic_tenants /app/alembic_tenants
+COPY ./alembic.ini /app/alembic.ini
+COPY supervisord.conf /usr/etc/supervisord.conf
+COPY ./static /app/static
+
+# Escape hatch scripts
+COPY ./scripts/debugging /app/scripts/debugging
+COPY ./scripts/force_delete_connector_by_id.py /app/scripts/force_delete_connector_by_id.py
+
+# Put logo in assets
+COPY ./assets /app/assets
+
+ENV PYTHONPATH=/app
+
+# Default command which does nothing
+# This container is used by api server and background which specify their own CMD
+CMD ["tail", "-f", "/dev/null"]

backend/Dockerfile.model_server

@@ -0,0 +1,61 @@
+FROM python:3.11.7-slim-bookworm
+
+LABEL com.danswer.maintainer="founders@onyx.app"
+LABEL com.danswer.description="This image is for the Onyx model server which runs all of the \
+AI models for Onyx. This container and all the code is MIT Licensed and free for all to use. \
+You can find it at https://hub.docker.com/r/onyx/onyx-model-server. For more details, \
+visit https://github.com/onyx-dot-app/onyx."
+
+# Default ONYX_VERSION, typically overriden during builds by GitHub Actions.
+ARG ONYX_VERSION=0.0.0-dev
+ENV ONYX_VERSION=${ONYX_VERSION} \
+    DANSWER_RUNNING_IN_DOCKER="true"
+
+
+RUN echo "ONYX_VERSION: ${ONYX_VERSION}"
+
+COPY ./requirements/model_server.txt /tmp/requirements.txt
+RUN pip install --no-cache-dir --upgrade \
+        --retries 5 \
+        --timeout 30 \
+        -r /tmp/requirements.txt
+
+RUN apt-get remove -y --allow-remove-essential perl-base && \ 
+    apt-get autoremove -y
+
+# Pre-downloading models for setups with limited egress
+# Download tokenizers, distilbert for the Onyx model
+# Download model weights
+# Run Nomic to pull in the custom architecture and have it cached locally
+RUN python -c "from transformers import AutoTokenizer; \
+AutoTokenizer.from_pretrained('distilbert-base-uncased'); \
+AutoTokenizer.from_pretrained('mixedbread-ai/mxbai-rerank-xsmall-v1'); \
+from huggingface_hub import snapshot_download; \
+snapshot_download(repo_id='onyx-dot-app/hybrid-intent-token-classifier'); \
+snapshot_download(repo_id='onyx-dot-app/information-content-model'); \
+snapshot_download('nomic-ai/nomic-embed-text-v1'); \
+snapshot_download('mixedbread-ai/mxbai-rerank-xsmall-v1'); \
+from sentence_transformers import SentenceTransformer; \
+SentenceTransformer(model_name_or_path='nomic-ai/nomic-embed-text-v1', trust_remote_code=True);"
+
+# In case the user has volumes mounted to /root/.cache/huggingface that they've downloaded while
+# running Onyx, don't overwrite it with the built in cache folder
+RUN mv /root/.cache/huggingface /root/.cache/temp_huggingface
+
+WORKDIR /app
+
+# Utils used by model server
+COPY ./onyx/utils/logger.py /app/onyx/utils/logger.py
+
+# Place to fetch version information
+COPY ./onyx/__init__.py /app/onyx/__init__.py
+
+# Shared between Onyx Backend and Model Server
+COPY ./shared_configs /app/shared_configs
+
+# Model Server main code
+COPY ./model_server /app/model_server
+
+ENV PYTHONPATH=/app
+
+CMD ["uvicorn", "model_server.main:app", "--host", "0.0.0.0", "--port", "9000"]

backend/alembic.ini

@@ -0,0 +1,118 @@
+# A generic, single database configuration.
+
+[DEFAULT]
+# path to migration scripts
+script_location = alembic
+
+# template used to generate migration file names; The default value is %%(rev)s_%%(slug)s
+# Uncomment the line below if you want the files to be prepended with date and time
+# file_template = %%(year)d_%%(month).2d_%%(day).2d_%%(hour).2d%%(minute).2d-%%(rev)s_%%(slug)s
+
+# sys.path path, will be prepended to sys.path if present.
+# defaults to the current working directory.
+prepend_sys_path = .
+
+# timezone to use when rendering the date within the migration file
+# as well as the filename.
+# If specified, requires the python-dateutil library that can be
+# installed by adding `alembic[tz]` to the pip requirements
+# string value is passed to dateutil.tz.gettz()
+# leave blank for localtime
+# timezone =
+
+# max length of characters to apply to the
+# "slug" field
+# truncate_slug_length = 40
+
+# set to 'true' to run the environment during
+# the 'revision' command, regardless of autogenerate
+# revision_environment = false
+
+# set to 'true' to allow .pyc and .pyo files without
+# a source .py file to be detected as revisions in the
+# versions/ directory
+# sourceless = false
+
+# version location specification; This defaults
+# to alembic/versions.  When using multiple version
+# directories, initial revisions must be specified with --version-path.
+# The path separator used here should be the separator specified by "version_path_separator" below.
+# version_locations = %(here)s/bar:%(here)s/bat:alembic/versions
+
+# version path separator; As mentioned above, this is the character used to split
+# version_locations. The default within new alembic.ini files is "os", which uses os.pathsep.
+# If this key is omitted entirely, it falls back to the legacy behavior of splitting on spaces and/or commas.
+# Valid values for version_path_separator are:
+#
+# version_path_separator = :
+# version_path_separator = ;
+# version_path_separator = space
+version_path_separator = os  
+# Use os.pathsep. Default configuration used for new projects.
+
+# set to 'true' to search source files recursively
+# in each "version_locations" directory
+# new in Alembic version 1.10
+# recursive_version_locations = false
+
+# the output encoding used when revision files
+# are written from script.py.mako
+# output_encoding = utf-8
+
+# sqlalchemy.url = driver://user:pass@localhost/dbname
+
+
+[post_write_hooks]
+# post_write_hooks defines scripts or Python functions that are run
+# on newly generated revision scripts.  See the documentation for further
+# detail and examples
+
+# format using "black" - use the console_scripts runner, against the "black" entrypoint
+hooks = black
+black.type = console_scripts
+black.entrypoint = black
+black.options = -l 79 REVISION_SCRIPT_FILENAME
+
+# Logging configuration
+[loggers]
+keys = root,sqlalchemy,alembic
+
+[handlers]
+keys = console
+
+[formatters]
+keys = generic
+
+[logger_root]
+level = INFO
+handlers = console
+qualname =
+
+[logger_sqlalchemy]
+level = WARN
+handlers =
+qualname = sqlalchemy.engine
+
+[logger_alembic]
+level = INFO
+handlers =
+qualname = alembic
+
+[handler_console]
+class = StreamHandler
+args = (sys.stderr,)
+level = NOTSET
+formatter = generic
+
+[formatter_generic]
+format = %(levelname)-5.5s [%(name)s] %(message)s
+datefmt = %H:%M:%S
+
+
+[alembic]
+script_location = alembic
+version_locations = %(script_location)s/versions
+
+[schema_private]
+script_location = alembic_tenants
+version_locations = %(script_location)s/versions

backend/alembic/README.md

@@ -0,0 +1,22 @@
+<!-- DANSWER_METADATA={"link": "https://github.com/onyx-dot-app/onyx/blob/main/backend/alembic/README.md"} -->
+
+# Alembic DB Migrations
+
+These files are for creating/updating the tables in the Relational DB (Postgres).
+Onyx migrations use a generic single-database configuration with an async dbapi.
+
+## To generate new migrations:
+
+run from onyx/backend:
+`alembic revision --autogenerate -m <DESCRIPTION_OF_MIGRATION>`
+
+More info can be found here: https://alembic.sqlalchemy.org/en/latest/autogenerate.html
+
+## Running migrations
+
+To run all un-applied migrations:
+`alembic upgrade head`
+
+To undo migrations:
+`alembic downgrade -X`
+where X is the number of migrations you want to undo from the current state

backend/alembic/env.py

@@ -0,0 +1,266 @@
+from typing import Any, Literal
+from onyx.db.engine import get_iam_auth_token
+from onyx.configs.app_configs import USE_IAM_AUTH
+from onyx.configs.app_configs import POSTGRES_HOST
+from onyx.configs.app_configs import POSTGRES_PORT
+from onyx.configs.app_configs import POSTGRES_USER
+from onyx.configs.app_configs import AWS_REGION_NAME
+from onyx.db.engine import build_connection_string
+from onyx.db.engine import get_all_tenant_ids
+from sqlalchemy import event
+from sqlalchemy import pool
+from sqlalchemy import text
+from sqlalchemy.engine.base import Connection
+import os
+import ssl
+import asyncio
+import logging
+from logging.config import fileConfig
+
+from alembic import context
+from sqlalchemy.ext.asyncio import create_async_engine
+from sqlalchemy.sql.schema import SchemaItem
+from onyx.configs.constants import SSL_CERT_FILE
+from shared_configs.configs import MULTI_TENANT, POSTGRES_DEFAULT_SCHEMA
+from onyx.db.models import Base
+from celery.backends.database.session import ResultModelBase  # type: ignore
+
+# Make sure in alembic.ini [logger_root] level=INFO is set or most logging will be
+# hidden! (defaults to level=WARN)
+
+# Alembic Config object
+config = context.config
+
+if config.config_file_name is not None and config.attributes.get(
+    "configure_logger", True
+):
+    fileConfig(config.config_file_name)
+
+target_metadata = [Base.metadata, ResultModelBase.metadata]
+
+EXCLUDE_TABLES = {"kombu_queue", "kombu_message"}
+
+logger = logging.getLogger(__name__)
+
+ssl_context: ssl.SSLContext | None = None
+if USE_IAM_AUTH:
+    if not os.path.exists(SSL_CERT_FILE):
+        raise FileNotFoundError(f"Expected {SSL_CERT_FILE} when USE_IAM_AUTH is true.")
+    ssl_context = ssl.create_default_context(cafile=SSL_CERT_FILE)
+
+
+def include_object(
+    object: SchemaItem,
+    name: str | None,
+    type_: Literal[
+        "schema",
+        "table",
+        "column",
+        "index",
+        "unique_constraint",
+        "foreign_key_constraint",
+    ],
+    reflected: bool,
+    compare_to: SchemaItem | None,
+) -> bool:
+    if type_ == "table" and name in EXCLUDE_TABLES:
+        return False
+    return True
+
+
+def get_schema_options() -> tuple[str, bool, bool, bool]:
+    x_args_raw = context.get_x_argument()
+    x_args = {}
+    for arg in x_args_raw:
+        for pair in arg.split(","):
+            if "=" in pair:
+                key, value = pair.split("=", 1)
+                x_args[key.strip()] = value.strip()
+    schema_name = x_args.get("schema", POSTGRES_DEFAULT_SCHEMA)
+    create_schema = x_args.get("create_schema", "true").lower() == "true"
+    upgrade_all_tenants = x_args.get("upgrade_all_tenants", "false").lower() == "true"
+
+    # continue on error with individual tenant
+    # only applies to online migrations
+    continue_on_error = x_args.get("continue", "false").lower() == "true"
+
+    if (
+        MULTI_TENANT
+        and schema_name == POSTGRES_DEFAULT_SCHEMA
+        and not upgrade_all_tenants
+    ):
+        raise ValueError(
+            "Cannot run default migrations in public schema when multi-tenancy is enabled. "
+            "Please specify a tenant-specific schema."
+        )
+
+    return schema_name, create_schema, upgrade_all_tenants, continue_on_error
+
+
+def do_run_migrations(
+    connection: Connection, schema_name: str, create_schema: bool
+) -> None:
+    if create_schema:
+        connection.execute(text(f'CREATE SCHEMA IF NOT EXISTS "{schema_name}"'))
+        connection.execute(text("COMMIT"))
+
+    connection.execute(text(f'SET search_path TO "{schema_name}"'))
+
+    context.configure(
+        connection=connection,
+        target_metadata=target_metadata,  # type: ignore
+        include_object=include_object,
+        version_table_schema=schema_name,
+        include_schemas=True,
+        compare_type=True,
+        compare_server_default=True,
+        script_location=config.get_main_option("script_location"),
+    )
+
+    with context.begin_transaction():
+        context.run_migrations()
+
+
+def provide_iam_token_for_alembic(
+    dialect: Any, conn_rec: Any, cargs: Any, cparams: Any
+) -> None:
+    if USE_IAM_AUTH:
+        # Database connection settings
+        region = AWS_REGION_NAME
+        host = POSTGRES_HOST
+        port = POSTGRES_PORT
+        user = POSTGRES_USER
+
+        # Get IAM authentication token
+        token = get_iam_auth_token(host, port, user, region)
+
+        # For Alembic / SQLAlchemy in this context, set SSL and password
+        cparams["password"] = token
+        cparams["ssl"] = ssl_context
+
+
+async def run_async_migrations() -> None:
+    (
+        schema_name,
+        create_schema,
+        upgrade_all_tenants,
+        continue_on_error,
+    ) = get_schema_options()
+
+    engine = create_async_engine(
+        build_connection_string(),
+        poolclass=pool.NullPool,
+    )
+
+    if USE_IAM_AUTH:
+
+        @event.listens_for(engine.sync_engine, "do_connect")
+        def event_provide_iam_token_for_alembic(
+            dialect: Any, conn_rec: Any, cargs: Any, cparams: Any
+        ) -> None:
+            provide_iam_token_for_alembic(dialect, conn_rec, cargs, cparams)
+
+    if upgrade_all_tenants:
+        tenant_schemas = get_all_tenant_ids()
+
+        i_tenant = 0
+        num_tenants = len(tenant_schemas)
+        for schema in tenant_schemas:
+            i_tenant += 1
+            logger.info(
+                f"Migrating schema: index={i_tenant} num_tenants={num_tenants} schema={schema}"
+            )
+            try:
+                async with engine.connect() as connection:
+                    await connection.run_sync(
+                        do_run_migrations,
+                        schema_name=schema,
+                        create_schema=create_schema,
+                    )
+            except Exception as e:
+                logger.error(f"Error migrating schema {schema}: {e}")
+                if not continue_on_error:
+                    logger.error("--continue is not set, raising exception!")
+                    raise
+
+                logger.warning("--continue is set, continuing to next schema.")
+
+    else:
+        try:
+            logger.info(f"Migrating schema: {schema_name}")
+            async with engine.connect() as connection:
+                await connection.run_sync(
+                    do_run_migrations,
+                    schema_name=schema_name,
+                    create_schema=create_schema,
+                )
+        except Exception as e:
+            logger.error(f"Error migrating schema {schema_name}: {e}")
+            raise
+
+    await engine.dispose()
+
+
+def run_migrations_offline() -> None:
+    """This doesn't really get used when we migrate in the cloud."""
+
+    logger.info("run_migrations_offline starting.")
+
+    schema_name, _, upgrade_all_tenants, continue_on_error = get_schema_options()
+    url = build_connection_string()
+
+    if upgrade_all_tenants:
+        engine = create_async_engine(url)
+
+        if USE_IAM_AUTH:
+
+            @event.listens_for(engine.sync_engine, "do_connect")
+            def event_provide_iam_token_for_alembic_offline(
+                dialect: Any, conn_rec: Any, cargs: Any, cparams: Any
+            ) -> None:
+                provide_iam_token_for_alembic(dialect, conn_rec, cargs, cparams)
+
+        tenant_schemas = get_all_tenant_ids()
+        engine.sync_engine.dispose()
+
+        for schema in tenant_schemas:
+            logger.info(f"Migrating schema: {schema}")
+            context.configure(
+                url=url,
+                target_metadata=target_metadata,  # type: ignore
+                literal_binds=True,
+                include_object=include_object,
+                version_table_schema=schema,
+                include_schemas=True,
+                script_location=config.get_main_option("script_location"),
+                dialect_opts={"paramstyle": "named"},
+            )
+
+            with context.begin_transaction():
+                context.run_migrations()
+    else:
+        logger.info(f"Migrating schema: {schema_name}")
+        context.configure(
+            url=url,
+            target_metadata=target_metadata,  # type: ignore
+            literal_binds=True,
+            include_object=include_object,
+            version_table_schema=schema_name,
+            include_schemas=True,
+            script_location=config.get_main_option("script_location"),
+            dialect_opts={"paramstyle": "named"},
+        )
+
+        with context.begin_transaction():
+            context.run_migrations()
+
+
+def run_migrations_online() -> None:
+    logger.info("run_migrations_online starting.")
+    asyncio.run(run_async_migrations())
+
+
+if context.is_offline_mode():
+    run_migrations_offline()
+else:
+    run_migrations_online()

backend/alembic/script.py.mako

@@ -0,0 +1,24 @@
+"""${message}
+
+Revision ID: ${up_revision}
+Revises: ${down_revision | comma,n}
+Create Date: ${create_date}
+
+"""
+from alembic import op
+import sqlalchemy as sa
+${imports if imports else ""}
+
+# revision identifiers, used by Alembic.
+revision = ${repr(up_revision)}
+down_revision = ${repr(down_revision)}
+branch_labels = ${repr(branch_labels)}
+depends_on = ${repr(depends_on)}
+
+
+def upgrade() -> None:
+    ${upgrades if upgrades else "pass"}
+
+
+def downgrade() -> None:
+    ${downgrades if downgrades else "pass"}

backend/alembic/versions/027381bce97c_add_shortcut_option_for_users.py

@@ -0,0 +1,29 @@
+"""add shortcut option for users
+
+Revision ID: 027381bce97c
+Revises: 6fc7886d665d
+Create Date: 2025-01-14 12:14:00.814390
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+
+# revision identifiers, used by Alembic.
+revision = "027381bce97c"
+down_revision = "6fc7886d665d"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "user",
+        sa.Column(
+            "shortcut_enabled", sa.Boolean(), nullable=False, server_default="false"
+        ),
+    )
+
+
+def downgrade() -> None:
+    op.drop_column("user", "shortcut_enabled")

backend/alembic/versions/0568ccf46a6b_add_thread_specific_model_selection.py

@@ -0,0 +1,27 @@
+"""Add thread specific model selection
+
+Revision ID: 0568ccf46a6b
+Revises: e209dc5a8156
+Create Date: 2024-06-19 14:25:36.376046
+
+"""
+
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "0568ccf46a6b"
+down_revision = "e209dc5a8156"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "chat_session",
+        sa.Column("current_alternate_model", sa.String(), nullable=True),
+    )
+
+
+def downgrade() -> None:
+    op.drop_column("chat_session", "current_alternate_model")

backend/alembic/versions/05c07bf07c00_add_search_doc_relevance_details.py

@@ -0,0 +1,32 @@
+"""add search doc relevance details
+
+Revision ID: 05c07bf07c00
+Revises: b896bbd0d5a7
+Create Date: 2024-07-10 17:48:15.886653
+
+"""
+
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "05c07bf07c00"
+down_revision = "b896bbd0d5a7"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "search_doc",
+        sa.Column("is_relevant", sa.Boolean(), nullable=True),
+    )
+    op.add_column(
+        "search_doc",
+        sa.Column("relevance_explanation", sa.String(), nullable=True),
+    )
+
+
+def downgrade() -> None:
+    op.drop_column("search_doc", "relevance_explanation")
+    op.drop_column("search_doc", "is_relevant")

backend/alembic/versions/08a1eda20fe1_add_earliest_indexing_to_connector.py

@@ -0,0 +1,26 @@
+"""add_indexing_start_to_connector
+
+Revision ID: 08a1eda20fe1
+Revises: 8a87bd6ec550
+Create Date: 2024-07-23 11:12:39.462397
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+
+# revision identifiers, used by Alembic.
+revision = "08a1eda20fe1"
+down_revision = "8a87bd6ec550"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "connector", sa.Column("indexing_start", sa.DateTime(), nullable=True)
+    )
+
+
+def downgrade() -> None:
+    op.drop_column("connector", "indexing_start")

backend/alembic/versions/0a2b51deb0b8_add_starter_prompts.py

@@ -0,0 +1,31 @@
+"""Add starter prompts
+
+Revision ID: 0a2b51deb0b8
+Revises: 5f4b8568a221
+Create Date: 2024-03-02 23:23:49.960309
+
+"""
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = "0a2b51deb0b8"
+down_revision = "5f4b8568a221"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "persona",
+        sa.Column(
+            "starter_messages",
+            postgresql.JSONB(astext_type=sa.Text()),
+            nullable=True,
+        ),
+    )
+
+
+def downgrade() -> None:
+    op.drop_column("persona", "starter_messages")

backend/alembic/versions/0a98909f2757_enable_encrypted_fields.py

@@ -0,0 +1,113 @@
+"""Enable Encrypted Fields
+
+Revision ID: 0a98909f2757
+Revises: 570282d33c49
+Create Date: 2024-05-05 19:30:34.317972
+
+"""
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.sql import table
+from sqlalchemy.dialects import postgresql
+import json
+
+from onyx.utils.encryption import encrypt_string_to_bytes
+
+# revision identifiers, used by Alembic.
+revision = "0a98909f2757"
+down_revision = "570282d33c49"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    connection = op.get_bind()
+
+    op.alter_column("key_value_store", "value", nullable=True)
+    op.add_column(
+        "key_value_store",
+        sa.Column(
+            "encrypted_value",
+            sa.LargeBinary,
+            nullable=True,
+        ),
+    )
+
+    # Need a temporary column to translate the JSONB to binary
+    op.add_column("credential", sa.Column("temp_column", sa.LargeBinary()))
+
+    creds_table = table(
+        "credential",
+        sa.Column("id", sa.Integer(), nullable=False),
+        sa.Column(
+            "credential_json",
+            postgresql.JSONB(astext_type=sa.Text()),
+            nullable=False,
+        ),
+        sa.Column(
+            "temp_column",
+            sa.LargeBinary(),
+            nullable=False,
+        ),
+    )
+
+    results = connection.execute(sa.select(creds_table))
+
+    # This uses the MIT encrypt which does not actually encrypt the credentials
+    # In other words, this upgrade does not apply the encryption. Porting existing sensitive data
+    # and key rotation currently is not supported and will come out in the future
+    for row_id, creds, _ in results:
+        creds_binary = encrypt_string_to_bytes(json.dumps(creds))
+        connection.execute(
+            creds_table.update()
+            .where(creds_table.c.id == row_id)
+            .values(temp_column=creds_binary)
+        )
+
+    op.drop_column("credential", "credential_json")
+    op.alter_column("credential", "temp_column", new_column_name="credential_json")
+
+    op.add_column("llm_provider", sa.Column("temp_column", sa.LargeBinary()))
+
+    llm_table = table(
+        "llm_provider",
+        sa.Column("id", sa.Integer(), nullable=False),
+        sa.Column(
+            "api_key",
+            sa.String(),
+            nullable=False,
+        ),
+        sa.Column(
+            "temp_column",
+            sa.LargeBinary(),
+            nullable=False,
+        ),
+    )
+    results = connection.execute(sa.select(llm_table))
+
+    for row_id, api_key, _ in results:
+        llm_key = encrypt_string_to_bytes(api_key)
+        connection.execute(
+            llm_table.update()
+            .where(llm_table.c.id == row_id)
+            .values(temp_column=llm_key)
+        )
+
+    op.drop_column("llm_provider", "api_key")
+    op.alter_column("llm_provider", "temp_column", new_column_name="api_key")
+
+
+def downgrade() -> None:
+    # Some information loss but this is ok. Should not allow decryption via downgrade.
+    op.drop_column("credential", "credential_json")
+    op.drop_column("llm_provider", "api_key")
+
+    op.add_column("llm_provider", sa.Column("api_key", sa.String()))
+    op.add_column(
+        "credential",
+        sa.Column("credential_json", postgresql.JSONB(astext_type=sa.Text())),
+    )
+
+    op.execute("DELETE FROM key_value_store WHERE value IS NULL")
+    op.alter_column("key_value_store", "value", nullable=False)
+    op.drop_column("key_value_store", "encrypted_value")

backend/alembic/versions/0ebb1d516877_add_ccpair_deletion_failure_message.py

@@ -0,0 +1,27 @@
+"""add ccpair deletion failure message
+
+Revision ID: 0ebb1d516877
+Revises: 52a219fb5233
+Create Date: 2024-09-10 15:03:48.233926
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+
+# revision identifiers, used by Alembic.
+revision = "0ebb1d516877"
+down_revision = "52a219fb5233"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "connector_credential_pair",
+        sa.Column("deletion_failure_message", sa.String(), nullable=True),
+    )
+
+
+def downgrade() -> None:
+    op.drop_column("connector_credential_pair", "deletion_failure_message")

backend/alembic/versions/0f7ff6d75b57_add_index_to_index_attempt_time_created.py

@@ -0,0 +1,36 @@
+"""add index to index_attempt.time_created
+
+Revision ID: 0f7ff6d75b57
+Revises: 369644546676
+Create Date: 2025-01-10 14:01:14.067144
+
+"""
+from alembic import op
+
+# revision identifiers, used by Alembic.
+revision = "0f7ff6d75b57"
+down_revision = "fec3db967bf7"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.create_index(
+        op.f("ix_index_attempt_status"),
+        "index_attempt",
+        ["status"],
+        unique=False,
+    )
+
+    op.create_index(
+        op.f("ix_index_attempt_time_created"),
+        "index_attempt",
+        ["time_created"],
+        unique=False,
+    )
+
+
+def downgrade() -> None:
+    op.drop_index(op.f("ix_index_attempt_time_created"), table_name="index_attempt")
+
+    op.drop_index(op.f("ix_index_attempt_status"), table_name="index_attempt")

backend/alembic/versions/15326fcec57e_introduce_onyx_apis.py

@@ -0,0 +1,37 @@
+"""Introduce Onyx APIs
+
+Revision ID: 15326fcec57e
+Revises: 77d07dffae64
+Create Date: 2023-11-11 20:51:24.228999
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+from onyx.configs.constants import DocumentSource
+
+# revision identifiers, used by Alembic.
+revision = "15326fcec57e"
+down_revision = "77d07dffae64"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.alter_column("credential", "is_admin", new_column_name="admin_public")
+    op.add_column(
+        "document",
+        sa.Column("from_ingestion_api", sa.Boolean(), nullable=True),
+    )
+    op.alter_column(
+        "connector",
+        "source",
+        type_=sa.String(length=50),
+        existing_type=sa.Enum(DocumentSource, native_enum=False),
+        existing_nullable=False,
+    )
+
+
+def downgrade() -> None:
+    op.drop_column("document", "from_ingestion_api")
+    op.alter_column("credential", "admin_public", new_column_name="is_admin")

backend/alembic/versions/173cae5bba26_port_config_store.py

@@ -0,0 +1,29 @@
+"""Port Config Store
+
+Revision ID: 173cae5bba26
+Revises: e50154680a5c
+Create Date: 2024-03-19 15:30:44.425436
+
+"""
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = "173cae5bba26"
+down_revision = "e50154680a5c"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.create_table(
+        "key_value_store",
+        sa.Column("key", sa.String(), nullable=False),
+        sa.Column("value", postgresql.JSONB(astext_type=sa.Text()), nullable=False),
+        sa.PrimaryKeyConstraint("key"),
+    )
+
+
+def downgrade() -> None:
+    op.drop_table("key_value_store")

backend/alembic/versions/177de57c21c9_display_custom_llm_models.py

@@ -0,0 +1,59 @@
+"""display custom llm models
+
+Revision ID: 177de57c21c9
+Revises: 4ee1287bd26a
+Create Date: 2024-11-21 11:49:04.488677
+
+"""
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+from sqlalchemy import and_
+
+revision = "177de57c21c9"
+down_revision = "4ee1287bd26a"
+branch_labels = None
+depends_on = None
+depends_on = None
+
+
+def upgrade() -> None:
+    conn = op.get_bind()
+    llm_provider = sa.table(
+        "llm_provider",
+        sa.column("id", sa.Integer),
+        sa.column("provider", sa.String),
+        sa.column("model_names", postgresql.ARRAY(sa.String)),
+        sa.column("display_model_names", postgresql.ARRAY(sa.String)),
+    )
+
+    excluded_providers = ["openai", "bedrock", "anthropic", "azure"]
+
+    providers_to_update = sa.select(
+        llm_provider.c.id,
+        llm_provider.c.model_names,
+        llm_provider.c.display_model_names,
+    ).where(
+        and_(
+            ~llm_provider.c.provider.in_(excluded_providers),
+            llm_provider.c.model_names.isnot(None),
+        )
+    )
+
+    results = conn.execute(providers_to_update).fetchall()
+
+    for provider_id, model_names, display_model_names in results:
+        if display_model_names is None:
+            display_model_names = []
+
+        combined_model_names = list(set(display_model_names + model_names))
+        update_stmt = (
+            llm_provider.update()
+            .where(llm_provider.c.id == provider_id)
+            .values(display_model_names=combined_model_names)
+        )
+        conn.execute(update_stmt)
+
+
+def downgrade() -> None:
+    pass

backend/alembic/versions/1a03d2c2856b_add_indexes_to_document__tag.py

@@ -0,0 +1,27 @@
+"""Add indexes to document__tag
+
+Revision ID: 1a03d2c2856b
+Revises: 9c00a2bccb83
+Create Date: 2025-02-18 10:45:13.957807
+
+"""
+from alembic import op
+
+# revision identifiers, used by Alembic.
+revision = "1a03d2c2856b"
+down_revision = "9c00a2bccb83"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.create_index(
+        op.f("ix_document__tag_tag_id"),
+        "document__tag",
+        ["tag_id"],
+        unique=False,
+    )
+
+
+def downgrade() -> None:
+    op.drop_index(op.f("ix_document__tag_tag_id"), table_name="document__tag")

backend/alembic/versions/1b10e1fda030_add_additional_data_to_notifications.py

@@ -0,0 +1,26 @@
+"""add additional data to notifications
+
+Revision ID: 1b10e1fda030
+Revises: 6756efa39ada
+Create Date: 2024-10-15 19:26:44.071259
+
+"""
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = "1b10e1fda030"
+down_revision = "6756efa39ada"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "notification", sa.Column("additional_data", postgresql.JSONB(), nullable=True)
+    )
+
+
+def downgrade() -> None:
+    op.drop_column("notification", "additional_data")

backend/alembic/versions/1b8206b29c5d_add_user_delete_cascades.py

@@ -0,0 +1,102 @@
+"""add_user_delete_cascades
+
+Revision ID: 1b8206b29c5d
+Revises: 35e6853a51d5
+Create Date: 2024-09-18 11:48:59.418726
+
+"""
+from alembic import op
+
+
+# revision identifiers, used by Alembic.
+revision = "1b8206b29c5d"
+down_revision = "35e6853a51d5"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    op.drop_constraint("credential_user_id_fkey", "credential", type_="foreignkey")
+    op.create_foreign_key(
+        "credential_user_id_fkey",
+        "credential",
+        "user",
+        ["user_id"],
+        ["id"],
+        ondelete="CASCADE",
+    )
+
+    op.drop_constraint("chat_session_user_id_fkey", "chat_session", type_="foreignkey")
+    op.create_foreign_key(
+        "chat_session_user_id_fkey",
+        "chat_session",
+        "user",
+        ["user_id"],
+        ["id"],
+        ondelete="CASCADE",
+    )
+
+    op.drop_constraint("chat_folder_user_id_fkey", "chat_folder", type_="foreignkey")
+    op.create_foreign_key(
+        "chat_folder_user_id_fkey",
+        "chat_folder",
+        "user",
+        ["user_id"],
+        ["id"],
+        ondelete="CASCADE",
+    )
+
+    op.drop_constraint("prompt_user_id_fkey", "prompt", type_="foreignkey")
+    op.create_foreign_key(
+        "prompt_user_id_fkey", "prompt", "user", ["user_id"], ["id"], ondelete="CASCADE"
+    )
+
+    op.drop_constraint("notification_user_id_fkey", "notification", type_="foreignkey")
+    op.create_foreign_key(
+        "notification_user_id_fkey",
+        "notification",
+        "user",
+        ["user_id"],
+        ["id"],
+        ondelete="CASCADE",
+    )
+
+    op.drop_constraint("inputprompt_user_id_fkey", "inputprompt", type_="foreignkey")
+    op.create_foreign_key(
+        "inputprompt_user_id_fkey",
+        "inputprompt",
+        "user",
+        ["user_id"],
+        ["id"],
+        ondelete="CASCADE",
+    )
+
+
+def downgrade() -> None:
+    op.drop_constraint("credential_user_id_fkey", "credential", type_="foreignkey")
+    op.create_foreign_key(
+        "credential_user_id_fkey", "credential", "user", ["user_id"], ["id"]
+    )
+
+    op.drop_constraint("chat_session_user_id_fkey", "chat_session", type_="foreignkey")
+    op.create_foreign_key(
+        "chat_session_user_id_fkey", "chat_session", "user", ["user_id"], ["id"]
+    )
+
+    op.drop_constraint("chat_folder_user_id_fkey", "chat_folder", type_="foreignkey")
+    op.create_foreign_key(
+        "chat_folder_user_id_fkey", "chat_folder", "user", ["user_id"], ["id"]
+    )
+
+    op.drop_constraint("prompt_user_id_fkey", "prompt", type_="foreignkey")
+    op.create_foreign_key("prompt_user_id_fkey", "prompt", "user", ["user_id"], ["id"])
+
+    op.drop_constraint("notification_user_id_fkey", "notification", type_="foreignkey")
+    op.create_foreign_key(
+        "notification_user_id_fkey", "notification", "user", ["user_id"], ["id"]
+    )
+
+    op.drop_constraint("inputprompt_user_id_fkey", "inputprompt", type_="foreignkey")
+    op.create_foreign_key(
+        "inputprompt_user_id_fkey", "inputprompt", "user", ["user_id"], ["id"]
+    )

backend/alembic/versions/1f60f60c3401_embedding_model_search_settings.py

@@ -0,0 +1,135 @@
+"""embedding model -> search settings
+
+Revision ID: 1f60f60c3401
+Revises: f17bf3b0d9f1
+Create Date: 2024-08-25 12:39:51.731632
+
+"""
+
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+
+from onyx.configs.chat_configs import NUM_POSTPROCESSED_RESULTS
+
+# revision identifiers, used by Alembic.
+revision = "1f60f60c3401"
+down_revision = "f17bf3b0d9f1"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.drop_constraint(
+        "index_attempt__embedding_model_fk", "index_attempt", type_="foreignkey"
+    )
+    # Rename the table
+    op.rename_table("embedding_model", "search_settings")
+
+    # Add new columns
+    op.add_column(
+        "search_settings",
+        sa.Column(
+            "multipass_indexing", sa.Boolean(), nullable=False, server_default="false"
+        ),
+    )
+    op.add_column(
+        "search_settings",
+        sa.Column(
+            "multilingual_expansion",
+            postgresql.ARRAY(sa.String()),
+            nullable=False,
+            server_default="{}",
+        ),
+    )
+    op.add_column(
+        "search_settings",
+        sa.Column(
+            "disable_rerank_for_streaming",
+            sa.Boolean(),
+            nullable=False,
+            server_default="false",
+        ),
+    )
+    op.add_column(
+        "search_settings", sa.Column("rerank_model_name", sa.String(), nullable=True)
+    )
+    op.add_column(
+        "search_settings", sa.Column("rerank_provider_type", sa.String(), nullable=True)
+    )
+    op.add_column(
+        "search_settings", sa.Column("rerank_api_key", sa.String(), nullable=True)
+    )
+    op.add_column(
+        "search_settings",
+        sa.Column(
+            "num_rerank",
+            sa.Integer(),
+            nullable=False,
+            server_default=str(NUM_POSTPROCESSED_RESULTS),
+        ),
+    )
+
+    # Add the new column as nullable initially
+    op.add_column(
+        "index_attempt", sa.Column("search_settings_id", sa.Integer(), nullable=True)
+    )
+
+    # Populate the new column with data from the existing embedding_model_id
+    op.execute("UPDATE index_attempt SET search_settings_id = embedding_model_id")
+
+    # Create the foreign key constraint
+    op.create_foreign_key(
+        "fk_index_attempt_search_settings",
+        "index_attempt",
+        "search_settings",
+        ["search_settings_id"],
+        ["id"],
+    )
+
+    # Make the new column non-nullable
+    op.alter_column("index_attempt", "search_settings_id", nullable=False)
+
+    # Drop the old embedding_model_id column
+    op.drop_column("index_attempt", "embedding_model_id")
+
+
+def downgrade() -> None:
+    # Add back the embedding_model_id column
+    op.add_column(
+        "index_attempt", sa.Column("embedding_model_id", sa.Integer(), nullable=True)
+    )
+
+    # Populate the old column with data from search_settings_id
+    op.execute("UPDATE index_attempt SET embedding_model_id = search_settings_id")
+
+    # Make the old column non-nullable
+    op.alter_column("index_attempt", "embedding_model_id", nullable=False)
+
+    # Drop the foreign key constraint
+    op.drop_constraint(
+        "fk_index_attempt_search_settings", "index_attempt", type_="foreignkey"
+    )
+
+    # Drop the new search_settings_id column
+    op.drop_column("index_attempt", "search_settings_id")
+
+    # Rename the table back
+    op.rename_table("search_settings", "embedding_model")
+
+    # Remove added columns
+    op.drop_column("embedding_model", "num_rerank")
+    op.drop_column("embedding_model", "rerank_api_key")
+    op.drop_column("embedding_model", "rerank_provider_type")
+    op.drop_column("embedding_model", "rerank_model_name")
+    op.drop_column("embedding_model", "disable_rerank_for_streaming")
+    op.drop_column("embedding_model", "multilingual_expansion")
+    op.drop_column("embedding_model", "multipass_indexing")
+
+    op.create_foreign_key(
+        "index_attempt__embedding_model_fk",
+        "index_attempt",
+        "embedding_model",
+        ["embedding_model_id"],
+        ["id"],
+    )

backend/alembic/versions/213fd978c6d8_notifications.py

@@ -0,0 +1,44 @@
+"""notifications
+
+Revision ID: 213fd978c6d8
+Revises: 5fc1f54cc252
+Create Date: 2024-08-10 11:13:36.070790
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "213fd978c6d8"
+down_revision = "5fc1f54cc252"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.create_table(
+        "notification",
+        sa.Column("id", sa.Integer(), nullable=False),
+        sa.Column(
+            "notif_type",
+            sa.String(),
+            nullable=False,
+        ),
+        sa.Column(
+            "user_id",
+            sa.UUID(),
+            nullable=True,
+        ),
+        sa.Column("dismissed", sa.Boolean(), nullable=False),
+        sa.Column("last_shown", sa.DateTime(timezone=True), nullable=False),
+        sa.Column("first_shown", sa.DateTime(timezone=True), nullable=False),
+        sa.ForeignKeyConstraint(
+            ["user_id"],
+            ["user.id"],
+        ),
+        sa.PrimaryKeyConstraint("id"),
+    )
+
+
+def downgrade() -> None:
+    op.drop_table("notification")

backend/alembic/versions/23957775e5f5_remove_feedback_foreignkey_constraint.py

@@ -0,0 +1,86 @@
+"""remove-feedback-foreignkey-constraint
+
+Revision ID: 23957775e5f5
+Revises: bc9771dccadf
+Create Date: 2024-06-27 16:04:51.480437
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "23957775e5f5"
+down_revision = "bc9771dccadf"
+branch_labels = None  # type: ignore
+depends_on = None  # type: ignore
+
+
+def upgrade() -> None:
+    op.drop_constraint(
+        "chat_feedback__chat_message_fk", "chat_feedback", type_="foreignkey"
+    )
+    op.create_foreign_key(
+        "chat_feedback__chat_message_fk",
+        "chat_feedback",
+        "chat_message",
+        ["chat_message_id"],
+        ["id"],
+        ondelete="SET NULL",
+    )
+    op.alter_column(
+        "chat_feedback", "chat_message_id", existing_type=sa.Integer(), nullable=True
+    )
+    op.drop_constraint(
+        "document_retrieval_feedback__chat_message_fk",
+        "document_retrieval_feedback",
+        type_="foreignkey",
+    )
+    op.create_foreign_key(
+        "document_retrieval_feedback__chat_message_fk",
+        "document_retrieval_feedback",
+        "chat_message",
+        ["chat_message_id"],
+        ["id"],
+        ondelete="SET NULL",
+    )
+    op.alter_column(
+        "document_retrieval_feedback",
+        "chat_message_id",
+        existing_type=sa.Integer(),
+        nullable=True,
+    )
+
+
+def downgrade() -> None:
+    op.alter_column(
+        "chat_feedback", "chat_message_id", existing_type=sa.Integer(), nullable=False
+    )
+    op.drop_constraint(
+        "chat_feedback__chat_message_fk", "chat_feedback", type_="foreignkey"
+    )
+    op.create_foreign_key(
+        "chat_feedback__chat_message_fk",
+        "chat_feedback",
+        "chat_message",
+        ["chat_message_id"],
+        ["id"],
+    )
+
+    op.alter_column(
+        "document_retrieval_feedback",
+        "chat_message_id",
+        existing_type=sa.Integer(),
+        nullable=False,
+    )
+    op.drop_constraint(
+        "document_retrieval_feedback__chat_message_fk",
+        "document_retrieval_feedback",
+        type_="foreignkey",
+    )
+    op.create_foreign_key(
+        "document_retrieval_feedback__chat_message_fk",
+        "document_retrieval_feedback",
+        "chat_message",
+        ["chat_message_id"],
+        ["id"],
+    )

backend/alembic/versions/2666d766cb9b_google_oauth2.py

@@ -0,0 +1,55 @@
+"""Google OAuth2
+
+Revision ID: 2666d766cb9b
+Revises: 6d387b3196c2
+Create Date: 2023-05-05 15:49:35.716016
+
+"""
+import fastapi_users_db_sqlalchemy
+import sqlalchemy as sa
+from alembic import op
+
+
+# revision identifiers, used by Alembic.
+revision = "2666d766cb9b"
+down_revision = "6d387b3196c2"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.create_table(
+        "oauth_account",
+        sa.Column("id", fastapi_users_db_sqlalchemy.generics.GUID(), nullable=False),
+        sa.Column(
+            "user_id",
+            fastapi_users_db_sqlalchemy.generics.GUID(),
+            nullable=False,
+        ),
+        sa.Column("oauth_name", sa.String(length=100), nullable=False),
+        sa.Column("access_token", sa.String(length=1024), nullable=False),
+        sa.Column("expires_at", sa.Integer(), nullable=True),
+        sa.Column("refresh_token", sa.String(length=1024), nullable=True),
+        sa.Column("account_id", sa.String(length=320), nullable=False),
+        sa.Column("account_email", sa.String(length=320), nullable=False),
+        sa.ForeignKeyConstraint(["user_id"], ["user.id"], ondelete="cascade"),
+        sa.PrimaryKeyConstraint("id"),
+    )
+    op.create_index(
+        op.f("ix_oauth_account_account_id"),
+        "oauth_account",
+        ["account_id"],
+        unique=False,
+    )
+    op.create_index(
+        op.f("ix_oauth_account_oauth_name"),
+        "oauth_account",
+        ["oauth_name"],
+        unique=False,
+    )
+
+
+def downgrade() -> None:
+    op.drop_index(op.f("ix_oauth_account_oauth_name"), table_name="oauth_account")
+    op.drop_index(op.f("ix_oauth_account_account_id"), table_name="oauth_account")
+    op.drop_table("oauth_account")

backend/alembic/versions/26b931506ecb_default_chosen_assistants_to_none.py

@@ -0,0 +1,68 @@
+"""default chosen assistants to none
+
+Revision ID: 26b931506ecb
+Revises: 2daa494a0851
+Create Date: 2024-11-12 13:23:29.858995
+
+"""
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = "26b931506ecb"
+down_revision = "2daa494a0851"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "user", sa.Column("chosen_assistants_new", postgresql.JSONB(), nullable=True)
+    )
+
+    op.execute(
+        """
+    UPDATE "user"
+    SET chosen_assistants_new =
+        CASE
+            WHEN chosen_assistants = '[-2, -1, 0]' THEN NULL
+            ELSE chosen_assistants
+        END
+    """
+    )
+
+    op.drop_column("user", "chosen_assistants")
+
+    op.alter_column(
+        "user", "chosen_assistants_new", new_column_name="chosen_assistants"
+    )
+
+
+def downgrade() -> None:
+    op.add_column(
+        "user",
+        sa.Column(
+            "chosen_assistants_old",
+            postgresql.JSONB(),
+            nullable=False,
+            server_default="[-2, -1, 0]",
+        ),
+    )
+
+    op.execute(
+        """
+    UPDATE "user"
+    SET chosen_assistants_old =
+        CASE
+            WHEN chosen_assistants IS NULL THEN '[-2, -1, 0]'::jsonb
+            ELSE chosen_assistants
+        END
+    """
+    )
+
+    op.drop_column("user", "chosen_assistants")
+
+    op.alter_column(
+        "user", "chosen_assistants_old", new_column_name="chosen_assistants"
+    )

backend/alembic/versions/27c6ecc08586_permission_framework.py

@@ -0,0 +1,189 @@
+"""Permission Framework
+
+Revision ID: 27c6ecc08586
+Revises: 2666d766cb9b
+Create Date: 2023-05-24 18:45:17.244495
+
+"""
+import fastapi_users_db_sqlalchemy
+import sqlalchemy as sa
+from alembic import op
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = "27c6ecc08586"
+down_revision = "2666d766cb9b"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.execute("TRUNCATE TABLE index_attempt")
+    op.create_table(
+        "connector",
+        sa.Column("id", sa.Integer(), nullable=False),
+        sa.Column("name", sa.String(), nullable=False),
+        sa.Column(
+            "source",
+            sa.Enum(
+                "SLACK",
+                "WEB",
+                "GOOGLE_DRIVE",
+                "GITHUB",
+                "CONFLUENCE",
+                name="documentsource",
+                native_enum=False,
+            ),
+            nullable=False,
+        ),
+        sa.Column(
+            "input_type",
+            sa.Enum(
+                "LOAD_STATE",
+                "POLL",
+                "EVENT",
+                name="inputtype",
+                native_enum=False,
+            ),
+            nullable=True,
+        ),
+        sa.Column(
+            "connector_specific_config",
+            postgresql.JSONB(astext_type=sa.Text()),
+            nullable=False,
+        ),
+        sa.Column("refresh_freq", sa.Integer(), nullable=True),
+        sa.Column(
+            "time_created",
+            sa.DateTime(timezone=True),
+            server_default=sa.text("now()"),
+            nullable=False,
+        ),
+        sa.Column(
+            "time_updated",
+            sa.DateTime(timezone=True),
+            server_default=sa.text("now()"),
+            nullable=False,
+        ),
+        sa.Column("disabled", sa.Boolean(), nullable=False),
+        sa.PrimaryKeyConstraint("id"),
+    )
+    op.create_table(
+        "credential",
+        sa.Column("id", sa.Integer(), nullable=False),
+        sa.Column(
+            "credential_json",
+            postgresql.JSONB(astext_type=sa.Text()),
+            nullable=False,
+        ),
+        sa.Column(
+            "user_id",
+            fastapi_users_db_sqlalchemy.generics.GUID(),
+            nullable=True,
+        ),
+        sa.Column("public_doc", sa.Boolean(), nullable=False),
+        sa.Column(
+            "time_created",
+            sa.DateTime(timezone=True),
+            server_default=sa.text("now()"),
+            nullable=False,
+        ),
+        sa.Column(
+            "time_updated",
+            sa.DateTime(timezone=True),
+            server_default=sa.text("now()"),
+            nullable=False,
+        ),
+        sa.ForeignKeyConstraint(
+            ["user_id"],
+            ["user.id"],
+        ),
+        sa.PrimaryKeyConstraint("id"),
+    )
+    op.create_table(
+        "connector_credential_pair",
+        sa.Column("connector_id", sa.Integer(), nullable=False),
+        sa.Column("credential_id", sa.Integer(), nullable=False),
+        sa.ForeignKeyConstraint(
+            ["connector_id"],
+            ["connector.id"],
+        ),
+        sa.ForeignKeyConstraint(
+            ["credential_id"],
+            ["credential.id"],
+        ),
+        sa.PrimaryKeyConstraint("connector_id", "credential_id"),
+    )
+    op.add_column(
+        "index_attempt",
+        sa.Column("connector_id", sa.Integer(), nullable=True),
+    )
+    op.add_column(
+        "index_attempt",
+        sa.Column("credential_id", sa.Integer(), nullable=True),
+    )
+    op.create_foreign_key(
+        "fk_index_attempt_credential_id",
+        "index_attempt",
+        "credential",
+        ["credential_id"],
+        ["id"],
+    )
+    op.create_foreign_key(
+        "fk_index_attempt_connector_id",
+        "index_attempt",
+        "connector",
+        ["connector_id"],
+        ["id"],
+    )
+    op.drop_column("index_attempt", "connector_specific_config")
+    op.drop_column("index_attempt", "source")
+    op.drop_column("index_attempt", "input_type")
+
+
+def downgrade() -> None:
+    op.execute("TRUNCATE TABLE index_attempt")
+    op.add_column(
+        "index_attempt",
+        sa.Column("input_type", sa.VARCHAR(), autoincrement=False, nullable=False),
+    )
+    op.add_column(
+        "index_attempt",
+        sa.Column("source", sa.VARCHAR(), autoincrement=False, nullable=False),
+    )
+    op.add_column(
+        "index_attempt",
+        sa.Column(
+            "connector_specific_config",
+            postgresql.JSONB(astext_type=sa.Text()),
+            autoincrement=False,
+            nullable=False,
+        ),
+    )
+
+    # Check if the constraint exists before dropping
+    conn = op.get_bind()
+    inspector = sa.inspect(conn)
+    constraints = inspector.get_foreign_keys("index_attempt")
+
+    if any(
+        constraint["name"] == "fk_index_attempt_credential_id"
+        for constraint in constraints
+    ):
+        op.drop_constraint(
+            "fk_index_attempt_credential_id", "index_attempt", type_="foreignkey"
+        )
+
+    if any(
+        constraint["name"] == "fk_index_attempt_connector_id"
+        for constraint in constraints
+    ):
+        op.drop_constraint(
+            "fk_index_attempt_connector_id", "index_attempt", type_="foreignkey"
+        )
+
+    op.drop_column("index_attempt", "credential_id")
+    op.drop_column("index_attempt", "connector_id")
+    op.drop_table("connector_credential_pair")
+    op.drop_table("credential")
+    op.drop_table("connector")

backend/alembic/versions/2955778aa44c_add_chunk_count_to_document.py

@@ -0,0 +1,24 @@
+"""add chunk count to document
+
+Revision ID: 2955778aa44c
+Revises: c0aab6edb6dd
+Create Date: 2025-01-04 11:39:43.268612
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+
+# revision identifiers, used by Alembic.
+revision = "2955778aa44c"
+down_revision = "c0aab6edb6dd"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    op.add_column("document", sa.Column("chunk_count", sa.Integer(), nullable=True))
+
+
+def downgrade() -> None:
+    op.drop_column("document", "chunk_count")

backend/alembic/versions/2cdeff6d8c93_set_built_in_to_default.py

@@ -0,0 +1,32 @@
+"""set built in to default
+
+Revision ID: 2cdeff6d8c93
+Revises: f5437cc136c5
+Create Date: 2025-02-11 14:57:51.308775
+
+"""
+from alembic import op
+
+
+# revision identifiers, used by Alembic.
+revision = "2cdeff6d8c93"
+down_revision = "f5437cc136c5"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    # Prior to this migration / point in the codebase history,
+    # built in personas were implicitly treated as default personas (with no option to change this)
+    # This migration makes that explicit
+    op.execute(
+        """
+        UPDATE persona
+        SET is_default_persona = TRUE
+        WHERE builtin_persona = TRUE
+    """
+    )
+
+
+def downgrade() -> None:
+    pass

backend/alembic/versions/2d2304e27d8c_add_above_below_to_persona.py

@@ -0,0 +1,32 @@
+"""Add Above Below to Persona
+
+Revision ID: 2d2304e27d8c
+Revises: 4b08d97e175a
+Create Date: 2024-08-21 19:15:15.762948
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "2d2304e27d8c"
+down_revision = "4b08d97e175a"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.add_column("persona", sa.Column("chunks_above", sa.Integer(), nullable=True))
+    op.add_column("persona", sa.Column("chunks_below", sa.Integer(), nullable=True))
+
+    op.execute(
+        "UPDATE persona SET chunks_above = 1, chunks_below = 1 WHERE chunks_above IS NULL AND chunks_below IS NULL"
+    )
+
+    op.alter_column("persona", "chunks_above", nullable=False)
+    op.alter_column("persona", "chunks_below", nullable=False)
+
+
+def downgrade() -> None:
+    op.drop_column("persona", "chunks_below")
+    op.drop_column("persona", "chunks_above")

backend/alembic/versions/2daa494a0851_add_group_sync_time.py

@@ -0,0 +1,30 @@
+"""add-group-sync-time
+
+Revision ID: 2daa494a0851
+Revises: c0fd6e4da83a
+Create Date: 2024-11-11 10:57:22.991157
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "2daa494a0851"
+down_revision = "c0fd6e4da83a"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "connector_credential_pair",
+        sa.Column(
+            "last_time_external_group_sync",
+            sa.DateTime(timezone=True),
+            nullable=True,
+        ),
+    )
+
+
+def downgrade() -> None:
+    op.drop_column("connector_credential_pair", "last_time_external_group_sync")

backend/alembic/versions/2f80c6a2550f_add_chat_session_specific_temperature_.py

@@ -0,0 +1,36 @@
+"""add chat session specific temperature override
+
+Revision ID: 2f80c6a2550f
+Revises: 33ea50e88f24
+Create Date: 2025-01-31 10:30:27.289646
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+
+# revision identifiers, used by Alembic.
+revision = "2f80c6a2550f"
+down_revision = "33ea50e88f24"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "chat_session", sa.Column("temperature_override", sa.Float(), nullable=True)
+    )
+    op.add_column(
+        "user",
+        sa.Column(
+            "temperature_override_enabled",
+            sa.Boolean(),
+            nullable=False,
+            server_default=sa.false(),
+        ),
+    )
+
+
+def downgrade() -> None:
+    op.drop_column("chat_session", "temperature_override")
+    op.drop_column("user", "temperature_override_enabled")

backend/alembic/versions/30c1d5744104_persona_datetime_aware.py

@@ -0,0 +1,37 @@
+"""Persona Datetime Aware
+
+Revision ID: 30c1d5744104
+Revises: 7f99be1cb9f5
+Create Date: 2023-10-16 23:21:01.283424
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "30c1d5744104"
+down_revision = "7f99be1cb9f5"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.add_column("persona", sa.Column("datetime_aware", sa.Boolean(), nullable=True))
+    op.execute("UPDATE persona SET datetime_aware = TRUE")
+    op.alter_column("persona", "datetime_aware", nullable=False)
+    op.create_index(
+        "_default_persona_name_idx",
+        "persona",
+        ["name"],
+        unique=True,
+        postgresql_where=sa.text("default_persona = true"),
+    )
+
+
+def downgrade() -> None:
+    op.drop_index(
+        "_default_persona_name_idx",
+        table_name="persona",
+        postgresql_where=sa.text("default_persona = true"),
+    )
+    op.drop_column("persona", "datetime_aware")

backend/alembic/versions/325975216eb3_add_icon_color_and_icon_shape_to_persona.py

@@ -0,0 +1,70 @@
+"""Add icon_color and icon_shape to Persona
+
+Revision ID: 325975216eb3
+Revises: 91ffac7e65b3
+Create Date: 2024-07-24 21:29:31.784562
+
+"""
+import random
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.sql import table, column, select
+
+# revision identifiers, used by Alembic.
+revision = "325975216eb3"
+down_revision = "91ffac7e65b3"
+branch_labels: None = None
+depends_on: None = None
+
+
+colorOptions = [
+    "#FF6FBF",
+    "#6FB1FF",
+    "#B76FFF",
+    "#FFB56F",
+    "#6FFF8D",
+    "#FF6F6F",
+    "#6FFFFF",
+]
+
+
+# Function to generate a random shape ensuring at least 3 of the middle 4 squares are filled
+def generate_random_shape() -> int:
+    center_squares = [12, 10, 6, 14, 13, 11, 7, 15]
+    center_fill = random.choice(center_squares)
+    remaining_squares = [i for i in range(16) if not (center_fill & (1 << i))]
+    random.shuffle(remaining_squares)
+    for i in range(10 - bin(center_fill).count("1")):
+        center_fill |= 1 << remaining_squares[i]
+    return center_fill
+
+
+def upgrade() -> None:
+    op.add_column("persona", sa.Column("icon_color", sa.String(), nullable=True))
+    op.add_column("persona", sa.Column("icon_shape", sa.Integer(), nullable=True))
+    op.add_column("persona", sa.Column("uploaded_image_id", sa.String(), nullable=True))
+
+    persona = table(
+        "persona",
+        column("id", sa.Integer),
+        column("icon_color", sa.String),
+        column("icon_shape", sa.Integer),
+    )
+
+    conn = op.get_bind()
+    personas = conn.execute(select(persona.c.id))
+
+    for persona_id in personas:
+        random_color = random.choice(colorOptions)
+        random_shape = generate_random_shape()
+        conn.execute(
+            persona.update()
+            .where(persona.c.id == persona_id[0])
+            .values(icon_color=random_color, icon_shape=random_shape)
+        )
+
+
+def downgrade() -> None:
+    op.drop_column("persona", "icon_shape")
+    op.drop_column("persona", "uploaded_image_id")
+    op.drop_column("persona", "icon_color")

backend/alembic/versions/33cb72ea4d80_single_tool_call_per_message.py

@@ -0,0 +1,50 @@
+"""single tool call per message
+
+Revision ID: 33cb72ea4d80
+Revises: 5b29123cd710
+Create Date: 2024-11-01 12:51:01.535003
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+
+# revision identifiers, used by Alembic.
+revision = "33cb72ea4d80"
+down_revision = "5b29123cd710"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    # Step 1: Delete extraneous ToolCall entries
+    # Keep only the ToolCall with the smallest 'id' for each 'message_id'
+    op.execute(
+        sa.text(
+            """
+            DELETE FROM tool_call
+            WHERE id NOT IN (
+                SELECT MIN(id)
+                FROM tool_call
+                WHERE message_id IS NOT NULL
+                GROUP BY message_id
+            );
+        """
+        )
+    )
+
+    # Step 2: Add a unique constraint on message_id
+    op.create_unique_constraint(
+        constraint_name="uq_tool_call_message_id",
+        table_name="tool_call",
+        columns=["message_id"],
+    )
+
+
+def downgrade() -> None:
+    # Step 1: Drop the unique constraint on message_id
+    op.drop_constraint(
+        constraint_name="uq_tool_call_message_id",
+        table_name="tool_call",
+        type_="unique",
+    )

backend/alembic/versions/33ea50e88f24_foreign_key_input_prompts.py

@@ -0,0 +1,80 @@
+"""foreign key input prompts
+
+Revision ID: 33ea50e88f24
+Revises: a6df6b88ef81
+Create Date: 2025-01-29 10:54:22.141765
+
+"""
+from alembic import op
+
+
+# revision identifiers, used by Alembic.
+revision = "33ea50e88f24"
+down_revision = "a6df6b88ef81"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    # Safely drop constraints if exists
+    op.execute(
+        """
+        ALTER TABLE inputprompt__user
+        DROP CONSTRAINT IF EXISTS inputprompt__user_input_prompt_id_fkey
+        """
+    )
+    op.execute(
+        """
+        ALTER TABLE inputprompt__user
+        DROP CONSTRAINT IF EXISTS inputprompt__user_user_id_fkey
+        """
+    )
+
+    # Recreate with ON DELETE CASCADE
+    op.create_foreign_key(
+        "inputprompt__user_input_prompt_id_fkey",
+        "inputprompt__user",
+        "inputprompt",
+        ["input_prompt_id"],
+        ["id"],
+        ondelete="CASCADE",
+    )
+
+    op.create_foreign_key(
+        "inputprompt__user_user_id_fkey",
+        "inputprompt__user",
+        "user",
+        ["user_id"],
+        ["id"],
+        ondelete="CASCADE",
+    )
+
+
+def downgrade() -> None:
+    # Drop the new FKs with ondelete
+    op.drop_constraint(
+        "inputprompt__user_input_prompt_id_fkey",
+        "inputprompt__user",
+        type_="foreignkey",
+    )
+    op.drop_constraint(
+        "inputprompt__user_user_id_fkey",
+        "inputprompt__user",
+        type_="foreignkey",
+    )
+
+    # Recreate them without cascading
+    op.create_foreign_key(
+        "inputprompt__user_input_prompt_id_fkey",
+        "inputprompt__user",
+        "inputprompt",
+        ["input_prompt_id"],
+        ["id"],
+    )
+    op.create_foreign_key(
+        "inputprompt__user_user_id_fkey",
+        "inputprompt__user",
+        "user",
+        ["user_id"],
+        ["id"],
+    )

backend/alembic/versions/351faebd379d_add_curator_fields.py

@@ -0,0 +1,90 @@
+"""Add curator fields
+
+Revision ID: 351faebd379d
+Revises: ee3f4b47fad5
+Create Date: 2024-08-15 22:37:08.397052
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "351faebd379d"
+down_revision = "ee3f4b47fad5"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    # Add is_curator column to User__UserGroup table
+    op.add_column(
+        "user__user_group",
+        sa.Column("is_curator", sa.Boolean(), nullable=False, server_default="false"),
+    )
+
+    # Use batch mode to modify the enum type
+    with op.batch_alter_table("user", schema=None) as batch_op:
+        batch_op.alter_column(  # type: ignore[attr-defined]
+            "role",
+            type_=sa.Enum(
+                "BASIC",
+                "ADMIN",
+                "CURATOR",
+                "GLOBAL_CURATOR",
+                name="userrole",
+                native_enum=False,
+            ),
+            existing_type=sa.Enum("BASIC", "ADMIN", name="userrole", native_enum=False),
+            existing_nullable=False,
+        )
+    # Create the association table
+    op.create_table(
+        "credential__user_group",
+        sa.Column("credential_id", sa.Integer(), nullable=False),
+        sa.Column("user_group_id", sa.Integer(), nullable=False),
+        sa.ForeignKeyConstraint(
+            ["credential_id"],
+            ["credential.id"],
+        ),
+        sa.ForeignKeyConstraint(
+            ["user_group_id"],
+            ["user_group.id"],
+        ),
+        sa.PrimaryKeyConstraint("credential_id", "user_group_id"),
+    )
+    op.add_column(
+        "credential",
+        sa.Column(
+            "curator_public", sa.Boolean(), nullable=False, server_default="false"
+        ),
+    )
+
+
+def downgrade() -> None:
+    # Update existing records to ensure they fit within the BASIC/ADMIN roles
+    op.execute(
+        "UPDATE \"user\" SET role = 'ADMIN' WHERE role IN ('CURATOR', 'GLOBAL_CURATOR')"
+    )
+
+    # Remove is_curator column from User__UserGroup table
+    op.drop_column("user__user_group", "is_curator")
+
+    with op.batch_alter_table("user", schema=None) as batch_op:
+        batch_op.alter_column(  # type: ignore[attr-defined]
+            "role",
+            type_=sa.Enum(
+                "BASIC", "ADMIN", name="userrole", native_enum=False, length=20
+            ),
+            existing_type=sa.Enum(
+                "BASIC",
+                "ADMIN",
+                "CURATOR",
+                "GLOBAL_CURATOR",
+                name="userrole",
+                native_enum=False,
+            ),
+            existing_nullable=False,
+        )
+    # Drop the association table
+    op.drop_table("credential__user_group")
+    op.drop_column("credential", "curator_public")

backend/alembic/versions/35e518e0ddf4_properly_cascade.py

@@ -0,0 +1,121 @@
+"""properly_cascade
+
+Revision ID: 35e518e0ddf4
+Revises: 91a0a4d62b14
+Create Date: 2024-09-20 21:24:04.891018
+
+"""
+from alembic import op
+
+
+# revision identifiers, used by Alembic.
+revision = "35e518e0ddf4"
+down_revision = "91a0a4d62b14"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    # Update chat_message foreign key constraint
+    op.drop_constraint(
+        "chat_message_chat_session_id_fkey", "chat_message", type_="foreignkey"
+    )
+    op.create_foreign_key(
+        "chat_message_chat_session_id_fkey",
+        "chat_message",
+        "chat_session",
+        ["chat_session_id"],
+        ["id"],
+        ondelete="CASCADE",
+    )
+
+    # Update chat_message__search_doc foreign key constraints
+    op.drop_constraint(
+        "chat_message__search_doc_chat_message_id_fkey",
+        "chat_message__search_doc",
+        type_="foreignkey",
+    )
+    op.drop_constraint(
+        "chat_message__search_doc_search_doc_id_fkey",
+        "chat_message__search_doc",
+        type_="foreignkey",
+    )
+
+    op.create_foreign_key(
+        "chat_message__search_doc_chat_message_id_fkey",
+        "chat_message__search_doc",
+        "chat_message",
+        ["chat_message_id"],
+        ["id"],
+        ondelete="CASCADE",
+    )
+    op.create_foreign_key(
+        "chat_message__search_doc_search_doc_id_fkey",
+        "chat_message__search_doc",
+        "search_doc",
+        ["search_doc_id"],
+        ["id"],
+        ondelete="CASCADE",
+    )
+
+    # Add CASCADE delete for tool_call foreign key
+    op.drop_constraint("tool_call_message_id_fkey", "tool_call", type_="foreignkey")
+    op.create_foreign_key(
+        "tool_call_message_id_fkey",
+        "tool_call",
+        "chat_message",
+        ["message_id"],
+        ["id"],
+        ondelete="CASCADE",
+    )
+
+
+def downgrade() -> None:
+    # Revert chat_message foreign key constraint
+    op.drop_constraint(
+        "chat_message_chat_session_id_fkey", "chat_message", type_="foreignkey"
+    )
+    op.create_foreign_key(
+        "chat_message_chat_session_id_fkey",
+        "chat_message",
+        "chat_session",
+        ["chat_session_id"],
+        ["id"],
+    )
+
+    # Revert chat_message__search_doc foreign key constraints
+    op.drop_constraint(
+        "chat_message__search_doc_chat_message_id_fkey",
+        "chat_message__search_doc",
+        type_="foreignkey",
+    )
+    op.drop_constraint(
+        "chat_message__search_doc_search_doc_id_fkey",
+        "chat_message__search_doc",
+        type_="foreignkey",
+    )
+
+    op.create_foreign_key(
+        "chat_message__search_doc_chat_message_id_fkey",
+        "chat_message__search_doc",
+        "chat_message",
+        ["chat_message_id"],
+        ["id"],
+    )
+    op.create_foreign_key(
+        "chat_message__search_doc_search_doc_id_fkey",
+        "chat_message__search_doc",
+        "search_doc",
+        ["search_doc_id"],
+        ["id"],
+    )
+
+    # Revert tool_call foreign key constraint
+    op.drop_constraint("tool_call_message_id_fkey", "tool_call", type_="foreignkey")
+    op.create_foreign_key(
+        "tool_call_message_id_fkey",
+        "tool_call",
+        "chat_message",
+        ["message_id"],
+        ["id"],
+    )

backend/alembic/versions/35e6853a51d5_server_default_chosen_assistants.py

@@ -0,0 +1,64 @@
+"""server default chosen assistants
+
+Revision ID: 35e6853a51d5
+Revises: c99d76fcd298
+Create Date: 2024-09-13 13:20:32.885317
+
+"""
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = "35e6853a51d5"
+down_revision = "c99d76fcd298"
+branch_labels = None
+depends_on = None
+
+DEFAULT_ASSISTANTS = [-2, -1, 0]
+
+
+def upgrade() -> None:
+    # Step 1: Update any NULL values to the default value
+    # This upgrades existing users without ordered assistant
+    # to have default assistants set to visible assistants which are
+    # accessible by them.
+    op.execute(
+        """
+        UPDATE "user" u
+        SET chosen_assistants = (
+            SELECT jsonb_agg(
+                p.id ORDER BY
+                    COALESCE(p.display_priority, 2147483647) ASC,
+                    p.id ASC
+            )
+            FROM persona p
+            LEFT JOIN persona__user pu ON p.id = pu.persona_id AND pu.user_id = u.id
+            WHERE p.is_visible = true
+            AND (p.is_public = true OR pu.user_id IS NOT NULL)
+        )
+        WHERE chosen_assistants IS NULL
+        OR chosen_assistants = 'null'
+        OR jsonb_typeof(chosen_assistants) = 'null'
+        OR (jsonb_typeof(chosen_assistants) = 'string' AND chosen_assistants = '"null"')
+    """
+    )
+
+    # Step 2: Alter the column to make it non-nullable
+    op.alter_column(
+        "user",
+        "chosen_assistants",
+        type_=postgresql.JSONB(astext_type=sa.Text()),
+        nullable=False,
+        server_default=sa.text(f"'{DEFAULT_ASSISTANTS}'::jsonb"),
+    )
+
+
+def downgrade() -> None:
+    op.alter_column(
+        "user",
+        "chosen_assistants",
+        type_=postgresql.JSONB(astext_type=sa.Text()),
+        nullable=True,
+        server_default=None,
+    )

backend/alembic/versions/369644546676_add_composite_index_for_index_attempt_.py

@@ -0,0 +1,35 @@
+"""add composite index for index attempt time updated
+
+Revision ID: 369644546676
+Revises: 2955778aa44c
+Create Date: 2025-01-08 15:38:17.224380
+
+"""
+from alembic import op
+from sqlalchemy import text
+
+# revision identifiers, used by Alembic.
+revision = "369644546676"
+down_revision = "2955778aa44c"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.create_index(
+        "ix_index_attempt_ccpair_search_settings_time_updated",
+        "index_attempt",
+        [
+            "connector_credential_pair_id",
+            "search_settings_id",
+            text("time_updated DESC"),
+        ],
+        unique=False,
+    )
+
+
+def downgrade() -> None:
+    op.drop_index(
+        "ix_index_attempt_ccpair_search_settings_time_updated",
+        table_name="index_attempt",
+    )

backend/alembic/versions/3781a5eb12cb_add_chunk_stats_table.py

@@ -0,0 +1,51 @@
+"""add chunk stats table
+
+Revision ID: 3781a5eb12cb
+Revises: df46c75b714e
+Create Date: 2025-03-10 10:02:30.586666
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "3781a5eb12cb"
+down_revision = "df46c75b714e"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    op.create_table(
+        "chunk_stats",
+        sa.Column("id", sa.String(), primary_key=True, index=True),
+        sa.Column(
+            "document_id",
+            sa.String(),
+            sa.ForeignKey("document.id"),
+            nullable=False,
+            index=True,
+        ),
+        sa.Column("chunk_in_doc_id", sa.Integer(), nullable=False),
+        sa.Column("information_content_boost", sa.Float(), nullable=True),
+        sa.Column(
+            "last_modified",
+            sa.DateTime(timezone=True),
+            nullable=False,
+            index=True,
+            server_default=sa.func.now(),
+        ),
+        sa.Column("last_synced", sa.DateTime(timezone=True), nullable=True, index=True),
+        sa.UniqueConstraint(
+            "document_id", "chunk_in_doc_id", name="uq_chunk_stats_doc_chunk"
+        ),
+    )
+
+    op.create_index(
+        "ix_chunk_sync_status", "chunk_stats", ["last_modified", "last_synced"]
+    )
+
+
+def downgrade() -> None:
+    op.drop_index("ix_chunk_sync_status", table_name="chunk_stats")
+    op.drop_table("chunk_stats")

backend/alembic/versions/3879338f8ba1_add_tool_table.py

@@ -0,0 +1,45 @@
+"""Add tool table
+
+Revision ID: 3879338f8ba1
+Revises: f1c6478c3fd8
+Create Date: 2024-05-11 16:11:23.718084
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "3879338f8ba1"
+down_revision = "f1c6478c3fd8"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.create_table(
+        "tool",
+        sa.Column("id", sa.Integer(), nullable=False),
+        sa.Column("name", sa.String(), nullable=False),
+        sa.Column("description", sa.Text(), nullable=True),
+        sa.Column("in_code_tool_id", sa.String(), nullable=True),
+        sa.PrimaryKeyConstraint("id"),
+    )
+    op.create_table(
+        "persona__tool",
+        sa.Column("persona_id", sa.Integer(), nullable=False),
+        sa.Column("tool_id", sa.Integer(), nullable=False),
+        sa.ForeignKeyConstraint(
+            ["persona_id"],
+            ["persona.id"],
+        ),
+        sa.ForeignKeyConstraint(
+            ["tool_id"],
+            ["tool.id"],
+        ),
+        sa.PrimaryKeyConstraint("persona_id", "tool_id"),
+    )
+
+
+def downgrade() -> None:
+    op.drop_table("persona__tool")
+    op.drop_table("tool")

backend/alembic/versions/38eda64af7fe_add_chat_session_sharing.py

@@ -0,0 +1,41 @@
+"""Add chat session sharing
+
+Revision ID: 38eda64af7fe
+Revises: 776b3bbe9092
+Create Date: 2024-03-27 19:41:29.073594
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "38eda64af7fe"
+down_revision = "776b3bbe9092"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "chat_session",
+        sa.Column(
+            "shared_status",
+            sa.Enum(
+                "PUBLIC",
+                "PRIVATE",
+                name="chatsessionsharedstatus",
+                native_enum=False,
+            ),
+            nullable=True,
+        ),
+    )
+    op.execute("UPDATE chat_session SET shared_status='PRIVATE'")
+    op.alter_column(
+        "chat_session",
+        "shared_status",
+        nullable=False,
+    )
+
+
+def downgrade() -> None:
+    op.drop_column("chat_session", "shared_status")

backend/alembic/versions/3934b1bc7b62_update_github_connector_repo_name_to_.py

@@ -0,0 +1,125 @@
+"""Update GitHub connector repo_name to repositories
+
+Revision ID: 3934b1bc7b62
+Revises: b7c2b63c4a03
+Create Date: 2025-03-05 10:50:30.516962
+
+"""
+from alembic import op
+import sqlalchemy as sa
+import json
+import logging
+
+# revision identifiers, used by Alembic.
+revision = "3934b1bc7b62"
+down_revision = "b7c2b63c4a03"
+branch_labels = None
+depends_on = None
+
+logger = logging.getLogger("alembic.runtime.migration")
+
+
+def upgrade() -> None:
+    # Get all GitHub connectors
+    conn = op.get_bind()
+
+    # First get all GitHub connectors
+    github_connectors = conn.execute(
+        sa.text(
+            """
+            SELECT id, connector_specific_config
+            FROM connector
+            WHERE source = 'GITHUB'
+            """
+        )
+    ).fetchall()
+
+    # Update each connector's config
+    updated_count = 0
+    for connector_id, config in github_connectors:
+        try:
+            if not config:
+                logger.warning(f"Connector {connector_id} has no config, skipping")
+                continue
+
+            # Parse the config if it's a string
+            if isinstance(config, str):
+                config = json.loads(config)
+
+            if "repo_name" not in config:
+                continue
+
+            # Create new config with repositories instead of repo_name
+            new_config = dict(config)
+            repo_name_value = new_config.pop("repo_name")
+            new_config["repositories"] = repo_name_value
+
+            # Update the connector with the new config
+            conn.execute(
+                sa.text(
+                    """
+                    UPDATE connector
+                    SET connector_specific_config = :new_config
+                    WHERE id = :connector_id
+                    """
+                ),
+                {"connector_id": connector_id, "new_config": json.dumps(new_config)},
+            )
+            updated_count += 1
+        except Exception as e:
+            logger.error(f"Error updating connector {connector_id}: {str(e)}")
+
+
+def downgrade() -> None:
+    # Get all GitHub connectors
+    conn = op.get_bind()
+
+    logger.debug(
+        "Starting rollback of GitHub connectors from repositories to repo_name"
+    )
+
+    github_connectors = conn.execute(
+        sa.text(
+            """
+            SELECT id, connector_specific_config
+            FROM connector
+            WHERE source = 'GITHUB'
+            """
+        )
+    ).fetchall()
+
+    logger.debug(f"Found {len(github_connectors)} GitHub connectors to rollback")
+
+    # Revert each GitHub connector to use repo_name instead of repositories
+    reverted_count = 0
+    for connector_id, config in github_connectors:
+        try:
+            if not config:
+                continue
+
+            # Parse the config if it's a string
+            if isinstance(config, str):
+                config = json.loads(config)
+
+            if "repositories" not in config:
+                continue
+
+            # Create new config with repo_name instead of repositories
+            new_config = dict(config)
+            repositories_value = new_config.pop("repositories")
+            new_config["repo_name"] = repositories_value
+
+            # Update the connector with the new config
+            conn.execute(
+                sa.text(
+                    """
+                    UPDATE connector
+                    SET connector_specific_config = :new_config
+                    WHERE id = :connector_id
+                    """
+                ),
+                {"new_config": json.dumps(new_config), "connector_id": connector_id},
+            )
+            reverted_count += 1
+        except Exception as e:
+            logger.error(f"Error reverting connector {connector_id}: {str(e)}")

backend/alembic/versions/3a7802814195_add_alternate_assistant_to_chat_message.py

@@ -0,0 +1,35 @@
+"""add alternate assistant to chat message
+
+Revision ID: 3a7802814195
+Revises: 23957775e5f5
+Create Date: 2024-06-05 11:18:49.966333
+
+"""
+
+from alembic import op
+import sqlalchemy as sa
+
+
+# revision identifiers, used by Alembic.
+revision = "3a7802814195"
+down_revision = "23957775e5f5"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "chat_message", sa.Column("alternate_assistant_id", sa.Integer(), nullable=True)
+    )
+    op.create_foreign_key(
+        "fk_chat_message_persona",
+        "chat_message",
+        "persona",
+        ["alternate_assistant_id"],
+        ["id"],
+    )
+
+
+def downgrade() -> None:
+    op.drop_constraint("fk_chat_message_persona", "chat_message", type_="foreignkey")
+    op.drop_column("chat_message", "alternate_assistant_id")

backend/alembic/versions/3b25685ff73c_move_is_public_to_cc_pair.py

@@ -0,0 +1,49 @@
+"""Move is_public to cc_pair
+
+Revision ID: 3b25685ff73c
+Revises: e0a68a81d434
+Create Date: 2023-10-05 18:47:09.582849
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "3b25685ff73c"
+down_revision = "e0a68a81d434"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "connector_credential_pair",
+        sa.Column("is_public", sa.Boolean(), nullable=True),
+    )
+    # fill in is_public for existing rows
+    op.execute(
+        "UPDATE connector_credential_pair SET is_public = true WHERE is_public IS NULL"
+    )
+    op.alter_column("connector_credential_pair", "is_public", nullable=False)
+
+    op.add_column(
+        "credential",
+        sa.Column("is_admin", sa.Boolean(), nullable=True),
+    )
+    op.execute("UPDATE credential SET is_admin = true WHERE is_admin IS NULL")
+    op.alter_column("credential", "is_admin", nullable=False)
+
+    op.drop_column("credential", "public_doc")
+
+
+def downgrade() -> None:
+    op.add_column(
+        "credential",
+        sa.Column("public_doc", sa.Boolean(), nullable=True),
+    )
+    # setting public_doc to false for all existing rows to be safe
+    # NOTE: this is likely not the correct state of the world but it's the best we can do
+    op.execute("UPDATE credential SET public_doc = false WHERE public_doc IS NULL")
+    op.alter_column("credential", "public_doc", nullable=False)
+    op.drop_column("connector_credential_pair", "is_public")
+    op.drop_column("credential", "is_admin")

backend/alembic/versions/3bd4c84fe72f_improved_index.py

@@ -0,0 +1,98 @@
+"""improved index
+
+Revision ID: 3bd4c84fe72f
+Revises: 8f43500ee275
+Create Date: 2025-02-26 13:07:56.217791
+
+"""
+from alembic import op
+
+
+# revision identifiers, used by Alembic.
+revision = "3bd4c84fe72f"
+down_revision = "8f43500ee275"
+branch_labels = None
+depends_on = None
+
+
+# NOTE:
+# This migration addresses issues with the previous migration (8f43500ee275) which caused
+# an outage by creating an index without using CONCURRENTLY. This migration:
+#
+# 1. Creates more efficient full-text search capabilities using tsvector columns and GIN indexes
+# 2. Uses CONCURRENTLY for all index creation to prevent table locking
+# 3. Explicitly manages transactions with COMMIT statements to allow CONCURRENTLY to work
+# (see: https://www.postgresql.org/docs/9.4/sql-createindex.html#SQL-CREATEINDEX-CONCURRENTLY)
+# (see: https://github.com/sqlalchemy/alembic/issues/277)
+# 4. Adds indexes to both chat_message and chat_session tables for comprehensive search
+
+
+def upgrade() -> None:
+    # First, drop any existing indexes to avoid conflicts
+    op.execute("COMMIT")
+    op.execute("DROP INDEX CONCURRENTLY IF EXISTS idx_chat_message_tsv;")
+
+    op.execute("COMMIT")
+    op.execute("DROP INDEX CONCURRENTLY IF EXISTS idx_chat_session_desc_tsv;")
+
+    op.execute("COMMIT")
+    op.execute("DROP INDEX IF EXISTS idx_chat_message_message_lower;")
+
+    # Drop existing columns if they exist
+    op.execute("ALTER TABLE chat_message DROP COLUMN IF EXISTS message_tsv;")
+    op.execute("ALTER TABLE chat_session DROP COLUMN IF EXISTS description_tsv;")
+
+    # Create a GIN index for full-text search on chat_message.message
+    op.execute(
+        """
+        ALTER TABLE chat_message
+        ADD COLUMN message_tsv tsvector
+        GENERATED ALWAYS AS (to_tsvector('english', message)) STORED;
+        """
+    )
+
+    # Commit the current transaction before creating concurrent indexes
+    op.execute("COMMIT")
+
+    op.execute(
+        """
+        CREATE INDEX CONCURRENTLY IF NOT EXISTS idx_chat_message_tsv
+        ON chat_message
+        USING GIN (message_tsv)
+        """
+    )
+
+    # Also add a stored tsvector column for chat_session.description
+    op.execute(
+        """
+        ALTER TABLE chat_session
+        ADD COLUMN description_tsv tsvector
+        GENERATED ALWAYS AS (to_tsvector('english', coalesce(description, ''))) STORED;
+        """
+    )
+
+    # Commit again before creating the second concurrent index
+    op.execute("COMMIT")
+
+    op.execute(
+        """
+        CREATE INDEX CONCURRENTLY IF NOT EXISTS idx_chat_session_desc_tsv
+        ON chat_session
+        USING GIN (description_tsv)
+        """
+    )
+
+
+def downgrade() -> None:
+    # Drop the indexes first (use CONCURRENTLY for dropping too)
+    op.execute("COMMIT")
+    op.execute("DROP INDEX CONCURRENTLY IF EXISTS idx_chat_message_tsv;")
+
+    op.execute("COMMIT")
+    op.execute("DROP INDEX CONCURRENTLY IF EXISTS idx_chat_session_desc_tsv;")
+
+    # Then drop the columns
+    op.execute("ALTER TABLE chat_message DROP COLUMN IF EXISTS message_tsv;")
+    op.execute("ALTER TABLE chat_session DROP COLUMN IF EXISTS description_tsv;")
+
+    op.execute("DROP INDEX IF EXISTS idx_chat_message_message_lower;")

backend/alembic/versions/3c5e35aa9af0_polling_document_count.py

@@ -0,0 +1,52 @@
+"""Polling Document Count
+
+Revision ID: 3c5e35aa9af0
+Revises: 27c6ecc08586
+Create Date: 2023-06-14 23:45:51.760440
+
+"""
+import sqlalchemy as sa
+from alembic import op
+
+
+# revision identifiers, used by Alembic.
+revision = "3c5e35aa9af0"
+down_revision = "27c6ecc08586"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "connector_credential_pair",
+        sa.Column(
+            "last_successful_index_time",
+            sa.DateTime(timezone=True),
+            nullable=True,
+        ),
+    )
+    op.add_column(
+        "connector_credential_pair",
+        sa.Column(
+            "last_attempt_status",
+            sa.Enum(
+                "NOT_STARTED",
+                "IN_PROGRESS",
+                "SUCCESS",
+                "FAILED",
+                name="indexingstatus",
+                native_enum=False,
+            ),
+            nullable=False,
+        ),
+    )
+    op.add_column(
+        "connector_credential_pair",
+        sa.Column("total_docs_indexed", sa.Integer(), nullable=False),
+    )
+
+
+def downgrade() -> None:
+    op.drop_column("connector_credential_pair", "total_docs_indexed")
+    op.drop_column("connector_credential_pair", "last_attempt_status")
+    op.drop_column("connector_credential_pair", "last_successful_index_time")

backend/alembic/versions/3c6531f32351_add_back_input_prompts.py

@@ -0,0 +1,59 @@
+"""add back input prompts
+
+Revision ID: 3c6531f32351
+Revises: aeda5f2df4f6
+Create Date: 2025-01-13 12:49:51.705235
+
+"""
+from alembic import op
+import sqlalchemy as sa
+import fastapi_users_db_sqlalchemy
+
+# revision identifiers, used by Alembic.
+revision = "3c6531f32351"
+down_revision = "aeda5f2df4f6"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    op.create_table(
+        "inputprompt",
+        sa.Column("id", sa.Integer(), autoincrement=True, nullable=False),
+        sa.Column("prompt", sa.String(), nullable=False),
+        sa.Column("content", sa.String(), nullable=False),
+        sa.Column("active", sa.Boolean(), nullable=False),
+        sa.Column("is_public", sa.Boolean(), nullable=False),
+        sa.Column(
+            "user_id",
+            fastapi_users_db_sqlalchemy.generics.GUID(),
+            nullable=True,
+        ),
+        sa.ForeignKeyConstraint(
+            ["user_id"],
+            ["user.id"],
+        ),
+        sa.PrimaryKeyConstraint("id"),
+    )
+    op.create_table(
+        "inputprompt__user",
+        sa.Column("input_prompt_id", sa.Integer(), nullable=False),
+        sa.Column(
+            "user_id", fastapi_users_db_sqlalchemy.generics.GUID(), nullable=False
+        ),
+        sa.Column("disabled", sa.Boolean(), nullable=False, default=False),
+        sa.ForeignKeyConstraint(
+            ["input_prompt_id"],
+            ["inputprompt.id"],
+        ),
+        sa.ForeignKeyConstraint(
+            ["user_id"],
+            ["user.id"],
+        ),
+        sa.PrimaryKeyConstraint("input_prompt_id", "user_id"),
+    )
+
+
+def downgrade() -> None:
+    op.drop_table("inputprompt__user")
+    op.drop_table("inputprompt")

backend/alembic/versions/401c1ac29467_add_tables_for_ui_based_llm_.py

@@ -0,0 +1,49 @@
+"""Add tables for UI-based LLM configuration
+
+Revision ID: 401c1ac29467
+Revises: 703313b75876
+Create Date: 2024-04-13 18:07:29.153817
+
+"""
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = "401c1ac29467"
+down_revision = "703313b75876"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.create_table(
+        "llm_provider",
+        sa.Column("id", sa.Integer(), nullable=False),
+        sa.Column("name", sa.String(), nullable=False),
+        sa.Column("api_key", sa.String(), nullable=True),
+        sa.Column("api_base", sa.String(), nullable=True),
+        sa.Column("api_version", sa.String(), nullable=True),
+        sa.Column(
+            "custom_config",
+            postgresql.JSONB(astext_type=sa.Text()),
+            nullable=True,
+        ),
+        sa.Column("default_model_name", sa.String(), nullable=False),
+        sa.Column("fast_default_model_name", sa.String(), nullable=True),
+        sa.Column("is_default_provider", sa.Boolean(), unique=True, nullable=True),
+        sa.Column("model_names", postgresql.ARRAY(sa.String()), nullable=True),
+        sa.PrimaryKeyConstraint("id"),
+        sa.UniqueConstraint("name"),
+    )
+
+    op.add_column(
+        "persona",
+        sa.Column("llm_model_provider_override", sa.String(), nullable=True),
+    )
+
+
+def downgrade() -> None:
+    op.drop_column("persona", "llm_model_provider_override")
+
+    op.drop_table("llm_provider")

backend/alembic/versions/43cbbb3f5e6a_rename_index_origin_to_index_recursively.py

@@ -0,0 +1,42 @@
+"""Rename index_origin to index_recursively
+
+Revision ID: 1d6ad76d1f37
+Revises: e1392f05e840
+Create Date: 2024-08-01 12:38:54.466081
+
+"""
+from alembic import op
+
+# revision identifiers, used by Alembic.
+revision = "1d6ad76d1f37"
+down_revision = "e1392f05e840"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.execute(
+        """
+        UPDATE connector
+        SET connector_specific_config = jsonb_set(
+            connector_specific_config,
+            '{index_recursively}',
+            'true'::jsonb
+        ) - 'index_origin'
+        WHERE connector_specific_config ? 'index_origin'
+    """
+    )
+
+
+def downgrade() -> None:
+    op.execute(
+        """
+        UPDATE connector
+        SET connector_specific_config = jsonb_set(
+            connector_specific_config,
+            '{index_origin}',
+            connector_specific_config->'index_recursively'
+        ) - 'index_recursively'
+        WHERE connector_specific_config ? 'index_recursively'
+    """
+    )

backend/alembic/versions/44f856ae2a4a_add_cloud_embedding_model.py

@@ -0,0 +1,65 @@
+"""add cloud embedding model and update embedding_model
+
+Revision ID: 44f856ae2a4a
+Revises: d716b0791ddd
+Create Date: 2024-06-28 20:01:05.927647
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "44f856ae2a4a"
+down_revision = "d716b0791ddd"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    # Create embedding_provider table
+    op.create_table(
+        "embedding_provider",
+        sa.Column("id", sa.Integer(), nullable=False),
+        sa.Column("name", sa.String(), nullable=False),
+        sa.Column("api_key", sa.LargeBinary(), nullable=True),
+        sa.Column("default_model_id", sa.Integer(), nullable=True),
+        sa.PrimaryKeyConstraint("id"),
+        sa.UniqueConstraint("name"),
+    )
+
+    # Add cloud_provider_id to embedding_model table
+    op.add_column(
+        "embedding_model", sa.Column("cloud_provider_id", sa.Integer(), nullable=True)
+    )
+
+    # Add foreign key constraints
+    op.create_foreign_key(
+        "fk_embedding_model_cloud_provider",
+        "embedding_model",
+        "embedding_provider",
+        ["cloud_provider_id"],
+        ["id"],
+    )
+    op.create_foreign_key(
+        "fk_embedding_provider_default_model",
+        "embedding_provider",
+        "embedding_model",
+        ["default_model_id"],
+        ["id"],
+    )
+
+
+def downgrade() -> None:
+    # Remove foreign key constraints
+    op.drop_constraint(
+        "fk_embedding_model_cloud_provider", "embedding_model", type_="foreignkey"
+    )
+    op.drop_constraint(
+        "fk_embedding_provider_default_model", "embedding_provider", type_="foreignkey"
+    )
+
+    # Remove cloud_provider_id column
+    op.drop_column("embedding_model", "cloud_provider_id")
+
+    # Drop embedding_provider table
+    op.drop_table("embedding_provider")

backend/alembic/versions/4505fd7302e1_added_is_internet_to_dbdoc.py

@@ -0,0 +1,23 @@
+"""added is_internet to DBDoc
+
+Revision ID: 4505fd7302e1
+Revises: c18cdf4b497e
+Create Date: 2024-06-18 20:46:09.095034
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "4505fd7302e1"
+down_revision = "c18cdf4b497e"
+
+
+def upgrade() -> None:
+    op.add_column("search_doc", sa.Column("is_internet", sa.Boolean(), nullable=True))
+    op.add_column("tool", sa.Column("display_name", sa.String(), nullable=True))
+
+
+def downgrade() -> None:
+    op.drop_column("tool", "display_name")
+    op.drop_column("search_doc", "is_internet")

backend/alembic/versions/465f78d9b7f9_larger_access_tokens_for_oauth.py

@@ -0,0 +1,24 @@
+"""Larger Access Tokens for OAUTH
+
+Revision ID: 465f78d9b7f9
+Revises: 3c5e35aa9af0
+Create Date: 2023-07-18 17:33:40.365034
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+
+# revision identifiers, used by Alembic.
+revision = "465f78d9b7f9"
+down_revision = "3c5e35aa9af0"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.alter_column("oauth_account", "access_token", type_=sa.Text())
+
+
+def downgrade() -> None:
+    op.alter_column("oauth_account", "access_token", type_=sa.String(length=1024))

backend/alembic/versions/46625e4745d4_remove_native_enum.py

@@ -0,0 +1,31 @@
+"""Remove Native Enum
+
+Revision ID: 46625e4745d4
+Revises: 9d97fecfab7f
+Create Date: 2023-10-27 11:38:33.803145
+
+"""
+from alembic import op
+from sqlalchemy import String
+
+# revision identifiers, used by Alembic.
+revision = "46625e4745d4"
+down_revision = "9d97fecfab7f"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    # At this point, we directly changed some previous migrations,
+    # https://github.com/onyx-dot-app/onyx/pull/637
+    # Due to using Postgres native Enums, it caused some complications for first time users.
+    # To remove those complications, all Enums are only handled application side moving forward.
+    # This migration exists to ensure that existing users don't run into upgrade issues.
+    op.alter_column("index_attempt", "status", type_=String)
+    op.alter_column("connector_credential_pair", "last_attempt_status", type_=String)
+    op.execute("DROP TYPE IF EXISTS indexingstatus")
+
+
+def downgrade() -> None:
+    # We don't want Native Enums, do nothing
+    pass

backend/alembic/versions/46b7a812670f_fix_user__external_user_group_id_fk.py

@@ -0,0 +1,46 @@
+"""fix_user__external_user_group_id_fk
+
+Revision ID: 46b7a812670f
+Revises: f32615f71aeb
+Create Date: 2024-09-23 12:58:03.894038
+
+"""
+from alembic import op
+
+# revision identifiers, used by Alembic.
+revision = "46b7a812670f"
+down_revision = "f32615f71aeb"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    # Drop the existing primary key
+    op.drop_constraint(
+        "user__external_user_group_id_pkey",
+        "user__external_user_group_id",
+        type_="primary",
+    )
+
+    # Add the new composite primary key
+    op.create_primary_key(
+        "user__external_user_group_id_pkey",
+        "user__external_user_group_id",
+        ["user_id", "external_user_group_id", "cc_pair_id"],
+    )
+
+
+def downgrade() -> None:
+    # Drop the composite primary key
+    op.drop_constraint(
+        "user__external_user_group_id_pkey",
+        "user__external_user_group_id",
+        type_="primary",
+    )
+    # Delete all entries from the table
+    op.execute("DELETE FROM user__external_user_group_id")
+
+    # Recreate the original primary key on user_id
+    op.create_primary_key(
+        "user__external_user_group_id_pkey", "user__external_user_group_id", ["user_id"]
+    )

backend/alembic/versions/4738e4b3bae1_pg_file_store.py

@@ -0,0 +1,28 @@
+"""PG File Store
+
+Revision ID: 4738e4b3bae1
+Revises: e91df4e935ef
+Create Date: 2024-03-20 18:53:32.461518
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "4738e4b3bae1"
+down_revision = "e91df4e935ef"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.create_table(
+        "file_store",
+        sa.Column("file_name", sa.String(), nullable=False),
+        sa.Column("lobj_oid", sa.Integer(), nullable=False),
+        sa.PrimaryKeyConstraint("file_name"),
+    )
+
+
+def downgrade() -> None:
+    op.drop_table("file_store")

backend/alembic/versions/473a1a7ca408_add_display_model_names_to_llm_provider.py

@@ -0,0 +1,49 @@
+"""Add display_model_names to llm_provider
+
+Revision ID: 473a1a7ca408
+Revises: 325975216eb3
+Create Date: 2024-07-25 14:31:02.002917
+
+"""
+
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = "473a1a7ca408"
+down_revision = "325975216eb3"
+branch_labels: None = None
+depends_on: None = None
+
+default_models_by_provider = {
+    "openai": ["gpt-4", "gpt-4o", "gpt-4o-mini"],
+    "bedrock": [
+        "meta.llama3-1-70b-instruct-v1:0",
+        "meta.llama3-1-8b-instruct-v1:0",
+        "anthropic.claude-3-opus-20240229-v1:0",
+        "mistral.mistral-large-2402-v1:0",
+        "anthropic.claude-3-5-sonnet-20240620-v1:0",
+    ],
+    "anthropic": ["claude-3-opus-20240229", "claude-3-5-sonnet-20240620"],
+}
+
+
+def upgrade() -> None:
+    op.add_column(
+        "llm_provider",
+        sa.Column("display_model_names", postgresql.ARRAY(sa.String()), nullable=True),
+    )
+
+    connection = op.get_bind()
+    for provider, models in default_models_by_provider.items():
+        connection.execute(
+            sa.text(
+                "UPDATE llm_provider SET display_model_names = :models WHERE provider = :provider"
+            ),
+            {"models": models, "provider": provider},
+        )
+
+
+def downgrade() -> None:
+    op.drop_column("llm_provider", "display_model_names")

backend/alembic/versions/47433d30de82_create_indexattempt_table.py

@@ -0,0 +1,73 @@
+"""Create IndexAttempt table
+
+Revision ID: 47433d30de82
+Revises:
+Create Date: 2023-05-04 00:55:32.971991
+
+"""
+import sqlalchemy as sa
+from alembic import op
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = "47433d30de82"
+down_revision: None = None
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.create_table(
+        "index_attempt",
+        sa.Column("id", sa.Integer(), nullable=False),
+        # String type since python enum will change often
+        sa.Column(
+            "source",
+            sa.String(),
+            nullable=False,
+        ),
+        # String type to easily accomodate new ways of pulling
+        # in documents
+        sa.Column(
+            "input_type",
+            sa.String(),
+            nullable=False,
+        ),
+        sa.Column(
+            "connector_specific_config",
+            postgresql.JSONB(),
+            nullable=False,
+        ),
+        sa.Column(
+            "time_created",
+            sa.DateTime(timezone=True),
+            server_default=sa.text("now()"),
+            nullable=True,
+        ),
+        sa.Column(
+            "time_updated",
+            sa.DateTime(timezone=True),
+            server_default=sa.text("now()"),
+            server_onupdate=sa.text("now()"),  # type: ignore
+            nullable=True,
+        ),
+        sa.Column(
+            "status",
+            sa.Enum(
+                "NOT_STARTED",
+                "IN_PROGRESS",
+                "SUCCESS",
+                "FAILED",
+                name="indexingstatus",
+                native_enum=False,
+            ),
+            nullable=False,
+        ),
+        sa.Column("document_ids", postgresql.ARRAY(sa.String()), nullable=True),
+        sa.Column("error_msg", sa.String(), nullable=True),
+        sa.PrimaryKeyConstraint("id"),
+    )
+
+
+def downgrade() -> None:
+    op.drop_table("index_attempt")

backend/alembic/versions/475fcefe8826_add_name_to_api_key.py

@@ -0,0 +1,23 @@
+"""Add name to api_key
+
+Revision ID: 475fcefe8826
+Revises: ecab2b3f1a3b
+Create Date: 2024-04-11 11:05:18.414438
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "475fcefe8826"
+down_revision = "ecab2b3f1a3b"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.add_column("api_key", sa.Column("name", sa.String(), nullable=True))
+
+
+def downgrade() -> None:
+    op.drop_column("api_key", "name")

backend/alembic/versions/47e5bef3a1d7_add_persona_categories.py

@@ -0,0 +1,45 @@
+"""add persona categories
+
+Revision ID: 47e5bef3a1d7
+Revises: dfbe9e93d3c7
+Create Date: 2024-11-05 18:55:02.221064
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+
+# revision identifiers, used by Alembic.
+revision = "47e5bef3a1d7"
+down_revision = "dfbe9e93d3c7"
+branch_labels = None
+depends_on = None
+
+
+def upgrade() -> None:
+    # Create the persona_category table
+    op.create_table(
+        "persona_category",
+        sa.Column("id", sa.Integer(), nullable=False),
+        sa.Column("name", sa.String(), nullable=False),
+        sa.Column("description", sa.String(), nullable=True),
+        sa.PrimaryKeyConstraint("id"),
+        sa.UniqueConstraint("name"),
+    )
+
+    # Add category_id to persona table
+    op.add_column("persona", sa.Column("category_id", sa.Integer(), nullable=True))
+    op.create_foreign_key(
+        "fk_persona_category",
+        "persona",
+        "persona_category",
+        ["category_id"],
+        ["id"],
+        ondelete="SET NULL",
+    )
+
+
+def downgrade() -> None:
+    op.drop_constraint("persona_category_id_fkey", "persona", type_="foreignkey")
+    op.drop_column("persona", "category_id")
+    op.drop_table("persona_category")

backend/alembic/versions/48d14957fe80_add_support_for_custom_tools.py

@@ -0,0 +1,61 @@
+"""Add support for custom tools
+
+Revision ID: 48d14957fe80
+Revises: b85f02ec1308
+Create Date: 2024-06-09 14:58:19.946509
+
+"""
+from alembic import op
+import fastapi_users_db_sqlalchemy
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision = "48d14957fe80"
+down_revision = "b85f02ec1308"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "tool",
+        sa.Column(
+            "openapi_schema",
+            postgresql.JSONB(astext_type=sa.Text()),
+            nullable=True,
+        ),
+    )
+    op.add_column(
+        "tool",
+        sa.Column(
+            "user_id",
+            fastapi_users_db_sqlalchemy.generics.GUID(),
+            nullable=True,
+        ),
+    )
+    op.create_foreign_key("tool_user_fk", "tool", "user", ["user_id"], ["id"])
+
+    op.create_table(
+        "tool_call",
+        sa.Column("id", sa.Integer(), primary_key=True),
+        sa.Column("tool_id", sa.Integer(), nullable=False),
+        sa.Column("tool_name", sa.String(), nullable=False),
+        sa.Column(
+            "tool_arguments", postgresql.JSONB(astext_type=sa.Text()), nullable=False
+        ),
+        sa.Column(
+            "tool_result", postgresql.JSONB(astext_type=sa.Text()), nullable=False
+        ),
+        sa.Column(
+            "message_id", sa.Integer(), sa.ForeignKey("chat_message.id"), nullable=False
+        ),
+    )
+
+
+def downgrade() -> None:
+    op.drop_table("tool_call")
+
+    op.drop_constraint("tool_user_fk", "tool", type_="foreignkey")
+    op.drop_column("tool", "user_id")
+    op.drop_column("tool", "openapi_schema")

backend/alembic/versions/4a951134c801_moved_status_to_connector_credential_.py

@@ -0,0 +1,80 @@
+"""Moved status to connector credential pair
+
+Revision ID: 4a951134c801
+Revises: 7477a5f5d728
+Create Date: 2024-08-10 19:20:34.527559
+
+"""
+from alembic import op
+import sqlalchemy as sa
+
+# revision identifiers, used by Alembic.
+revision = "4a951134c801"
+down_revision = "7477a5f5d728"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.add_column(
+        "connector_credential_pair",
+        sa.Column(
+            "status",
+            sa.Enum(
+                "ACTIVE",
+                "PAUSED",
+                "DELETING",
+                name="connectorcredentialpairstatus",
+                native_enum=False,
+            ),
+            nullable=True,
+        ),
+    )
+
+    # Update status of connector_credential_pair based on connector's disabled status
+    op.execute(
+        """
+        UPDATE connector_credential_pair
+        SET status = CASE
+            WHEN (
+                SELECT disabled
+                FROM connector
+                WHERE connector.id = connector_credential_pair.connector_id
+            ) = FALSE THEN 'ACTIVE'
+            ELSE 'PAUSED'
+        END
+        """
+    )
+
+    # Make the status column not nullable after setting values
+    op.alter_column("connector_credential_pair", "status", nullable=False)
+
+    op.drop_column("connector", "disabled")
+
+
+def downgrade() -> None:
+    op.add_column(
+        "connector",
+        sa.Column("disabled", sa.BOOLEAN(), autoincrement=False, nullable=True),
+    )
+
+    # Update disabled status of connector based on connector_credential_pair's status
+    op.execute(
+        """
+        UPDATE connector
+        SET disabled = CASE
+            WHEN EXISTS (
+                SELECT 1
+                FROM connector_credential_pair
+                WHERE connector_credential_pair.connector_id = connector.id
+                AND connector_credential_pair.status = 'ACTIVE'
+            ) THEN FALSE
+            ELSE TRUE
+        END
+        """
+    )
+
+    # Make the disabled column not nullable after setting values
+    op.alter_column("connector", "disabled", nullable=False)
+
+    op.drop_column("connector_credential_pair", "status")

backend/alembic/versions/4b08d97e175a_change_default_prune_freq.py

@@ -0,0 +1,34 @@
+"""change default prune_freq
+
+Revision ID: 4b08d97e175a
+Revises: d9ec13955951
+Create Date: 2024-08-20 15:28:52.993827
+
+"""
+from alembic import op
+
+# revision identifiers, used by Alembic.
+revision = "4b08d97e175a"
+down_revision = "d9ec13955951"
+branch_labels: None = None
+depends_on: None = None
+
+
+def upgrade() -> None:
+    op.execute(
+        """
+        UPDATE connector
+        SET prune_freq = 2592000
+        WHERE prune_freq = 86400
+        """
+    )
+
+
+def downgrade() -> None:
+    op.execute(
+        """
+        UPDATE connector
+        SET prune_freq = 86400
+        WHERE prune_freq = 2592000
+        """
+    )

backend/alembic/versions/4d58345da04a_lowercase_user_emails.py

@@ -0,0 +1,64 @@
+"""lowercase_user_emails
+
+Revision ID: 4d58345da04a
+Revises: f1ca58b2f2ec
+Create Date: 2025-01-29 07:48:46.784041
+
+"""
+import logging
+from typing import cast
+from alembic import op
+from sqlalchemy.exc import IntegrityError
+from sqlalchemy.sql import text
+
+
+# revision identifiers, used by Alembic.
+revision = "4d58345da04a"
+down_revision = "f1ca58b2f2ec"
+branch_labels = None
+depends_on = None
+
+logger = logging.getLogger("alembic.runtime.migration")
+
+
+def upgrade() -> None:
+    """Conflicts on lowercasing will result in the uppercased email getting a
+    unique integer suffix when converted to lowercase."""
+
+    connection = op.get_bind()
+
+    # Fetch all user emails that are not already lowercase
+    user_emails = connection.execute(
+        text('SELECT id, email FROM "user" WHERE email != LOWER(email)')
+    ).fetchall()
+
+    for user_id, email in user_emails:
+        email = cast(str, email)
+        username, domain = email.rsplit("@", 1)
+        new_email = f"{username.lower()}@{domain.lower()}"
+        attempt = 1
+
+        while True:
+            try:
+                # Try updating the email
+                connection.execute(
+                    text('UPDATE "user" SET email = :new_email WHERE id = :user_id'),
+                    {"new_email": new_email, "user_id": user_id},
+                )
+                break  # Success, exit loop
+            except IntegrityError:
+                next_email = f"{username.lower()}_{attempt}@{domain.lower()}"
+                # Email conflict occurred, append `_1`, `_2`, etc., to the username
+                logger.warning(
+                    f"Conflict while lowercasing email: "
+                    f"old_email={email} "
+                    f"conflicting_email={new_email} "
+                    f"next_email={next_email}"
+                )
+                new_email = next_email
+                attempt += 1
+
+
+def downgrade() -> None:
+    # Cannot restore original case of emails
+    pass