p

.github/workflows/docker-build-push-cloud-web-container-on-tag.yml

@@ -67,7 +67,6 @@ jobs:
             NEXT_PUBLIC_SENTRY_DSN=${{ secrets.SENTRY_DSN }}
             NEXT_PUBLIC_GTM_ENABLED=true
             NEXT_PUBLIC_FORGOT_PASSWORD_ENABLED=true
-            NEXT_PUBLIC_INCLUDE_ERROR_POPUP_SUPPORT_LINK=true
             NODE_OPTIONS=--max-old-space-size=8192
           # needed due to weird interactions with the builds for different platforms
           no-cache: true

.github/workflows/pr-chromatic-tests.yml

@@ -8,8 +8,6 @@ on: push
 env:
   OPENAI_API_KEY: ${{ secrets.OPENAI_API_KEY }}
   SLACK_BOT_TOKEN: ${{ secrets.SLACK_BOT_TOKEN }}
-  GEN_AI_API_KEY: ${{ secrets.OPENAI_API_KEY }}
-  MOCK_LLM_RESPONSE: true
 
 jobs:
   playwright-tests:

.github/workflows/pr-helm-chart-testing.yml

@@ -21,10 +21,10 @@ jobs:
     - name: Set up Helm
       uses: azure/setup-helm@v4.2.0
       with:
-        version: v3.17.0
+        version: v3.14.4
       
     - name: Set up chart-testing
-      uses: helm/chart-testing-action@v2.7.0
+      uses: helm/chart-testing-action@v2.6.1
 
     # even though we specify chart-dirs in ct.yaml, it isn't used by ct for the list-changed command...
     - name: Run chart-testing (list-changed)
@@ -37,6 +37,22 @@ jobs:
           echo "changed=true" >> "$GITHUB_OUTPUT"
         fi
 
+#     rkuo: I don't think we need python?
+#     - name: Set up Python
+#       uses: actions/setup-python@v5
+#       with:
+#         python-version: '3.11'
+#         cache: 'pip'
+#         cache-dependency-path: |
+#           backend/requirements/default.txt
+#           backend/requirements/dev.txt
+#           backend/requirements/model_server.txt
+#     - run: |
+#         python -m pip install --upgrade pip
+#         pip install --retries 5 --timeout 30 -r backend/requirements/default.txt
+#         pip install --retries 5 --timeout 30 -r backend/requirements/dev.txt
+#         pip install --retries 5 --timeout 30 -r backend/requirements/model_server.txt
+
     # lint all charts if any changes were detected
     - name: Run chart-testing (lint)
       if: steps.list-changed.outputs.changed == 'true'
@@ -46,7 +62,7 @@ jobs:
 
     - name: Create kind cluster
       if: steps.list-changed.outputs.changed == 'true'
-      uses: helm/kind-action@v1.12.0
+      uses: helm/kind-action@v1.10.0
 
     - name: Run chart-testing (install)
       if: steps.list-changed.outputs.changed == 'true'

.github/workflows/pr-python-connector-tests.yml

@@ -39,12 +39,6 @@ env:
   AIRTABLE_TEST_TABLE_ID: ${{ secrets.AIRTABLE_TEST_TABLE_ID }}
   AIRTABLE_TEST_TABLE_NAME: ${{ secrets.AIRTABLE_TEST_TABLE_NAME }}
   AIRTABLE_ACCESS_TOKEN: ${{ secrets.AIRTABLE_ACCESS_TOKEN }}
-  # Sharepoint
-  SHAREPOINT_CLIENT_ID: ${{ secrets.SHAREPOINT_CLIENT_ID }}
-  SHAREPOINT_CLIENT_SECRET: ${{ secrets.SHAREPOINT_CLIENT_SECRET }}
-  SHAREPOINT_CLIENT_DIRECTORY_ID: ${{ secrets.SHAREPOINT_CLIENT_DIRECTORY_ID }}
-  SHAREPOINT_SITE: ${{ secrets.SHAREPOINT_SITE }}
-
 jobs:
   connectors-check:
     # See https://runs-on.com/runners/linux/

.gitignore

@@ -7,6 +7,4 @@
 .vscode/
 *.sw?
 /backend/tests/regression/answer_quality/search_test_config.yaml
-/web/test-results/
-backend/onyx/agent_search/main/test_data.json
-backend/tests/regression/answer_quality/test_data.json
+/web/test-results/

.vscode/env_template.txt

@@ -52,9 +52,3 @@ BING_API_KEY=<REPLACE THIS>
 # Enable the full set of Danswer Enterprise Edition features
 # NOTE: DO NOT ENABLE THIS UNLESS YOU HAVE A PAID ENTERPRISE LICENSE (or if you are using this for local testing/development)
 ENABLE_PAID_ENTERPRISE_EDITION_FEATURES=False
-
-# Agent Search configs  # TODO: Remove give proper namings
-AGENT_RETRIEVAL_STATS=False   # Note: This setting will incur substantial re-ranking effort
-AGENT_RERANKING_STATS=True
-AGENT_MAX_QUERY_RETRIEVAL_RESULTS=20
-AGENT_RERANKING_MAX_QUERY_RETRIEVAL_RESULTS=20

README.md

@@ -124,7 +124,7 @@ There are two editions of Onyx:
 To try the Onyx Enterprise Edition:
 
 1. Checkout our [Cloud product](https://cloud.onyx.app/signup).
-2. For self-hosting, contact us at [founders@onyx.app](mailto:founders@onyx.app) or book a call with us on our [Cal](https://cal.com/team/onyx/founders).
+2. For self-hosting, contact us at [founders@onyx.app](mailto:founders@onyx.app) or book a call with us on our [Cal](https://cal.com/team/danswer/founders).
 
 ## 💡 Contributing
 

backend/Dockerfile

@@ -101,8 +101,7 @@ COPY ./alembic_tenants /app/alembic_tenants
 COPY ./alembic.ini /app/alembic.ini
 COPY supervisord.conf /usr/etc/supervisord.conf
 
-# Escape hatch scripts
-COPY ./scripts/debugging /app/scripts/debugging
+# Escape hatch
 COPY ./scripts/force_delete_connector_by_id.py /app/scripts/force_delete_connector_by_id.py
 
 # Put logo in assets

backend/alembic/versions/2f80c6a2550f_add_chat_session_specific_temperature_.py

@@ -1,36 +0,0 @@
-"""add chat session specific temperature override
-
-Revision ID: 2f80c6a2550f
-Revises: 33ea50e88f24
-Create Date: 2025-01-31 10:30:27.289646
-
-"""
-from alembic import op
-import sqlalchemy as sa
-
-
-# revision identifiers, used by Alembic.
-revision = "2f80c6a2550f"
-down_revision = "33ea50e88f24"
-branch_labels = None
-depends_on = None
-
-
-def upgrade() -> None:
-    op.add_column(
-        "chat_session", sa.Column("temperature_override", sa.Float(), nullable=True)
-    )
-    op.add_column(
-        "user",
-        sa.Column(
-            "temperature_override_enabled",
-            sa.Boolean(),
-            nullable=False,
-            server_default=sa.false(),
-        ),
-    )
-
-
-def downgrade() -> None:
-    op.drop_column("chat_session", "temperature_override")
-    op.drop_column("user", "temperature_override_enabled")

backend/alembic/versions/33ea50e88f24_foreign_key_input_prompts.py

@@ -1,80 +0,0 @@
-"""foreign key input prompts
-
-Revision ID: 33ea50e88f24
-Revises: a6df6b88ef81
-Create Date: 2025-01-29 10:54:22.141765
-
-"""
-from alembic import op
-
-
-# revision identifiers, used by Alembic.
-revision = "33ea50e88f24"
-down_revision = "a6df6b88ef81"
-branch_labels = None
-depends_on = None
-
-
-def upgrade() -> None:
-    # Safely drop constraints if exists
-    op.execute(
-        """
-        ALTER TABLE inputprompt__user
-        DROP CONSTRAINT IF EXISTS inputprompt__user_input_prompt_id_fkey
-        """
-    )
-    op.execute(
-        """
-        ALTER TABLE inputprompt__user
-        DROP CONSTRAINT IF EXISTS inputprompt__user_user_id_fkey
-        """
-    )
-
-    # Recreate with ON DELETE CASCADE
-    op.create_foreign_key(
-        "inputprompt__user_input_prompt_id_fkey",
-        "inputprompt__user",
-        "inputprompt",
-        ["input_prompt_id"],
-        ["id"],
-        ondelete="CASCADE",
-    )
-
-    op.create_foreign_key(
-        "inputprompt__user_user_id_fkey",
-        "inputprompt__user",
-        "user",
-        ["user_id"],
-        ["id"],
-        ondelete="CASCADE",
-    )
-
-
-def downgrade() -> None:
-    # Drop the new FKs with ondelete
-    op.drop_constraint(
-        "inputprompt__user_input_prompt_id_fkey",
-        "inputprompt__user",
-        type_="foreignkey",
-    )
-    op.drop_constraint(
-        "inputprompt__user_user_id_fkey",
-        "inputprompt__user",
-        type_="foreignkey",
-    )
-
-    # Recreate them without cascading
-    op.create_foreign_key(
-        "inputprompt__user_input_prompt_id_fkey",
-        "inputprompt__user",
-        "inputprompt",
-        ["input_prompt_id"],
-        ["id"],
-    )
-    op.create_foreign_key(
-        "inputprompt__user_user_id_fkey",
-        "inputprompt__user",
-        "user",
-        ["user_id"],
-        ["id"],
-    )

backend/alembic/versions/4d58345da04a_lowercase_user_emails.py

@@ -1,37 +0,0 @@
-"""lowercase_user_emails
-
-Revision ID: 4d58345da04a
-Revises: f1ca58b2f2ec
-Create Date: 2025-01-29 07:48:46.784041
-
-"""
-from alembic import op
-from sqlalchemy.sql import text
-
-
-# revision identifiers, used by Alembic.
-revision = "4d58345da04a"
-down_revision = "f1ca58b2f2ec"
-branch_labels = None
-depends_on = None
-
-
-def upgrade() -> None:
-    # Get database connection
-    connection = op.get_bind()
-
-    # Update all user emails to lowercase
-    connection.execute(
-        text(
-            """
-            UPDATE "user"
-            SET email = LOWER(email)
-            WHERE email != LOWER(email)
-            """
-        )
-    )
-
-
-def downgrade() -> None:
-    # Cannot restore original case of emails
-    pass

backend/alembic/versions/98a5008d8711_agent_tracking.py

@@ -1,107 +0,0 @@
-"""agent_tracking
-
-Revision ID: 98a5008d8711
-Revises: 2f80c6a2550f
-Create Date: 2025-01-29 17:00:00.000001
-
-"""
-from alembic import op
-import sqlalchemy as sa
-from sqlalchemy.dialects import postgresql
-from sqlalchemy.dialects.postgresql import UUID
-
-# revision identifiers, used by Alembic.
-revision = "98a5008d8711"
-down_revision = "2f80c6a2550f"
-branch_labels = None
-depends_on = None
-
-
-def upgrade() -> None:
-    op.create_table(
-        "agent__search_metrics",
-        sa.Column("id", sa.Integer(), nullable=False),
-        sa.Column("user_id", postgresql.UUID(as_uuid=True), nullable=True),
-        sa.Column("persona_id", sa.Integer(), nullable=True),
-        sa.Column("agent_type", sa.String(), nullable=False),
-        sa.Column("start_time", sa.DateTime(timezone=True), nullable=False),
-        sa.Column("base_duration_s", sa.Float(), nullable=False),
-        sa.Column("full_duration_s", sa.Float(), nullable=False),
-        sa.Column("base_metrics", postgresql.JSONB(), nullable=True),
-        sa.Column("refined_metrics", postgresql.JSONB(), nullable=True),
-        sa.Column("all_metrics", postgresql.JSONB(), nullable=True),
-        sa.ForeignKeyConstraint(
-            ["persona_id"],
-            ["persona.id"],
-        ),
-        sa.ForeignKeyConstraint(["user_id"], ["user.id"], ondelete="CASCADE"),
-        sa.PrimaryKeyConstraint("id"),
-    )
-
-    # Create sub_question table
-    op.create_table(
-        "agent__sub_question",
-        sa.Column("id", sa.Integer, primary_key=True),
-        sa.Column("primary_question_id", sa.Integer, sa.ForeignKey("chat_message.id")),
-        sa.Column(
-            "chat_session_id", UUID(as_uuid=True), sa.ForeignKey("chat_session.id")
-        ),
-        sa.Column("sub_question", sa.Text),
-        sa.Column(
-            "time_created", sa.DateTime(timezone=True), server_default=sa.func.now()
-        ),
-        sa.Column("sub_answer", sa.Text),
-        sa.Column("sub_question_doc_results", postgresql.JSONB(), nullable=True),
-        sa.Column("level", sa.Integer(), nullable=False),
-        sa.Column("level_question_num", sa.Integer(), nullable=False),
-    )
-
-    # Create sub_query table
-    op.create_table(
-        "agent__sub_query",
-        sa.Column("id", sa.Integer, primary_key=True),
-        sa.Column(
-            "parent_question_id", sa.Integer, sa.ForeignKey("agent__sub_question.id")
-        ),
-        sa.Column(
-            "chat_session_id", UUID(as_uuid=True), sa.ForeignKey("chat_session.id")
-        ),
-        sa.Column("sub_query", sa.Text),
-        sa.Column(
-            "time_created", sa.DateTime(timezone=True), server_default=sa.func.now()
-        ),
-    )
-
-    # Create sub_query__search_doc association table
-    op.create_table(
-        "agent__sub_query__search_doc",
-        sa.Column(
-            "sub_query_id",
-            sa.Integer,
-            sa.ForeignKey("agent__sub_query.id"),
-            primary_key=True,
-        ),
-        sa.Column(
-            "search_doc_id",
-            sa.Integer,
-            sa.ForeignKey("search_doc.id"),
-            primary_key=True,
-        ),
-    )
-
-    op.add_column(
-        "chat_message",
-        sa.Column(
-            "refined_answer_improvement",
-            sa.Boolean(),
-            nullable=True,
-        ),
-    )
-
-
-def downgrade() -> None:
-    op.drop_column("chat_message", "refined_answer_improvement")
-    op.drop_table("agent__sub_query__search_doc")
-    op.drop_table("agent__sub_query")
-    op.drop_table("agent__sub_question")
-    op.drop_table("agent__search_metrics")

backend/alembic/versions/a6df6b88ef81_remove_recent_assistants.py

@@ -1,29 +0,0 @@
-"""remove recent assistants
-
-Revision ID: a6df6b88ef81
-Revises: 4d58345da04a
-Create Date: 2025-01-29 10:25:52.790407
-
-"""
-from alembic import op
-import sqlalchemy as sa
-from sqlalchemy.dialects import postgresql
-
-# revision identifiers, used by Alembic.
-revision = "a6df6b88ef81"
-down_revision = "4d58345da04a"
-branch_labels = None
-depends_on = None
-
-
-def upgrade() -> None:
-    op.drop_column("user", "recent_assistants")
-
-
-def downgrade() -> None:
-    op.add_column(
-        "user",
-        sa.Column(
-            "recent_assistants", postgresql.JSONB(), server_default="[]", nullable=False
-        ),
-    )

backend/alembic/versions/eaa3b5593925_add_default_slack_channel_config.py

@@ -1,80 +0,0 @@
-"""add default slack channel config
-
-Revision ID: eaa3b5593925
-Revises: 98a5008d8711
-Create Date: 2025-02-03 18:07:56.552526
-
-"""
-from alembic import op
-import sqlalchemy as sa
-
-
-# revision identifiers, used by Alembic.
-revision = "eaa3b5593925"
-down_revision = "98a5008d8711"
-branch_labels = None
-depends_on = None
-
-
-def upgrade() -> None:
-    # Add is_default column
-    op.add_column(
-        "slack_channel_config",
-        sa.Column("is_default", sa.Boolean(), nullable=False, server_default="false"),
-    )
-
-    op.create_index(
-        "ix_slack_channel_config_slack_bot_id_default",
-        "slack_channel_config",
-        ["slack_bot_id", "is_default"],
-        unique=True,
-        postgresql_where=sa.text("is_default IS TRUE"),
-    )
-
-    # Create default channel configs for existing slack bots without one
-    conn = op.get_bind()
-    slack_bots = conn.execute(sa.text("SELECT id FROM slack_bot")).fetchall()
-
-    for slack_bot in slack_bots:
-        slack_bot_id = slack_bot[0]
-        existing_default = conn.execute(
-            sa.text(
-                "SELECT id FROM slack_channel_config WHERE slack_bot_id = :bot_id AND is_default = TRUE"
-            ),
-            {"bot_id": slack_bot_id},
-        ).fetchone()
-
-        if not existing_default:
-            conn.execute(
-                sa.text(
-                    """
-                    INSERT INTO slack_channel_config (
-                        slack_bot_id, persona_id, channel_config, enable_auto_filters, is_default
-                    ) VALUES (
-                        :bot_id, NULL,
-                        '{"channel_name": null, '
-                        '"respond_member_group_list": [], '
-                        '"answer_filters": [], '
-                        '"follow_up_tags": [], '
-                        '"respond_tag_only": true}',
-                        FALSE, TRUE
-                    )
-                """
-                ),
-                {"bot_id": slack_bot_id},
-            )
-
-
-def downgrade() -> None:
-    # Delete default slack channel configs
-    conn = op.get_bind()
-    conn.execute(sa.text("DELETE FROM slack_channel_config WHERE is_default = TRUE"))
-
-    # Remove index
-    op.drop_index(
-        "ix_slack_channel_config_slack_bot_id_default",
-        table_name="slack_channel_config",
-    )
-
-    # Remove is_default column
-    op.drop_column("slack_channel_config", "is_default")

backend/alembic/versions/f5437cc136c5_delete_non_search_assistants.py

@@ -1,53 +0,0 @@
-"""delete non-search assistants
-
-Revision ID: f5437cc136c5
-Revises: eaa3b5593925
-Create Date: 2025-02-04 16:17:15.677256
-
-"""
-from alembic import op
-
-
-# revision identifiers, used by Alembic.
-revision = "f5437cc136c5"
-down_revision = "eaa3b5593925"
-branch_labels = None
-depends_on = None
-
-
-def upgrade() -> None:
-    pass
-
-
-def downgrade() -> None:
-    # Fix: split the statements into multiple op.execute() calls
-    op.execute(
-        """
-        WITH personas_without_search AS (
-            SELECT p.id
-            FROM persona p
-            LEFT JOIN persona__tool pt ON p.id = pt.persona_id
-            LEFT JOIN tool t ON pt.tool_id = t.id
-            GROUP BY p.id
-            HAVING COUNT(CASE WHEN t.in_code_tool_id = 'run_search' THEN 1 END) = 0
-        )
-        UPDATE slack_channel_config
-        SET persona_id = NULL
-        WHERE is_default = TRUE AND persona_id IN (SELECT id FROM personas_without_search)
-        """
-    )
-
-    op.execute(
-        """
-        WITH personas_without_search AS (
-            SELECT p.id
-            FROM persona p
-            LEFT JOIN persona__tool pt ON p.id = pt.persona_id
-            LEFT JOIN tool t ON pt.tool_id = t.id
-            GROUP BY p.id
-            HAVING COUNT(CASE WHEN t.in_code_tool_id = 'run_search' THEN 1 END) = 0
-        )
-        DELETE FROM slack_channel_config
-        WHERE is_default = FALSE AND persona_id IN (SELECT id FROM personas_without_search)
-        """
-    )

backend/ee/onyx/background/celery/apps/primary.py

@@ -32,7 +32,6 @@ def perform_ttl_management_task(
 
 @celery_app.task(
     name="check_ttl_management_task",
-    ignore_result=True,
     soft_time_limit=JOB_TIMEOUT,
 )
 def check_ttl_management_task(*, tenant_id: str | None) -> None:
@@ -57,7 +56,6 @@ def check_ttl_management_task(*, tenant_id: str | None) -> None:
 
 @celery_app.task(
     name="autogenerate_usage_report_task",
-    ignore_result=True,
     soft_time_limit=JOB_TIMEOUT,
 )
 def autogenerate_usage_report_task(*, tenant_id: str | None) -> None:

backend/ee/onyx/db/persona.py

@@ -2,11 +2,8 @@ from uuid import UUID
 
 from sqlalchemy.orm import Session
 
-from onyx.configs.constants import NotificationType
 from onyx.db.models import Persona__User
 from onyx.db.models import Persona__UserGroup
-from onyx.db.notification import create_notification
-from onyx.server.features.persona.models import PersonaSharedNotificationData
 
 
 def make_persona_private(
@@ -26,14 +23,6 @@ def make_persona_private(
         for user_uuid in user_ids:
             db_session.add(Persona__User(persona_id=persona_id, user_id=user_uuid))
 
-            create_notification(
-                user_id=user_uuid,
-                notif_type=NotificationType.PERSONA_SHARED,
-                db_session=db_session,
-                additional_data=PersonaSharedNotificationData(
-                    persona_id=persona_id,
-                ).model_dump(),
-            )
     if group_ids:
         for group_id in group_ids:
             db_session.add(

backend/ee/onyx/db/user_group.py

@@ -218,14 +218,14 @@ def fetch_user_groups_for_user(
     return db_session.scalars(stmt).all()
 
 
-def construct_document_id_select_by_usergroup(
+def construct_document_select_by_usergroup(
     user_group_id: int,
 ) -> Select:
     """This returns a statement that should be executed using
     .yield_per() to minimize overhead. The primary consumers of this function
     are background processing task generators."""
     stmt = (
-        select(Document.id)
+        select(Document)
         .join(
             DocumentByConnectorCredentialPair,
             Document.id == DocumentByConnectorCredentialPair.id,

backend/ee/onyx/external_permissions/confluence/doc_sync.py

@@ -13,7 +13,6 @@ from onyx.connectors.confluence.onyx_confluence import OnyxConfluence
 from onyx.connectors.confluence.utils import get_user_email_from_username__server
 from onyx.connectors.models import SlimDocument
 from onyx.db.models import ConnectorCredentialPair
-from onyx.indexing.indexing_heartbeat import IndexingHeartbeatInterface
 from onyx.utils.logger import setup_logger
 
 logger = setup_logger()
@@ -258,7 +257,6 @@ def _fetch_all_page_restrictions(
     slim_docs: list[SlimDocument],
     space_permissions_by_space_key: dict[str, ExternalAccess],
     is_cloud: bool,
-    callback: IndexingHeartbeatInterface | None,
 ) -> list[DocExternalAccess]:
     """
     For all pages, if a page has restrictions, then use those restrictions.
@@ -267,12 +265,6 @@ def _fetch_all_page_restrictions(
     document_restrictions: list[DocExternalAccess] = []
 
     for slim_doc in slim_docs:
-        if callback:
-            if callback.should_stop():
-                raise RuntimeError("confluence_doc_sync: Stop signal detected")
-
-            callback.progress("confluence_doc_sync:fetch_all_page_restrictions", 1)
-
         if slim_doc.perm_sync_data is None:
             raise ValueError(
                 f"No permission sync data found for document {slim_doc.id}"
@@ -342,7 +334,7 @@ def _fetch_all_page_restrictions(
 
 
 def confluence_doc_sync(
-    cc_pair: ConnectorCredentialPair, callback: IndexingHeartbeatInterface | None
+    cc_pair: ConnectorCredentialPair,
 ) -> list[DocExternalAccess]:
     """
     Adds the external permissions to the documents in postgres
@@ -367,12 +359,6 @@ def confluence_doc_sync(
     logger.debug("Fetching all slim documents from confluence")
     for doc_batch in confluence_connector.retrieve_all_slim_documents():
         logger.debug(f"Got {len(doc_batch)} slim documents from confluence")
-        if callback:
-            if callback.should_stop():
-                raise RuntimeError("confluence_doc_sync: Stop signal detected")
-
-            callback.progress("confluence_doc_sync", 1)
-
         slim_docs.extend(doc_batch)
 
     logger.debug("Fetching all page restrictions for space")
@@ -381,5 +367,4 @@ def confluence_doc_sync(
         slim_docs=slim_docs,
         space_permissions_by_space_key=space_permissions_by_space_key,
         is_cloud=is_cloud,
-        callback=callback,
     )

backend/ee/onyx/external_permissions/confluence/group_sync.py

@@ -14,8 +14,6 @@ def _build_group_member_email_map(
 ) -> dict[str, set[str]]:
     group_member_emails: dict[str, set[str]] = {}
     for user_result in confluence_client.paginated_cql_user_retrieval():
-        logger.debug(f"Processing groups for user: {user_result}")
-
         user = user_result.get("user", {})
         if not user:
             logger.warning(f"user result missing user field: {user_result}")
@@ -35,17 +33,10 @@ def _build_group_member_email_map(
             logger.warning(f"user result missing email field: {user_result}")
             continue
 
-        all_users_groups: set[str] = set()
         for group in confluence_client.paginated_groups_by_user_retrieval(user):
             # group name uniqueness is enforced by Confluence, so we can use it as a group ID
             group_id = group["name"]
             group_member_emails.setdefault(group_id, set()).add(email)
-            all_users_groups.add(group_id)
-
-        if not group_member_emails:
-            logger.warning(f"No groups found for user with email: {email}")
-        else:
-            logger.debug(f"Found groups {all_users_groups} for user with email {email}")
 
     return group_member_emails
 

backend/ee/onyx/external_permissions/gmail/doc_sync.py

@@ -6,7 +6,6 @@ from onyx.access.models import ExternalAccess
 from onyx.connectors.gmail.connector import GmailConnector
 from onyx.connectors.interfaces import GenerateSlimDocumentOutput
 from onyx.db.models import ConnectorCredentialPair
-from onyx.indexing.indexing_heartbeat import IndexingHeartbeatInterface
 from onyx.utils.logger import setup_logger
 
 logger = setup_logger()
@@ -29,7 +28,7 @@ def _get_slim_doc_generator(
 
 
 def gmail_doc_sync(
-    cc_pair: ConnectorCredentialPair, callback: IndexingHeartbeatInterface | None
+    cc_pair: ConnectorCredentialPair,
 ) -> list[DocExternalAccess]:
     """
     Adds the external permissions to the documents in postgres
@@ -45,12 +44,6 @@ def gmail_doc_sync(
     document_external_access: list[DocExternalAccess] = []
     for slim_doc_batch in slim_doc_generator:
         for slim_doc in slim_doc_batch:
-            if callback:
-                if callback.should_stop():
-                    raise RuntimeError("gmail_doc_sync: Stop signal detected")
-
-                callback.progress("gmail_doc_sync", 1)
-
             if slim_doc.perm_sync_data is None:
                 logger.warning(f"No permissions found for document {slim_doc.id}")
                 continue

backend/ee/onyx/external_permissions/google_drive/doc_sync.py

@@ -10,7 +10,6 @@ from onyx.connectors.google_utils.resources import get_drive_service
 from onyx.connectors.interfaces import GenerateSlimDocumentOutput
 from onyx.connectors.models import SlimDocument
 from onyx.db.models import ConnectorCredentialPair
-from onyx.indexing.indexing_heartbeat import IndexingHeartbeatInterface
 from onyx.utils.logger import setup_logger
 
 logger = setup_logger()
@@ -43,22 +42,24 @@ def _fetch_permissions_for_permission_ids(
     if not permission_info or not doc_id:
         return []
 
+    # Check cache first for all permission IDs
     permissions = [
         _PERMISSION_ID_PERMISSION_MAP[pid]
         for pid in permission_ids
         if pid in _PERMISSION_ID_PERMISSION_MAP
     ]
 
+    # If we found all permissions in cache, return them
     if len(permissions) == len(permission_ids):
         return permissions
 
     owner_email = permission_info.get("owner_email")
-
     drive_service = get_drive_service(
         creds=google_drive_connector.creds,
         user_email=(owner_email or google_drive_connector.primary_admin_email),
     )
 
+    # Otherwise, fetch all permissions and update cache
     fetched_permissions = execute_paginated_retrieval(
         retrieval_function=drive_service.permissions().list,
         list_key="permissions",
@@ -68,6 +69,7 @@ def _fetch_permissions_for_permission_ids(
     )
 
     permissions_for_doc_id = []
+    # Update cache and return all permissions
     for permission in fetched_permissions:
         permissions_for_doc_id.append(permission)
         _PERMISSION_ID_PERMISSION_MAP[permission["id"]] = permission
@@ -129,7 +131,7 @@ def _get_permissions_from_slim_doc(
 
 
 def gdrive_doc_sync(
-    cc_pair: ConnectorCredentialPair, callback: IndexingHeartbeatInterface | None
+    cc_pair: ConnectorCredentialPair,
 ) -> list[DocExternalAccess]:
     """
     Adds the external permissions to the documents in postgres
@@ -147,12 +149,6 @@ def gdrive_doc_sync(
     document_external_accesses = []
     for slim_doc_batch in slim_doc_generator:
         for slim_doc in slim_doc_batch:
-            if callback:
-                if callback.should_stop():
-                    raise RuntimeError("gdrive_doc_sync: Stop signal detected")
-
-                callback.progress("gdrive_doc_sync", 1)
-
             ext_access = _get_permissions_from_slim_doc(
                 google_drive_connector=google_drive_connector,
                 slim_doc=slim_doc,

backend/ee/onyx/external_permissions/slack/doc_sync.py

@@ -7,7 +7,6 @@ from onyx.connectors.slack.connector import get_channels
 from onyx.connectors.slack.connector import make_paginated_slack_api_call_w_retries
 from onyx.connectors.slack.connector import SlackPollConnector
 from onyx.db.models import ConnectorCredentialPair
-from onyx.indexing.indexing_heartbeat import IndexingHeartbeatInterface
 from onyx.utils.logger import setup_logger
 
 
@@ -15,7 +14,7 @@ logger = setup_logger()
 
 
 def _get_slack_document_ids_and_channels(
-    cc_pair: ConnectorCredentialPair, callback: IndexingHeartbeatInterface | None
+    cc_pair: ConnectorCredentialPair,
 ) -> dict[str, list[str]]:
     slack_connector = SlackPollConnector(**cc_pair.connector.connector_specific_config)
     slack_connector.load_credentials(cc_pair.credential.credential_json)
@@ -25,14 +24,6 @@ def _get_slack_document_ids_and_channels(
     channel_doc_map: dict[str, list[str]] = {}
     for doc_metadata_batch in slim_doc_generator:
         for doc_metadata in doc_metadata_batch:
-            if callback:
-                if callback.should_stop():
-                    raise RuntimeError(
-                        "_get_slack_document_ids_and_channels: Stop signal detected"
-                    )
-
-                callback.progress("_get_slack_document_ids_and_channels", 1)
-
             if doc_metadata.perm_sync_data is None:
                 continue
             channel_id = doc_metadata.perm_sync_data["channel_id"]
@@ -123,7 +114,7 @@ def _fetch_channel_permissions(
 
 
 def slack_doc_sync(
-    cc_pair: ConnectorCredentialPair, callback: IndexingHeartbeatInterface | None
+    cc_pair: ConnectorCredentialPair,
 ) -> list[DocExternalAccess]:
     """
     Adds the external permissions to the documents in postgres
@@ -136,7 +127,7 @@ def slack_doc_sync(
     )
     user_id_to_email_map = fetch_user_id_to_email_map(slack_client)
     channel_doc_map = _get_slack_document_ids_and_channels(
-        cc_pair=cc_pair, callback=callback
+        cc_pair=cc_pair,
     )
     workspace_permissions = _fetch_workspace_permissions(
         user_id_to_email_map=user_id_to_email_map,

backend/ee/onyx/external_permissions/sync_params.py

@@ -15,13 +15,11 @@ from ee.onyx.external_permissions.slack.doc_sync import slack_doc_sync
 from onyx.access.models import DocExternalAccess
 from onyx.configs.constants import DocumentSource
 from onyx.db.models import ConnectorCredentialPair
-from onyx.indexing.indexing_heartbeat import IndexingHeartbeatInterface
 
 # Defining the input/output types for the sync functions
 DocSyncFuncType = Callable[
     [
         ConnectorCredentialPair,
-        IndexingHeartbeatInterface | None,
     ],
     list[DocExternalAccess],
 ]

backend/ee/onyx/onyxbot/slack/handlers/handle_standard_answers.py

@@ -80,7 +80,7 @@ def oneoff_standard_answers(
 def _handle_standard_answers(
     message_info: SlackMessageInfo,
     receiver_ids: list[str] | None,
-    slack_channel_config: SlackChannelConfig,
+    slack_channel_config: SlackChannelConfig | None,
     prompt: Prompt | None,
     logger: OnyxLoggingAdapter,
     client: WebClient,
@@ -94,10 +94,13 @@ def _handle_standard_answers(
     Returns True if standard answers are found to match the user's message and therefore,
     we still need to respond to the users.
     """
+    # if no channel config, then no standard answers are configured
+    if not slack_channel_config:
+        return False
 
     slack_thread_id = message_info.thread_to_respond
     configured_standard_answer_categories = (
-        slack_channel_config.standard_answer_categories
+        slack_channel_config.standard_answer_categories if slack_channel_config else []
     )
     configured_standard_answers = set(
         [

backend/ee/onyx/server/middleware/tenant_tracking.py

@@ -10,7 +10,6 @@ from fastapi import Response
 from ee.onyx.auth.users import decode_anonymous_user_jwt_token
 from ee.onyx.configs.app_configs import ANONYMOUS_USER_COOKIE_NAME
 from onyx.auth.api_key import extract_tenant_from_api_key_header
-from onyx.configs.constants import TENANT_ID_COOKIE_NAME
 from onyx.db.engine import is_valid_schema_name
 from onyx.redis.redis_pool import retrieve_auth_token_data_from_redis
 from shared_configs.configs import MULTI_TENANT
@@ -44,7 +43,6 @@ async def _get_tenant_id_from_request(
     Attempt to extract tenant_id from:
     1) The API key header
     2) The Redis-based token (stored in Cookie: fastapiusersauth)
-    3)  Reset token cookie
     Fallback: POSTGRES_DEFAULT_SCHEMA
     """
     # Check for API key
@@ -87,18 +85,8 @@ async def _get_tenant_id_from_request(
         if not is_valid_schema_name(tenant_id):
             raise HTTPException(status_code=400, detail="Invalid tenant ID format")
 
+        return tenant_id
+
     except Exception as e:
         logger.error(f"Unexpected error in _get_tenant_id_from_request: {str(e)}")
         raise HTTPException(status_code=500, detail="Internal server error")
-
-    finally:
-        if tenant_id:
-            return tenant_id
-
-        # As a final step, check for explicit tenant_id cookie
-        tenant_id_cookie = request.cookies.get(TENANT_ID_COOKIE_NAME)
-        if tenant_id_cookie and is_valid_schema_name(tenant_id_cookie):
-            return tenant_id_cookie
-
-        # If we've reached this point, return the default schema
-        return POSTGRES_DEFAULT_SCHEMA

backend/ee/onyx/server/oauth.py

@@ -286,7 +286,6 @@ def prepare_authorization_request(
     oauth_state = (
         base64.urlsafe_b64encode(oauth_uuid.bytes).rstrip(b"=").decode("utf-8")
     )
-    session: str
 
     if connector == DocumentSource.SLACK:
         oauth_url = SlackOAuth.generate_oauth_url(oauth_state)
@@ -555,7 +554,6 @@ def handle_google_drive_oauth_callback(
         )
 
     session_json = session_json_bytes.decode("utf-8")
-    session: GoogleDriveOAuth.OAuthSession
     try:
         session = GoogleDriveOAuth.parse_session(session_json)
 

backend/ee/onyx/server/query_and_chat/chat_backend.py

@@ -179,7 +179,6 @@ def handle_simplified_chat_message(
         chunks_below=0,
         full_doc=chat_message_req.full_doc,
         structured_response_format=chat_message_req.structured_response_format,
-        use_agentic_search=chat_message_req.use_agentic_search,
     )
 
     packets = stream_chat_message_objects(
@@ -302,7 +301,6 @@ def handle_send_message_simple_with_history(
         chunks_below=0,
         full_doc=req.full_doc,
         structured_response_format=req.structured_response_format,
-        use_agentic_search=req.use_agentic_search,
     )
 
     packets = stream_chat_message_objects(

backend/ee/onyx/server/query_and_chat/models.py

@@ -57,9 +57,6 @@ class BasicCreateChatMessageRequest(ChunkContext):
     # https://platform.openai.com/docs/guides/structured-outputs/introduction
     structured_response_format: dict | None = None
 
-    # If True, uses agentic search instead of basic search
-    use_agentic_search: bool = False
-
 
 class BasicCreateChatMessageWithHistoryRequest(ChunkContext):
     # Last element is the new query. All previous elements are historical context
@@ -74,8 +71,6 @@ class BasicCreateChatMessageWithHistoryRequest(ChunkContext):
     # only works if using an OpenAI model. See the following for more details:
     # https://platform.openai.com/docs/guides/structured-outputs/introduction
     structured_response_format: dict | None = None
-    # If True, uses agentic search instead of basic search
-    use_agentic_search: bool = False
 
 
 class SimpleDoc(BaseModel):
@@ -125,12 +120,9 @@ class OneShotQARequest(ChunkContext):
     # will also disable Thread-based Rewording if specified
     query_override: str | None = None
 
-    # If True, skips generating an AI response to the search query
+    # If True, skips generative an AI response to the search query
     skip_gen_ai_answer_generation: bool = False
 
-    # If True, uses agentic search instead of basic search
-    use_agentic_search: bool = False
-
     @model_validator(mode="after")
     def check_persona_fields(self) -> "OneShotQARequest":
         if self.persona_override_config is None and self.persona_id is None:

backend/ee/onyx/server/query_and_chat/query_backend.py

@@ -196,8 +196,6 @@ def get_answer_stream(
         retrieval_details=query_request.retrieval_options,
         rerank_settings=query_request.rerank_settings,
         db_session=db_session,
-        use_agentic_search=query_request.use_agentic_search,
-        skip_gen_ai_answer_generation=query_request.skip_gen_ai_answer_generation,
     )
 
     packets = stream_chat_message_objects(

backend/ee/onyx/server/tenants/api.py

@@ -34,7 +34,6 @@ from onyx.auth.users import get_redis_strategy
 from onyx.auth.users import optional_user
 from onyx.auth.users import User
 from onyx.configs.app_configs import WEB_DOMAIN
-from onyx.configs.constants import FASTAPI_USERS_AUTH_COOKIE_NAME
 from onyx.db.auth import get_user_count
 from onyx.db.engine import get_current_tenant_id
 from onyx.db.engine import get_session
@@ -112,7 +111,6 @@ async def login_as_anonymous_user(
     token = generate_anonymous_user_jwt_token(tenant_id)
 
     response = Response()
-    response.delete_cookie(FASTAPI_USERS_AUTH_COOKIE_NAME)
     response.set_cookie(
         key=ANONYMOUS_USER_COOKIE_NAME,
         value=token,

backend/ee/onyx/server/user_group/models.py

@@ -58,7 +58,6 @@ class UserGroup(BaseModel):
                     credential=CredentialSnapshot.from_credential_db_model(
                         cc_pair_relationship.cc_pair.credential
                     ),
-                    access_type=cc_pair_relationship.cc_pair.access_type,
                 )
                 for cc_pair_relationship in user_group_model.cc_pair_relationships
                 if cc_pair_relationship.is_current

backend/onyx/agents/agent_search/basic/graph_builder.py

@@ -1,97 +0,0 @@
-from langgraph.graph import END
-from langgraph.graph import START
-from langgraph.graph import StateGraph
-
-from onyx.agents.agent_search.basic.states import BasicInput
-from onyx.agents.agent_search.basic.states import BasicOutput
-from onyx.agents.agent_search.basic.states import BasicState
-from onyx.agents.agent_search.orchestration.nodes.basic_use_tool_response import (
-    basic_use_tool_response,
-)
-from onyx.agents.agent_search.orchestration.nodes.llm_tool_choice import llm_tool_choice
-from onyx.agents.agent_search.orchestration.nodes.prepare_tool_input import (
-    prepare_tool_input,
-)
-from onyx.agents.agent_search.orchestration.nodes.tool_call import tool_call
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def basic_graph_builder() -> StateGraph:
-    graph = StateGraph(
-        state_schema=BasicState,
-        input=BasicInput,
-        output=BasicOutput,
-    )
-
-    ### Add nodes ###
-
-    graph.add_node(
-        node="prepare_tool_input",
-        action=prepare_tool_input,
-    )
-
-    graph.add_node(
-        node="llm_tool_choice",
-        action=llm_tool_choice,
-    )
-
-    graph.add_node(
-        node="tool_call",
-        action=tool_call,
-    )
-
-    graph.add_node(
-        node="basic_use_tool_response",
-        action=basic_use_tool_response,
-    )
-
-    ### Add edges ###
-
-    graph.add_edge(start_key=START, end_key="prepare_tool_input")
-
-    graph.add_edge(start_key="prepare_tool_input", end_key="llm_tool_choice")
-
-    graph.add_conditional_edges("llm_tool_choice", should_continue, ["tool_call", END])
-
-    graph.add_edge(
-        start_key="tool_call",
-        end_key="basic_use_tool_response",
-    )
-
-    graph.add_edge(
-        start_key="basic_use_tool_response",
-        end_key=END,
-    )
-
-    return graph
-
-
-def should_continue(state: BasicState) -> str:
-    return (
-        # If there are no tool calls, basic graph already streamed the answer
-        END
-        if state.tool_choice is None
-        else "tool_call"
-    )
-
-
-if __name__ == "__main__":
-    from onyx.db.engine import get_session_context_manager
-    from onyx.context.search.models import SearchRequest
-    from onyx.llm.factory import get_default_llms
-    from onyx.agents.agent_search.shared_graph_utils.utils import get_test_config
-
-    graph = basic_graph_builder()
-    compiled_graph = graph.compile()
-    input = BasicInput(_unused=True)
-    primary_llm, fast_llm = get_default_llms()
-    with get_session_context_manager() as db_session:
-        config, _ = get_test_config(
-            db_session=db_session,
-            primary_llm=primary_llm,
-            fast_llm=fast_llm,
-            search_request=SearchRequest(query="How does onyx use FastAPI?"),
-        )
-        compiled_graph.invoke(input, config={"metadata": {"config": config}})

backend/onyx/agents/agent_search/basic/states.py

@@ -1,35 +0,0 @@
-from typing import TypedDict
-
-from langchain_core.messages import AIMessageChunk
-from pydantic import BaseModel
-
-from onyx.agents.agent_search.orchestration.states import ToolCallUpdate
-from onyx.agents.agent_search.orchestration.states import ToolChoiceInput
-from onyx.agents.agent_search.orchestration.states import ToolChoiceUpdate
-
-# States contain values that change over the course of graph execution,
-# Config is for values that are set at the start and never change.
-# If you are using a value from the config and realize it needs to change,
-# you should add it to the state and use/update the version in the state.
-
-
-## Graph Input State
-class BasicInput(BaseModel):
-    # Langgraph needs a nonempty input, but we pass in all static
-    # data through a RunnableConfig.
-    _unused: bool = True
-
-
-## Graph Output State
-class BasicOutput(TypedDict):
-    tool_call_chunk: AIMessageChunk
-
-
-## Graph State
-class BasicState(
-    BasicInput,
-    ToolChoiceInput,
-    ToolCallUpdate,
-    ToolChoiceUpdate,
-):
-    pass

backend/onyx/agents/agent_search/basic/utils.py

@@ -1,64 +0,0 @@
-from collections.abc import Iterator
-from typing import cast
-
-from langchain_core.messages import AIMessageChunk
-from langchain_core.messages import BaseMessage
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.shared_graph_utils.utils import write_custom_event
-from onyx.chat.models import LlmDoc
-from onyx.chat.models import OnyxContext
-from onyx.chat.stream_processing.answer_response_handler import AnswerResponseHandler
-from onyx.chat.stream_processing.answer_response_handler import CitationResponseHandler
-from onyx.chat.stream_processing.answer_response_handler import (
-    PassThroughAnswerResponseHandler,
-)
-from onyx.chat.stream_processing.utils import map_document_id_order
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def process_llm_stream(
-    messages: Iterator[BaseMessage],
-    should_stream_answer: bool,
-    writer: StreamWriter,
-    final_search_results: list[LlmDoc] | None = None,
-    displayed_search_results: list[OnyxContext] | list[LlmDoc] | None = None,
-) -> AIMessageChunk:
-    tool_call_chunk = AIMessageChunk(content="")
-
-    if final_search_results and displayed_search_results:
-        answer_handler: AnswerResponseHandler = CitationResponseHandler(
-            context_docs=final_search_results,
-            final_doc_id_to_rank_map=map_document_id_order(final_search_results),
-            display_doc_id_to_rank_map=map_document_id_order(displayed_search_results),
-        )
-    else:
-        answer_handler = PassThroughAnswerResponseHandler()
-
-    full_answer = ""
-    # This stream will be the llm answer if no tool is chosen. When a tool is chosen,
-    # the stream will contain AIMessageChunks with tool call information.
-    for message in messages:
-        answer_piece = message.content
-        if not isinstance(answer_piece, str):
-            # this is only used for logging, so fine to
-            # just add the string representation
-            answer_piece = str(answer_piece)
-        full_answer += answer_piece
-
-        if isinstance(message, AIMessageChunk) and (
-            message.tool_call_chunks or message.tool_calls
-        ):
-            tool_call_chunk += message  # type: ignore
-        elif should_stream_answer:
-            for response_part in answer_handler.handle_response_part(message, []):
-                write_custom_event(
-                    "basic_response",
-                    response_part,
-                    writer,
-                )
-
-    logger.debug(f"Full answer: {full_answer}")
-    return cast(AIMessageChunk, tool_call_chunk)

backend/onyx/agents/agent_search/core_state.py

@@ -1,21 +0,0 @@
-from operator import add
-from typing import Annotated
-
-from pydantic import BaseModel
-
-
-class CoreState(BaseModel):
-    """
-    This is the core state that is shared across all subgraphs.
-    """
-
-    base_question: str = ""
-    log_messages: Annotated[list[str], add] = []
-
-
-class SubgraphCoreState(BaseModel):
-    """
-    This is the core state that is shared across all subgraphs.
-    """
-
-    log_messages: Annotated[list[str], add]

backend/onyx/agents/agent_search/deep_search/initial/generate_individual_sub_answer/edges.py

@@ -1,31 +0,0 @@
-from collections.abc import Hashable
-from datetime import datetime
-
-from langgraph.types import Send
-
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    SubQuestionAnsweringInput,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalInput,
-)
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def send_to_expanded_retrieval(state: SubQuestionAnsweringInput) -> Send | Hashable:
-    """
-    LangGraph edge to send a sub-question to the expanded retrieval.
-    """
-    edge_start_time = datetime.now()
-
-    return Send(
-        "initial_sub_question_expanded_retrieval",
-        ExpandedRetrievalInput(
-            question=state.question,
-            base_search=False,
-            sub_question_id=state.question_id,
-            log_messages=[f"{edge_start_time} -- Sending to expanded retrieval"],
-        ),
-    )

backend/onyx/agents/agent_search/deep_search/initial/generate_individual_sub_answer/graph_builder.py

@@ -1,137 +0,0 @@
-from langgraph.graph import END
-from langgraph.graph import START
-from langgraph.graph import StateGraph
-
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.edges import (
-    send_to_expanded_retrieval,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.nodes.check_sub_answer import (
-    check_sub_answer,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.nodes.format_sub_answer import (
-    format_sub_answer,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.nodes.generate_sub_answer import (
-    generate_sub_answer,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.nodes.ingest_retrieved_documents import (
-    ingest_retrieved_documents,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    AnswerQuestionOutput,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    AnswerQuestionState,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    SubQuestionAnsweringInput,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.graph_builder import (
-    expanded_retrieval_graph_builder,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import get_test_config
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def answer_query_graph_builder() -> StateGraph:
-    """
-    LangGraph sub-graph builder for the initial individual sub-answer generation.
-    """
-    graph = StateGraph(
-        state_schema=AnswerQuestionState,
-        input=SubQuestionAnsweringInput,
-        output=AnswerQuestionOutput,
-    )
-
-    ### Add nodes ###
-
-    # The sub-graph that executes the expanded retrieval process for a sub-question
-    expanded_retrieval = expanded_retrieval_graph_builder().compile()
-    graph.add_node(
-        node="initial_sub_question_expanded_retrieval",
-        action=expanded_retrieval,
-    )
-
-    # The node that ingests the retrieved documents and puts them into the proper
-    # state keys.
-    graph.add_node(
-        node="ingest_retrieval",
-        action=ingest_retrieved_documents,
-    )
-
-    # The node that generates the sub-answer
-    graph.add_node(
-        node="generate_sub_answer",
-        action=generate_sub_answer,
-    )
-
-    # The node that checks the sub-answer
-    graph.add_node(
-        node="answer_check",
-        action=check_sub_answer,
-    )
-
-    # The node that formats the sub-answer for the following initial answer generation
-    graph.add_node(
-        node="format_answer",
-        action=format_sub_answer,
-    )
-
-    ### Add edges ###
-
-    graph.add_conditional_edges(
-        source=START,
-        path=send_to_expanded_retrieval,
-        path_map=["initial_sub_question_expanded_retrieval"],
-    )
-    graph.add_edge(
-        start_key="initial_sub_question_expanded_retrieval",
-        end_key="ingest_retrieval",
-    )
-    graph.add_edge(
-        start_key="ingest_retrieval",
-        end_key="generate_sub_answer",
-    )
-    graph.add_edge(
-        start_key="generate_sub_answer",
-        end_key="answer_check",
-    )
-    graph.add_edge(
-        start_key="answer_check",
-        end_key="format_answer",
-    )
-    graph.add_edge(
-        start_key="format_answer",
-        end_key=END,
-    )
-
-    return graph
-
-
-if __name__ == "__main__":
-    from onyx.db.engine import get_session_context_manager
-    from onyx.llm.factory import get_default_llms
-    from onyx.context.search.models import SearchRequest
-
-    graph = answer_query_graph_builder()
-    compiled_graph = graph.compile()
-    primary_llm, fast_llm = get_default_llms()
-    search_request = SearchRequest(
-        query="what can you do with onyx or danswer?",
-    )
-    with get_session_context_manager() as db_session:
-        graph_config, search_tool = get_test_config(
-            db_session, primary_llm, fast_llm, search_request
-        )
-        inputs = SubQuestionAnsweringInput(
-            question="what can you do with onyx?",
-            question_id="0_0",
-            log_messages=[],
-        )
-        for thing in compiled_graph.stream(
-            input=inputs,
-            config={"configurable": {"config": graph_config}},
-        ):
-            logger.debug(thing)

backend/onyx/agents/agent_search/deep_search/initial/generate_individual_sub_answer/nodes/check_sub_answer.py

@@ -1,75 +0,0 @@
-from datetime import datetime
-from typing import cast
-
-from langchain_core.messages import HumanMessage
-from langchain_core.messages import merge_message_runs
-from langchain_core.runnables.config import RunnableConfig
-
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    AnswerQuestionState,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    SubQuestionAnswerCheckUpdate,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import parse_question_id
-from onyx.prompts.agent_search import SUB_ANSWER_CHECK_PROMPT
-from onyx.prompts.agent_search import UNKNOWN_ANSWER
-
-
-def check_sub_answer(
-    state: AnswerQuestionState, config: RunnableConfig
-) -> SubQuestionAnswerCheckUpdate:
-    """
-    LangGraph node to check the quality of the sub-answer. The answer
-    is represented as a boolean value.
-    """
-    node_start_time = datetime.now()
-
-    level, question_num = parse_question_id(state.question_id)
-    if state.answer == UNKNOWN_ANSWER:
-        return SubQuestionAnswerCheckUpdate(
-            answer_quality=False,
-            log_messages=[
-                get_langgraph_node_log_string(
-                    graph_component="initial  - generate individual sub answer",
-                    node_name="check sub answer",
-                    node_start_time=node_start_time,
-                    result="unknown answer",
-                )
-            ],
-        )
-    msg = [
-        HumanMessage(
-            content=SUB_ANSWER_CHECK_PROMPT.format(
-                question=state.question,
-                base_answer=state.answer,
-            )
-        )
-    ]
-
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    fast_llm = graph_config.tooling.fast_llm
-    response = list(
-        fast_llm.stream(
-            prompt=msg,
-        )
-    )
-
-    quality_str: str = merge_message_runs(response, chunk_separator="")[0].content
-    answer_quality = "yes" in quality_str.lower()
-
-    return SubQuestionAnswerCheckUpdate(
-        answer_quality=answer_quality,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="initial  - generate individual sub answer",
-                node_name="check sub answer",
-                node_start_time=node_start_time,
-                result=f"Answer quality: {quality_str}",
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/initial/generate_individual_sub_answer/nodes/format_sub_answer.py

@@ -1,30 +0,0 @@
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    AnswerQuestionOutput,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    AnswerQuestionState,
-)
-from onyx.agents.agent_search.shared_graph_utils.models import (
-    SubQuestionAnswerResults,
-)
-
-
-def format_sub_answer(state: AnswerQuestionState) -> AnswerQuestionOutput:
-    """
-    LangGraph node to generate the sub-answer format.
-    """
-    return AnswerQuestionOutput(
-        answer_results=[
-            SubQuestionAnswerResults(
-                question=state.question,
-                question_id=state.question_id,
-                verified_high_quality=state.answer_quality,
-                answer=state.answer,
-                sub_query_retrieval_results=state.expanded_retrieval_results,
-                verified_reranked_documents=state.verified_reranked_documents,
-                context_documents=state.context_documents,
-                cited_documents=state.cited_documents,
-                sub_question_retrieval_stats=state.sub_question_retrieval_stats,
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/initial/generate_individual_sub_answer/nodes/generate_sub_answer.py

@@ -1,137 +0,0 @@
-from datetime import datetime
-from typing import Any
-from typing import cast
-
-from langchain_core.messages import merge_message_runs
-from langchain_core.runnables.config import RunnableConfig
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    AnswerQuestionState,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    SubQuestionAnswerGenerationUpdate,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.agent_prompt_ops import (
-    build_sub_question_answer_prompt,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import get_answer_citation_ids
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_persona_agent_prompt_expressions,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import parse_question_id
-from onyx.agents.agent_search.shared_graph_utils.utils import write_custom_event
-from onyx.chat.models import AgentAnswerPiece
-from onyx.chat.models import StreamStopInfo
-from onyx.chat.models import StreamStopReason
-from onyx.chat.models import StreamType
-from onyx.configs.agent_configs import AGENT_MAX_ANSWER_CONTEXT_DOCS
-from onyx.prompts.agent_search import NO_RECOVERED_DOCS
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def generate_sub_answer(
-    state: AnswerQuestionState,
-    config: RunnableConfig,
-    writer: StreamWriter = lambda _: None,
-) -> SubQuestionAnswerGenerationUpdate:
-    """
-    LangGraph node to generate a sub-answer.
-    """
-    node_start_time = datetime.now()
-
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    question = state.question
-    state.verified_reranked_documents
-    level, question_num = parse_question_id(state.question_id)
-    context_docs = state.context_documents[:AGENT_MAX_ANSWER_CONTEXT_DOCS]
-    persona_contextualized_prompt = get_persona_agent_prompt_expressions(
-        graph_config.inputs.search_request.persona
-    ).contextualized_prompt
-
-    if len(context_docs) == 0:
-        answer_str = NO_RECOVERED_DOCS
-        write_custom_event(
-            "sub_answers",
-            AgentAnswerPiece(
-                answer_piece=answer_str,
-                level=level,
-                level_question_num=question_num,
-                answer_type="agent_sub_answer",
-            ),
-            writer,
-        )
-    else:
-        fast_llm = graph_config.tooling.fast_llm
-        msg = build_sub_question_answer_prompt(
-            question=question,
-            original_question=graph_config.inputs.search_request.query,
-            docs=context_docs,
-            persona_specification=persona_contextualized_prompt,
-            config=fast_llm.config,
-        )
-
-        response: list[str | list[str | dict[str, Any]]] = []
-        dispatch_timings: list[float] = []
-        for message in fast_llm.stream(
-            prompt=msg,
-        ):
-            # TODO: in principle, the answer here COULD contain images, but we don't support that yet
-            content = message.content
-            if not isinstance(content, str):
-                raise ValueError(
-                    f"Expected content to be a string, but got {type(content)}"
-                )
-            start_stream_token = datetime.now()
-            write_custom_event(
-                "sub_answers",
-                AgentAnswerPiece(
-                    answer_piece=content,
-                    level=level,
-                    level_question_num=question_num,
-                    answer_type="agent_sub_answer",
-                ),
-                writer,
-            )
-            end_stream_token = datetime.now()
-            dispatch_timings.append(
-                (end_stream_token - start_stream_token).microseconds
-            )
-            response.append(content)
-
-        answer_str = merge_message_runs(response, chunk_separator="")[0].content
-        logger.debug(
-            f"Average dispatch time: {sum(dispatch_timings) / len(dispatch_timings)}"
-        )
-
-    answer_citation_ids = get_answer_citation_ids(answer_str)
-    cited_documents = [
-        context_docs[id] for id in answer_citation_ids if id < len(context_docs)
-    ]
-
-    stop_event = StreamStopInfo(
-        stop_reason=StreamStopReason.FINISHED,
-        stream_type=StreamType.SUB_ANSWER,
-        level=level,
-        level_question_num=question_num,
-    )
-    write_custom_event("stream_finished", stop_event, writer)
-
-    return SubQuestionAnswerGenerationUpdate(
-        answer=answer_str,
-        cited_documents=cited_documents,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="initial - generate individual sub answer",
-                node_name="generate sub answer",
-                node_start_time=node_start_time,
-                result="",
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/initial/generate_individual_sub_answer/nodes/ingest_retrieved_documents.py

@@ -1,25 +0,0 @@
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    SubQuestionRetrievalIngestionUpdate,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalOutput,
-)
-from onyx.agents.agent_search.shared_graph_utils.models import AgentChunkRetrievalStats
-
-
-def ingest_retrieved_documents(
-    state: ExpandedRetrievalOutput,
-) -> SubQuestionRetrievalIngestionUpdate:
-    """
-    LangGraph node to ingest the retrieved documents to format it for the sub-answer.
-    """
-    sub_question_retrieval_stats = state.expanded_retrieval_result.retrieval_stats
-    if sub_question_retrieval_stats is None:
-        sub_question_retrieval_stats = [AgentChunkRetrievalStats()]
-
-    return SubQuestionRetrievalIngestionUpdate(
-        expanded_retrieval_results=state.expanded_retrieval_result.expanded_query_results,
-        verified_reranked_documents=state.expanded_retrieval_result.verified_reranked_documents,
-        context_documents=state.expanded_retrieval_result.context_documents,
-        sub_question_retrieval_stats=sub_question_retrieval_stats,
-    )

backend/onyx/agents/agent_search/deep_search/initial/generate_individual_sub_answer/states.py

@@ -1,75 +0,0 @@
-from operator import add
-from typing import Annotated
-
-from pydantic import BaseModel
-
-from onyx.agents.agent_search.core_state import SubgraphCoreState
-from onyx.agents.agent_search.deep_search.main.states import LoggerUpdate
-from onyx.agents.agent_search.shared_graph_utils.models import AgentChunkRetrievalStats
-from onyx.agents.agent_search.shared_graph_utils.models import QueryRetrievalResult
-from onyx.agents.agent_search.shared_graph_utils.models import (
-    SubQuestionAnswerResults,
-)
-from onyx.agents.agent_search.shared_graph_utils.operators import (
-    dedup_inference_sections,
-)
-from onyx.context.search.models import InferenceSection
-
-
-## Update States
-class SubQuestionAnswerCheckUpdate(LoggerUpdate, BaseModel):
-    answer_quality: bool = False
-    log_messages: list[str] = []
-
-
-class SubQuestionAnswerGenerationUpdate(LoggerUpdate, BaseModel):
-    answer: str = ""
-    log_messages: list[str] = []
-    cited_documents: Annotated[list[InferenceSection], dedup_inference_sections] = []
-    # answer_stat: AnswerStats
-
-
-class SubQuestionRetrievalIngestionUpdate(LoggerUpdate, BaseModel):
-    expanded_retrieval_results: list[QueryRetrievalResult] = []
-    verified_reranked_documents: Annotated[
-        list[InferenceSection], dedup_inference_sections
-    ] = []
-    context_documents: Annotated[list[InferenceSection], dedup_inference_sections] = []
-    sub_question_retrieval_stats: AgentChunkRetrievalStats = AgentChunkRetrievalStats()
-
-
-## Graph Input State
-
-
-class SubQuestionAnsweringInput(SubgraphCoreState):
-    question: str = ""
-    question_id: str = (
-        ""  # 0_0 is original question, everything else is <level>_<question_num>.
-    )
-    # level 0 is original question and first decomposition, level 1 is follow up, etc
-    # question_num is a unique number per original question per level.
-
-
-## Graph State
-
-
-class AnswerQuestionState(
-    SubQuestionAnsweringInput,
-    SubQuestionAnswerGenerationUpdate,
-    SubQuestionAnswerCheckUpdate,
-    SubQuestionRetrievalIngestionUpdate,
-):
-    pass
-
-
-## Graph Output State
-
-
-class AnswerQuestionOutput(LoggerUpdate, BaseModel):
-    """
-    This is a list of results even though each call of this subgraph only returns one result.
-    This is because if we parallelize the answer query subgraph, there will be multiple
-      results in a list so the add operator is used to add them together.
-    """
-
-    answer_results: Annotated[list[SubQuestionAnswerResults], add] = []

backend/onyx/agents/agent_search/deep_search/initial/generate_initial_answer/edges.py

@@ -1,50 +0,0 @@
-from collections.abc import Hashable
-from datetime import datetime
-
-from langgraph.types import Send
-
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    AnswerQuestionOutput,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    SubQuestionAnsweringInput,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_initial_answer.states import (
-    SubQuestionRetrievalState,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import make_question_id
-
-
-def parallelize_initial_sub_question_answering(
-    state: SubQuestionRetrievalState,
-) -> list[Send | Hashable]:
-    """
-    LangGraph edge to parallelize the initial sub-question answering. If there are no sub-questions,
-    we send empty answers to the initial answer generation, and that answer would be generated
-    solely based on the documents retrieved for the original question.
-    """
-    edge_start_time = datetime.now()
-    if len(state.initial_sub_questions) > 0:
-        return [
-            Send(
-                "answer_query_subgraph",
-                SubQuestionAnsweringInput(
-                    question=question,
-                    question_id=make_question_id(0, question_num + 1),
-                    log_messages=[
-                        f"{edge_start_time} -- Main Edge - Parallelize Initial Sub-question Answering"
-                    ],
-                ),
-            )
-            for question_num, question in enumerate(state.initial_sub_questions)
-        ]
-
-    else:
-        return [
-            Send(
-                "ingest_answers",
-                AnswerQuestionOutput(
-                    answer_results=[],
-                ),
-            )
-        ]

backend/onyx/agents/agent_search/deep_search/initial/generate_initial_answer/graph_builder.py

@@ -1,96 +0,0 @@
-from langgraph.graph import END
-from langgraph.graph import START
-from langgraph.graph import StateGraph
-
-from onyx.agents.agent_search.deep_search.initial.generate_initial_answer.nodes.generate_initial_answer import (
-    generate_initial_answer,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_initial_answer.nodes.validate_initial_answer import (
-    validate_initial_answer,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_initial_answer.states import (
-    SubQuestionRetrievalInput,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_initial_answer.states import (
-    SubQuestionRetrievalState,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_sub_answers.graph_builder import (
-    generate_sub_answers_graph_builder,
-)
-from onyx.agents.agent_search.deep_search.initial.retrieve_orig_question_docs.graph_builder import (
-    retrieve_orig_question_docs_graph_builder,
-)
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def generate_initial_answer_graph_builder(test_mode: bool = False) -> StateGraph:
-    """
-    LangGraph graph builder for the initial answer generation.
-    """
-    graph = StateGraph(
-        state_schema=SubQuestionRetrievalState,
-        input=SubQuestionRetrievalInput,
-    )
-
-    # The sub-graph that generates the initial sub-answers
-    generate_sub_answers = generate_sub_answers_graph_builder().compile()
-    graph.add_node(
-        node="generate_sub_answers_subgraph",
-        action=generate_sub_answers,
-    )
-
-    # The sub-graph that retrieves the original question documents. This is run
-    # in parallel with the sub-answer generation process
-    retrieve_orig_question_docs = retrieve_orig_question_docs_graph_builder().compile()
-    graph.add_node(
-        node="retrieve_orig_question_docs_subgraph_wrapper",
-        action=retrieve_orig_question_docs,
-    )
-
-    # Node that generates the initial answer using the results of the previous
-    # two sub-graphs
-    graph.add_node(
-        node="generate_initial_answer",
-        action=generate_initial_answer,
-    )
-
-    # Node that validates the initial answer
-    graph.add_node(
-        node="validate_initial_answer",
-        action=validate_initial_answer,
-    )
-
-    ### Add edges ###
-
-    graph.add_edge(
-        start_key=START,
-        end_key="retrieve_orig_question_docs_subgraph_wrapper",
-    )
-
-    graph.add_edge(
-        start_key=START,
-        end_key="generate_sub_answers_subgraph",
-    )
-
-    # Wait for both, the original question docs and the sub-answers to be generated before proceeding
-    graph.add_edge(
-        start_key=[
-            "retrieve_orig_question_docs_subgraph_wrapper",
-            "generate_sub_answers_subgraph",
-        ],
-        end_key="generate_initial_answer",
-    )
-
-    graph.add_edge(
-        start_key="generate_initial_answer",
-        end_key="validate_initial_answer",
-    )
-
-    graph.add_edge(
-        start_key="validate_initial_answer",
-        end_key=END,
-    )
-
-    return graph

backend/onyx/agents/agent_search/deep_search/initial/generate_initial_answer/nodes/generate_initial_answer.py

@@ -1,313 +0,0 @@
-from datetime import datetime
-from typing import Any
-from typing import cast
-
-from langchain_core.messages import HumanMessage
-from langchain_core.messages import merge_content
-from langchain_core.runnables import RunnableConfig
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.deep_search.initial.generate_initial_answer.states import (
-    SubQuestionRetrievalState,
-)
-from onyx.agents.agent_search.deep_search.main.models import AgentBaseMetrics
-from onyx.agents.agent_search.deep_search.main.operations import (
-    calculate_initial_agent_stats,
-)
-from onyx.agents.agent_search.deep_search.main.operations import get_query_info
-from onyx.agents.agent_search.deep_search.main.operations import logger
-from onyx.agents.agent_search.deep_search.main.states import (
-    InitialAnswerUpdate,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.agent_prompt_ops import (
-    get_prompt_enrichment_components,
-)
-from onyx.agents.agent_search.shared_graph_utils.agent_prompt_ops import (
-    trim_prompt_piece,
-)
-from onyx.agents.agent_search.shared_graph_utils.models import InitialAgentResultStats
-from onyx.agents.agent_search.shared_graph_utils.operators import (
-    dedup_inference_sections,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    dispatch_main_answer_stop_info,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import format_docs
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import relevance_from_docs
-from onyx.agents.agent_search.shared_graph_utils.utils import remove_document_citations
-from onyx.agents.agent_search.shared_graph_utils.utils import write_custom_event
-from onyx.chat.models import AgentAnswerPiece
-from onyx.chat.models import ExtendedToolResponse
-from onyx.configs.agent_configs import AGENT_MAX_ANSWER_CONTEXT_DOCS
-from onyx.configs.agent_configs import AGENT_MIN_ORIG_QUESTION_DOCS
-from onyx.context.search.models import InferenceSection
-from onyx.prompts.agent_search import (
-    INITIAL_ANSWER_PROMPT_W_SUB_QUESTIONS,
-)
-from onyx.prompts.agent_search import (
-    INITIAL_ANSWER_PROMPT_WO_SUB_QUESTIONS,
-)
-from onyx.prompts.agent_search import (
-    SUB_QUESTION_ANSWER_TEMPLATE,
-)
-from onyx.prompts.agent_search import UNKNOWN_ANSWER
-from onyx.tools.tool_implementations.search.search_tool import yield_search_responses
-
-
-def generate_initial_answer(
-    state: SubQuestionRetrievalState,
-    config: RunnableConfig,
-    writer: StreamWriter = lambda _: None,
-) -> InitialAnswerUpdate:
-    """
-    LangGraph node to generate the initial answer, using the initial sub-questions/sub-answers and the
-    documents retrieved for the original question.
-    """
-    node_start_time = datetime.now()
-
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    question = graph_config.inputs.search_request.query
-    prompt_enrichment_components = get_prompt_enrichment_components(graph_config)
-
-    sub_questions_cited_documents = state.cited_documents
-    orig_question_retrieval_documents = state.orig_question_retrieved_documents
-
-    consolidated_context_docs: list[InferenceSection] = sub_questions_cited_documents
-    counter = 0
-    for original_doc_number, original_doc in enumerate(
-        orig_question_retrieval_documents
-    ):
-        if original_doc_number not in sub_questions_cited_documents:
-            if (
-                counter <= AGENT_MIN_ORIG_QUESTION_DOCS
-                or len(consolidated_context_docs) < AGENT_MAX_ANSWER_CONTEXT_DOCS
-            ):
-                consolidated_context_docs.append(original_doc)
-                counter += 1
-
-    # sort docs by their scores - though the scores refer to different questions
-    relevant_docs = dedup_inference_sections(
-        consolidated_context_docs, consolidated_context_docs
-    )
-
-    sub_questions: list[str] = []
-    streamed_documents = (
-        relevant_docs
-        if len(relevant_docs) > 0
-        else state.orig_question_retrieved_documents[:15]
-    )
-
-    # Use the query info from the base document retrieval
-    query_info = get_query_info(state.orig_question_sub_query_retrieval_results)
-
-    assert (
-        graph_config.tooling.search_tool
-    ), "search_tool must be provided for agentic search"
-
-    relevance_list = relevance_from_docs(relevant_docs)
-    for tool_response in yield_search_responses(
-        query=question,
-        reranked_sections=streamed_documents,
-        final_context_sections=streamed_documents,
-        search_query_info=query_info,
-        get_section_relevance=lambda: relevance_list,
-        search_tool=graph_config.tooling.search_tool,
-    ):
-        write_custom_event(
-            "tool_response",
-            ExtendedToolResponse(
-                id=tool_response.id,
-                response=tool_response.response,
-                level=0,
-                level_question_num=0,  # 0, 0 is the base question
-            ),
-            writer,
-        )
-
-    if len(relevant_docs) == 0:
-        write_custom_event(
-            "initial_agent_answer",
-            AgentAnswerPiece(
-                answer_piece=UNKNOWN_ANSWER,
-                level=0,
-                level_question_num=0,
-                answer_type="agent_level_answer",
-            ),
-            writer,
-        )
-        dispatch_main_answer_stop_info(0, writer)
-
-        answer = UNKNOWN_ANSWER
-        initial_agent_stats = InitialAgentResultStats(
-            sub_questions={},
-            original_question={},
-            agent_effectiveness={},
-        )
-
-    else:
-        sub_question_answer_results = state.sub_question_results
-
-        # Collect the sub-questions and sub-answers and construct an appropriate
-        # prompt string.
-        # Consider replacing by a function.
-        answered_sub_questions: list[str] = []
-        all_sub_questions: list[str] = []  # Separate list for tracking all questions
-
-        for idx, sub_question_answer_result in enumerate(
-            sub_question_answer_results, start=1
-        ):
-            all_sub_questions.append(sub_question_answer_result.question)
-
-            is_valid_answer = (
-                sub_question_answer_result.verified_high_quality
-                and sub_question_answer_result.answer
-                and sub_question_answer_result.answer != UNKNOWN_ANSWER
-            )
-
-            if is_valid_answer:
-                answered_sub_questions.append(
-                    SUB_QUESTION_ANSWER_TEMPLATE.format(
-                        sub_question=sub_question_answer_result.question,
-                        sub_answer=sub_question_answer_result.answer,
-                        sub_question_num=idx,
-                    )
-                )
-
-        sub_question_answer_str = (
-            "\n\n------\n\n".join(answered_sub_questions)
-            if answered_sub_questions
-            else ""
-        )
-
-        # Use the appropriate prompt based on whether there are sub-questions.
-        base_prompt = (
-            INITIAL_ANSWER_PROMPT_W_SUB_QUESTIONS
-            if answered_sub_questions
-            else INITIAL_ANSWER_PROMPT_WO_SUB_QUESTIONS
-        )
-
-        sub_questions = all_sub_questions  # Replace the original assignment
-
-        model = graph_config.tooling.fast_llm
-
-        doc_context = format_docs(relevant_docs)
-        doc_context = trim_prompt_piece(
-            config=model.config,
-            prompt_piece=doc_context,
-            reserved_str=(
-                base_prompt
-                + sub_question_answer_str
-                + prompt_enrichment_components.persona_prompts.contextualized_prompt
-                + prompt_enrichment_components.history
-                + prompt_enrichment_components.date_str
-            ),
-        )
-
-        msg = [
-            HumanMessage(
-                content=base_prompt.format(
-                    question=question,
-                    answered_sub_questions=remove_document_citations(
-                        sub_question_answer_str
-                    ),
-                    relevant_docs=doc_context,
-                    persona_specification=prompt_enrichment_components.persona_prompts.contextualized_prompt,
-                    history=prompt_enrichment_components.history,
-                    date_prompt=prompt_enrichment_components.date_str,
-                )
-            )
-        ]
-
-        streamed_tokens: list[str | list[str | dict[str, Any]]] = [""]
-        dispatch_timings: list[float] = []
-        for message in model.stream(msg):
-            # TODO: in principle, the answer here COULD contain images, but we don't support that yet
-            content = message.content
-            if not isinstance(content, str):
-                raise ValueError(
-                    f"Expected content to be a string, but got {type(content)}"
-                )
-            start_stream_token = datetime.now()
-
-            write_custom_event(
-                "initial_agent_answer",
-                AgentAnswerPiece(
-                    answer_piece=content,
-                    level=0,
-                    level_question_num=0,
-                    answer_type="agent_level_answer",
-                ),
-                writer,
-            )
-            end_stream_token = datetime.now()
-            dispatch_timings.append(
-                (end_stream_token - start_stream_token).microseconds
-            )
-            streamed_tokens.append(content)
-
-        logger.debug(
-            f"Average dispatch time for initial answer: {sum(dispatch_timings) / len(dispatch_timings)}"
-        )
-
-        dispatch_main_answer_stop_info(0, writer)
-        response = merge_content(*streamed_tokens)
-        answer = cast(str, response)
-
-        initial_agent_stats = calculate_initial_agent_stats(
-            state.sub_question_results, state.orig_question_retrieval_stats
-        )
-
-        logger.debug(
-            f"\n\nYYYYY--Sub-Questions:\n\n{sub_question_answer_str}\n\nStats:\n\n"
-        )
-
-        if initial_agent_stats:
-            logger.debug(initial_agent_stats.original_question)
-            logger.debug(initial_agent_stats.sub_questions)
-            logger.debug(initial_agent_stats.agent_effectiveness)
-
-    agent_base_end_time = datetime.now()
-
-    if agent_base_end_time and state.agent_start_time:
-        duration_s = (agent_base_end_time - state.agent_start_time).total_seconds()
-    else:
-        duration_s = None
-
-    agent_base_metrics = AgentBaseMetrics(
-        num_verified_documents_total=len(relevant_docs),
-        num_verified_documents_core=state.orig_question_retrieval_stats.verified_count,
-        verified_avg_score_core=state.orig_question_retrieval_stats.verified_avg_scores,
-        num_verified_documents_base=initial_agent_stats.sub_questions.get(
-            "num_verified_documents"
-        ),
-        verified_avg_score_base=initial_agent_stats.sub_questions.get(
-            "verified_avg_score"
-        ),
-        base_doc_boost_factor=initial_agent_stats.agent_effectiveness.get(
-            "utilized_chunk_ratio"
-        ),
-        support_boost_factor=initial_agent_stats.agent_effectiveness.get(
-            "support_ratio"
-        ),
-        duration_s=duration_s,
-    )
-
-    return InitialAnswerUpdate(
-        initial_answer=answer,
-        initial_agent_stats=initial_agent_stats,
-        generated_sub_questions=sub_questions,
-        agent_base_end_time=agent_base_end_time,
-        agent_base_metrics=agent_base_metrics,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="initial - generate initial answer",
-                node_name="generate initial answer",
-                node_start_time=node_start_time,
-                result="",
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/initial/generate_initial_answer/nodes/validate_initial_answer.py

@@ -1,40 +0,0 @@
-from datetime import datetime
-
-from onyx.agents.agent_search.deep_search.initial.generate_initial_answer.states import (
-    SubQuestionRetrievalState,
-)
-from onyx.agents.agent_search.deep_search.main.operations import logger
-from onyx.agents.agent_search.deep_search.main.states import (
-    InitialAnswerQualityUpdate,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-
-
-def validate_initial_answer(
-    state: SubQuestionRetrievalState,
-) -> InitialAnswerQualityUpdate:
-    """
-    Check whether the initial answer sufficiently addresses the original user question.
-    """
-
-    node_start_time = datetime.now()
-
-    logger.debug(
-        f"--------{node_start_time}--------Checking for base answer validity - for not set True/False manually"
-    )
-
-    verdict = True
-
-    return InitialAnswerQualityUpdate(
-        initial_answer_quality_eval=verdict,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="initial - generate initial answer",
-                node_name="validate initial answer",
-                node_start_time=node_start_time,
-                result="",
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/initial/generate_initial_answer/states.py

@@ -1,51 +0,0 @@
-from operator import add
-from typing import Annotated
-from typing import TypedDict
-
-from onyx.agents.agent_search.core_state import CoreState
-from onyx.agents.agent_search.deep_search.main.states import (
-    ExploratorySearchUpdate,
-)
-from onyx.agents.agent_search.deep_search.main.states import (
-    InitialAnswerQualityUpdate,
-)
-from onyx.agents.agent_search.deep_search.main.states import (
-    InitialAnswerUpdate,
-)
-from onyx.agents.agent_search.deep_search.main.states import (
-    InitialQuestionDecompositionUpdate,
-)
-from onyx.agents.agent_search.deep_search.main.states import (
-    OrigQuestionRetrievalUpdate,
-)
-from onyx.agents.agent_search.deep_search.main.states import (
-    SubQuestionResultsUpdate,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.models import (
-    QuestionRetrievalResult,
-)
-from onyx.context.search.models import InferenceSection
-
-
-### States ###
-class SubQuestionRetrievalInput(CoreState):
-    exploratory_search_results: list[InferenceSection]
-
-
-## Graph State
-class SubQuestionRetrievalState(
-    # This includes the core state
-    SubQuestionRetrievalInput,
-    InitialQuestionDecompositionUpdate,
-    InitialAnswerUpdate,
-    SubQuestionResultsUpdate,
-    OrigQuestionRetrievalUpdate,
-    InitialAnswerQualityUpdate,
-    ExploratorySearchUpdate,
-):
-    base_raw_search_result: Annotated[list[QuestionRetrievalResult], add]
-
-
-## Graph Output State
-class SubQuestionRetrievalOutput(TypedDict):
-    log_messages: list[str]

backend/onyx/agents/agent_search/deep_search/initial/generate_sub_answers/edges.py

@@ -1,48 +0,0 @@
-from collections.abc import Hashable
-from datetime import datetime
-
-from langgraph.types import Send
-
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    AnswerQuestionOutput,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    SubQuestionAnsweringInput,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_initial_answer.states import (
-    SubQuestionRetrievalState,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import make_question_id
-
-
-def parallelize_initial_sub_question_answering(
-    state: SubQuestionRetrievalState,
-) -> list[Send | Hashable]:
-    """
-    LangGraph edge to parallelize the initial sub-question answering.
-    """
-    edge_start_time = datetime.now()
-    if len(state.initial_sub_questions) > 0:
-        return [
-            Send(
-                "answer_sub_question_subgraphs",
-                SubQuestionAnsweringInput(
-                    question=question,
-                    question_id=make_question_id(0, question_num + 1),
-                    log_messages=[
-                        f"{edge_start_time} -- Main Edge - Parallelize Initial Sub-question Answering"
-                    ],
-                ),
-            )
-            for question_num, question in enumerate(state.initial_sub_questions)
-        ]
-
-    else:
-        return [
-            Send(
-                "ingest_answers",
-                AnswerQuestionOutput(
-                    answer_results=[],
-                ),
-            )
-        ]

backend/onyx/agents/agent_search/deep_search/initial/generate_sub_answers/graph_builder.py

@@ -1,81 +0,0 @@
-from langgraph.graph import END
-from langgraph.graph import START
-from langgraph.graph import StateGraph
-
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.graph_builder import (
-    answer_query_graph_builder,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_sub_answers.edges import (
-    parallelize_initial_sub_question_answering,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_sub_answers.nodes.decompose_orig_question import (
-    decompose_orig_question,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_sub_answers.nodes.format_initial_sub_answers import (
-    format_initial_sub_answers,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_sub_answers.states import (
-    SubQuestionAnsweringInput,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_sub_answers.states import (
-    SubQuestionAnsweringState,
-)
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-test_mode = False
-
-
-def generate_sub_answers_graph_builder() -> StateGraph:
-    """
-    LangGraph graph builder for the initial sub-answer generation process.
-    It generates the initial sub-questions and produces the answers.
-    """
-
-    graph = StateGraph(
-        state_schema=SubQuestionAnsweringState,
-        input=SubQuestionAnsweringInput,
-    )
-
-    # Decompose the original question into sub-questions
-    graph.add_node(
-        node="decompose_orig_question",
-        action=decompose_orig_question,
-    )
-
-    # The sub-graph that executes the initial sub-question answering for
-    # each of the sub-questions.
-    answer_sub_question_subgraphs = answer_query_graph_builder().compile()
-    graph.add_node(
-        node="answer_sub_question_subgraphs",
-        action=answer_sub_question_subgraphs,
-    )
-
-    # Node that collects and formats the initial sub-question answers
-    graph.add_node(
-        node="format_initial_sub_question_answers",
-        action=format_initial_sub_answers,
-    )
-
-    graph.add_edge(
-        start_key=START,
-        end_key="decompose_orig_question",
-    )
-
-    graph.add_conditional_edges(
-        source="decompose_orig_question",
-        path=parallelize_initial_sub_question_answering,
-        path_map=["answer_sub_question_subgraphs"],
-    )
-    graph.add_edge(
-        start_key=["answer_sub_question_subgraphs"],
-        end_key="format_initial_sub_question_answers",
-    )
-
-    graph.add_edge(
-        start_key="format_initial_sub_question_answers",
-        end_key=END,
-    )
-
-    return graph

backend/onyx/agents/agent_search/deep_search/initial/generate_sub_answers/nodes/decompose_orig_question.py

@@ -1,157 +0,0 @@
-from datetime import datetime
-from typing import cast
-
-from langchain_core.messages import HumanMessage
-from langchain_core.messages import merge_content
-from langchain_core.runnables import RunnableConfig
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.deep_search.initial.generate_initial_answer.states import (
-    SubQuestionRetrievalState,
-)
-from onyx.agents.agent_search.deep_search.main.models import (
-    AgentRefinedMetrics,
-)
-from onyx.agents.agent_search.deep_search.main.operations import dispatch_subquestion
-from onyx.agents.agent_search.deep_search.main.operations import (
-    dispatch_subquestion_sep,
-)
-from onyx.agents.agent_search.deep_search.main.states import (
-    InitialQuestionDecompositionUpdate,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.agent_prompt_ops import (
-    build_history_prompt,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import dispatch_separated
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import write_custom_event
-from onyx.chat.models import StreamStopInfo
-from onyx.chat.models import StreamStopReason
-from onyx.chat.models import StreamType
-from onyx.chat.models import SubQuestionPiece
-from onyx.configs.agent_configs import AGENT_NUM_DOCS_FOR_DECOMPOSITION
-from onyx.prompts.agent_search import (
-    INITIAL_DECOMPOSITION_PROMPT_QUESTIONS_AFTER_SEARCH,
-)
-from onyx.prompts.agent_search import (
-    INITIAL_QUESTION_DECOMPOSITION_PROMPT,
-)
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def decompose_orig_question(
-    state: SubQuestionRetrievalState,
-    config: RunnableConfig,
-    writer: StreamWriter = lambda _: None,
-) -> InitialQuestionDecompositionUpdate:
-    """
-    LangGraph node to decompose the original question into sub-questions.
-    """
-    node_start_time = datetime.now()
-
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    question = graph_config.inputs.search_request.query
-    perform_initial_search_decomposition = (
-        graph_config.behavior.perform_initial_search_decomposition
-    )
-    # Get the rewritten queries in a defined format
-    model = graph_config.tooling.fast_llm
-
-    history = build_history_prompt(graph_config, question)
-
-    # Use the initial search results to inform the decomposition
-    agent_start_time = datetime.now()
-
-    # Initial search to inform decomposition. Just get top 3 fits
-
-    if perform_initial_search_decomposition:
-        # Due to unfortunate state representation in LangGraph, we need here to double check that the retrieval has
-        # happened prior to this point, allowing silent failure here since it is not critical for decomposition in
-        # all queries.
-        if not state.exploratory_search_results:
-            logger.error("Initial search for decomposition failed")
-
-        sample_doc_str = "\n\n".join(
-            [
-                doc.combined_content
-                for doc in state.exploratory_search_results[
-                    :AGENT_NUM_DOCS_FOR_DECOMPOSITION
-                ]
-            ]
-        )
-
-        decomposition_prompt = (
-            INITIAL_DECOMPOSITION_PROMPT_QUESTIONS_AFTER_SEARCH.format(
-                question=question, sample_doc_str=sample_doc_str, history=history
-            )
-        )
-
-    else:
-        decomposition_prompt = INITIAL_QUESTION_DECOMPOSITION_PROMPT.format(
-            question=question, history=history
-        )
-
-    # Start decomposition
-
-    msg = [HumanMessage(content=decomposition_prompt)]
-
-    # Send the initial question as a subquestion with number 0
-    write_custom_event(
-        "decomp_qs",
-        SubQuestionPiece(
-            sub_question=question,
-            level=0,
-            level_question_num=0,
-        ),
-        writer,
-    )
-
-    # dispatches custom events for subquestion tokens, adding in subquestion ids.
-    streamed_tokens = dispatch_separated(
-        model.stream(msg),
-        dispatch_subquestion(0, writer),
-        sep_callback=dispatch_subquestion_sep(0, writer),
-    )
-
-    stop_event = StreamStopInfo(
-        stop_reason=StreamStopReason.FINISHED,
-        stream_type=StreamType.SUB_QUESTIONS,
-        level=0,
-    )
-    write_custom_event("stream_finished", stop_event, writer)
-
-    deomposition_response = merge_content(*streamed_tokens)
-
-    # this call should only return strings. Commenting out for efficiency
-    # assert [type(tok) == str for tok in streamed_tokens]
-
-    # use no-op cast() instead of str() which runs code
-    # list_of_subquestions = clean_and_parse_list_string(cast(str, response))
-    list_of_subqs = cast(str, deomposition_response).split("\n")
-
-    decomp_list: list[str] = [sq.strip() for sq in list_of_subqs if sq.strip() != ""]
-
-    return InitialQuestionDecompositionUpdate(
-        initial_sub_questions=decomp_list,
-        agent_start_time=agent_start_time,
-        agent_refined_start_time=None,
-        agent_refined_end_time=None,
-        agent_refined_metrics=AgentRefinedMetrics(
-            refined_doc_boost_factor=None,
-            refined_question_boost_factor=None,
-            duration_s=None,
-        ),
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="initial - generate sub answers",
-                node_name="decompose original question",
-                node_start_time=node_start_time,
-                result=f"decomposed original question into {len(decomp_list)} subquestions",
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/initial/generate_sub_answers/nodes/format_initial_sub_answers.py

@@ -1,50 +0,0 @@
-from datetime import datetime
-
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    AnswerQuestionOutput,
-)
-from onyx.agents.agent_search.deep_search.main.states import (
-    SubQuestionResultsUpdate,
-)
-from onyx.agents.agent_search.shared_graph_utils.operators import (
-    dedup_inference_sections,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-
-
-def format_initial_sub_answers(
-    state: AnswerQuestionOutput,
-) -> SubQuestionResultsUpdate:
-    """
-    LangGraph node to format the answers to the initial sub-questions, including
-    deduping verified documents and context documents.
-    """
-    node_start_time = datetime.now()
-
-    documents = []
-    context_documents = []
-    cited_documents = []
-    answer_results = state.answer_results
-    for answer_result in answer_results:
-        documents.extend(answer_result.verified_reranked_documents)
-        context_documents.extend(answer_result.context_documents)
-        cited_documents.extend(answer_result.cited_documents)
-
-    return SubQuestionResultsUpdate(
-        # Deduping is done by the documents operator for the main graph
-        # so we might not need to dedup here
-        verified_reranked_documents=dedup_inference_sections(documents, []),
-        context_documents=dedup_inference_sections(context_documents, []),
-        cited_documents=dedup_inference_sections(cited_documents, []),
-        sub_question_results=answer_results,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="initial - generate sub answers",
-                node_name="format initial sub answers",
-                node_start_time=node_start_time,
-                result="",
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/initial/generate_sub_answers/states.py

@@ -1,34 +0,0 @@
-from typing import TypedDict
-
-from onyx.agents.agent_search.core_state import CoreState
-from onyx.agents.agent_search.deep_search.main.states import (
-    InitialAnswerUpdate,
-)
-from onyx.agents.agent_search.deep_search.main.states import (
-    InitialQuestionDecompositionUpdate,
-)
-from onyx.agents.agent_search.deep_search.main.states import (
-    SubQuestionResultsUpdate,
-)
-from onyx.context.search.models import InferenceSection
-
-
-### States ###
-class SubQuestionAnsweringInput(CoreState):
-    exploratory_search_results: list[InferenceSection]
-
-
-## Graph State
-class SubQuestionAnsweringState(
-    # This includes the core state
-    SubQuestionAnsweringInput,
-    InitialQuestionDecompositionUpdate,
-    InitialAnswerUpdate,
-    SubQuestionResultsUpdate,
-):
-    pass
-
-
-## Graph Output State
-class SubQuestionAnsweringOutput(TypedDict):
-    log_messages: list[str]

backend/onyx/agents/agent_search/deep_search/initial/retrieve_orig_question_docs/graph_builder.py

@@ -1,81 +0,0 @@
-from langgraph.graph import END
-from langgraph.graph import START
-from langgraph.graph import StateGraph
-
-from onyx.agents.agent_search.deep_search.initial.retrieve_orig_question_docs.nodes.format_orig_question_search_input import (
-    format_orig_question_search_input,
-)
-from onyx.agents.agent_search.deep_search.initial.retrieve_orig_question_docs.nodes.format_orig_question_search_output import (
-    format_orig_question_search_output,
-)
-from onyx.agents.agent_search.deep_search.initial.retrieve_orig_question_docs.states import (
-    BaseRawSearchInput,
-)
-from onyx.agents.agent_search.deep_search.initial.retrieve_orig_question_docs.states import (
-    BaseRawSearchOutput,
-)
-from onyx.agents.agent_search.deep_search.initial.retrieve_orig_question_docs.states import (
-    BaseRawSearchState,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.graph_builder import (
-    expanded_retrieval_graph_builder,
-)
-
-
-def retrieve_orig_question_docs_graph_builder() -> StateGraph:
-    """
-    LangGraph graph builder for the retrieval of documents
-    that are relevant to the original question. This is
-    largely a wrapper around the expanded retrieval process to
-    ensure parallelism with the sub-question answer process.
-    """
-    graph = StateGraph(
-        state_schema=BaseRawSearchState,
-        input=BaseRawSearchInput,
-        output=BaseRawSearchOutput,
-    )
-
-    ### Add nodes ###
-
-    # Format the original question search output
-    graph.add_node(
-        node="format_orig_question_search_output",
-        action=format_orig_question_search_output,
-    )
-
-    # The sub-graph that executes the expanded retrieval process
-    expanded_retrieval = expanded_retrieval_graph_builder().compile()
-    graph.add_node(
-        node="retrieve_orig_question_docs_subgraph",
-        action=expanded_retrieval,
-    )
-
-    # Format the original question search input
-    graph.add_node(
-        node="format_orig_question_search_input",
-        action=format_orig_question_search_input,
-    )
-
-    ### Add edges ###
-
-    graph.add_edge(start_key=START, end_key="format_orig_question_search_input")
-
-    graph.add_edge(
-        start_key="format_orig_question_search_input",
-        end_key="retrieve_orig_question_docs_subgraph",
-    )
-    graph.add_edge(
-        start_key="retrieve_orig_question_docs_subgraph",
-        end_key="format_orig_question_search_output",
-    )
-
-    graph.add_edge(
-        start_key="format_orig_question_search_output",
-        end_key=END,
-    )
-
-    return graph
-
-
-if __name__ == "__main__":
-    pass

backend/onyx/agents/agent_search/deep_search/initial/retrieve_orig_question_docs/nodes/format_orig_question_search_input.py

@@ -1,28 +0,0 @@
-from typing import cast
-
-from langchain_core.runnables.config import RunnableConfig
-
-from onyx.agents.agent_search.core_state import CoreState
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalInput,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def format_orig_question_search_input(
-    state: CoreState, config: RunnableConfig
-) -> ExpandedRetrievalInput:
-    """
-    LangGraph node to format the search input for the original question.
-    """
-    logger.debug("generate_raw_search_data")
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    return ExpandedRetrievalInput(
-        question=graph_config.inputs.search_request.query,
-        base_search=True,
-        sub_question_id=None,  # This graph is always and only used for the original question
-        log_messages=[],
-    )

backend/onyx/agents/agent_search/deep_search/initial/retrieve_orig_question_docs/nodes/format_orig_question_search_output.py

@@ -1,30 +0,0 @@
-from onyx.agents.agent_search.deep_search.main.states import OrigQuestionRetrievalUpdate
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalOutput,
-)
-from onyx.agents.agent_search.shared_graph_utils.models import AgentChunkRetrievalStats
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def format_orig_question_search_output(
-    state: ExpandedRetrievalOutput,
-) -> OrigQuestionRetrievalUpdate:
-    """
-    LangGraph node to format the search result for the original question into the
-    proper format.
-    """
-    sub_question_retrieval_stats = state.expanded_retrieval_result.retrieval_stats
-    if sub_question_retrieval_stats is None:
-        sub_question_retrieval_stats = AgentChunkRetrievalStats()
-    else:
-        sub_question_retrieval_stats = sub_question_retrieval_stats
-
-    return OrigQuestionRetrievalUpdate(
-        orig_question_verified_reranked_documents=state.expanded_retrieval_result.verified_reranked_documents,
-        orig_question_sub_query_retrieval_results=state.expanded_retrieval_result.expanded_query_results,
-        orig_question_retrieved_documents=state.retrieved_documents,
-        orig_question_retrieval_stats=sub_question_retrieval_stats,
-        log_messages=[],
-    )

backend/onyx/agents/agent_search/deep_search/initial/retrieve_orig_question_docs/states.py

@@ -1,29 +0,0 @@
-from onyx.agents.agent_search.deep_search.main.states import (
-    OrigQuestionRetrievalUpdate,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalInput,
-)
-
-
-## Graph Input State
-class BaseRawSearchInput(ExpandedRetrievalInput):
-    pass
-
-
-## Graph Output State
-class BaseRawSearchOutput(OrigQuestionRetrievalUpdate):
-    """
-    This is a list of results even though each call of this subgraph only returns one result.
-    This is because if we parallelize the answer query subgraph, there will be multiple
-      results in a list so the add operator is used to add them together.
-    """
-
-    # base_expanded_retrieval_result: QuestionRetrievalResult = QuestionRetrievalResult()
-
-
-## Graph State
-class BaseRawSearchState(
-    BaseRawSearchInput, BaseRawSearchOutput, OrigQuestionRetrievalUpdate
-):
-    pass

backend/onyx/agents/agent_search/deep_search/main/edges.py

@@ -1,113 +0,0 @@
-from collections.abc import Hashable
-from datetime import datetime
-from typing import cast
-from typing import Literal
-
-from langchain_core.runnables import RunnableConfig
-from langgraph.types import Send
-
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    AnswerQuestionOutput,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    SubQuestionAnsweringInput,
-)
-from onyx.agents.agent_search.deep_search.main.states import MainState
-from onyx.agents.agent_search.deep_search.main.states import (
-    RequireRefinemenEvalUpdate,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.utils import make_question_id
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def route_initial_tool_choice(
-    state: MainState, config: RunnableConfig
-) -> Literal["tool_call", "start_agent_search", "logging_node"]:
-    """
-    LangGraph edge to route to agent search.
-    """
-    agent_config = cast(GraphConfig, config["metadata"]["config"])
-    if state.tool_choice is not None:
-        if (
-            agent_config.behavior.use_agentic_search
-            and agent_config.tooling.search_tool is not None
-            and state.tool_choice.tool.name == agent_config.tooling.search_tool.name
-        ):
-            return "start_agent_search"
-        else:
-            return "tool_call"
-    else:
-        return "logging_node"
-
-
-def parallelize_initial_sub_question_answering(
-    state: MainState,
-) -> list[Send | Hashable]:
-    edge_start_time = datetime.now()
-    if len(state.initial_sub_questions) > 0:
-        return [
-            Send(
-                "answer_query_subgraph",
-                SubQuestionAnsweringInput(
-                    question=question,
-                    question_id=make_question_id(0, question_num + 1),
-                    log_messages=[
-                        f"{edge_start_time} -- Main Edge - Parallelize Initial Sub-question Answering"
-                    ],
-                ),
-            )
-            for question_num, question in enumerate(state.initial_sub_questions)
-        ]
-
-    else:
-        return [
-            Send(
-                "ingest_answers",
-                AnswerQuestionOutput(
-                    answer_results=[],
-                ),
-            )
-        ]
-
-
-# Define the function that determines whether to continue or not
-def continue_to_refined_answer_or_end(
-    state: RequireRefinemenEvalUpdate,
-) -> Literal["create_refined_sub_questions", "logging_node"]:
-    if state.require_refined_answer_eval:
-        return "create_refined_sub_questions"
-    else:
-        return "logging_node"
-
-
-def parallelize_refined_sub_question_answering(
-    state: MainState,
-) -> list[Send | Hashable]:
-    edge_start_time = datetime.now()
-    if len(state.refined_sub_questions) > 0:
-        return [
-            Send(
-                "answer_refined_question_subgraphs",
-                SubQuestionAnsweringInput(
-                    question=question_data.sub_question,
-                    question_id=make_question_id(1, question_num),
-                    log_messages=[
-                        f"{edge_start_time} -- Main Edge - Parallelize Refined Sub-question Answering"
-                    ],
-                ),
-            )
-            for question_num, question_data in state.refined_sub_questions.items()
-        ]
-
-    else:
-        return [
-            Send(
-                "ingest_refined_sub_answers",
-                AnswerQuestionOutput(
-                    answer_results=[],
-                ),
-            )
-        ]

backend/onyx/agents/agent_search/deep_search/main/graph_builder.py

@@ -1,265 +0,0 @@
-from langgraph.graph import END
-from langgraph.graph import START
-from langgraph.graph import StateGraph
-
-from onyx.agents.agent_search.deep_search.initial.generate_initial_answer.graph_builder import (
-    generate_initial_answer_graph_builder,
-)
-from onyx.agents.agent_search.deep_search.main.edges import (
-    continue_to_refined_answer_or_end,
-)
-from onyx.agents.agent_search.deep_search.main.edges import (
-    parallelize_refined_sub_question_answering,
-)
-from onyx.agents.agent_search.deep_search.main.edges import (
-    route_initial_tool_choice,
-)
-from onyx.agents.agent_search.deep_search.main.nodes.compare_answers import (
-    compare_answers,
-)
-from onyx.agents.agent_search.deep_search.main.nodes.create_refined_sub_questions import (
-    create_refined_sub_questions,
-)
-from onyx.agents.agent_search.deep_search.main.nodes.decide_refinement_need import (
-    decide_refinement_need,
-)
-from onyx.agents.agent_search.deep_search.main.nodes.extract_entities_terms import (
-    extract_entities_terms,
-)
-from onyx.agents.agent_search.deep_search.main.nodes.generate_refined_answer import (
-    generate_refined_answer,
-)
-from onyx.agents.agent_search.deep_search.main.nodes.ingest_refined_sub_answers import (
-    ingest_refined_sub_answers,
-)
-from onyx.agents.agent_search.deep_search.main.nodes.persist_agent_results import (
-    persist_agent_results,
-)
-from onyx.agents.agent_search.deep_search.main.nodes.start_agent_search import (
-    start_agent_search,
-)
-from onyx.agents.agent_search.deep_search.main.states import MainInput
-from onyx.agents.agent_search.deep_search.main.states import MainState
-from onyx.agents.agent_search.deep_search.refinement.consolidate_sub_answers.graph_builder import (
-    answer_refined_query_graph_builder,
-)
-from onyx.agents.agent_search.orchestration.nodes.basic_use_tool_response import (
-    basic_use_tool_response,
-)
-from onyx.agents.agent_search.orchestration.nodes.llm_tool_choice import llm_tool_choice
-from onyx.agents.agent_search.orchestration.nodes.prepare_tool_input import (
-    prepare_tool_input,
-)
-from onyx.agents.agent_search.orchestration.nodes.tool_call import tool_call
-from onyx.agents.agent_search.shared_graph_utils.utils import get_test_config
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-test_mode = False
-
-
-def main_graph_builder(test_mode: bool = False) -> StateGraph:
-    """
-    LangGraph graph builder for the main agent search process.
-    """
-    graph = StateGraph(
-        state_schema=MainState,
-        input=MainInput,
-    )
-
-    # Prepare the tool input
-    graph.add_node(
-        node="prepare_tool_input",
-        action=prepare_tool_input,
-    )
-
-    # Choose the initial tool
-    graph.add_node(
-        node="initial_tool_choice",
-        action=llm_tool_choice,
-    )
-
-    # Call the tool, if required
-    graph.add_node(
-        node="tool_call",
-        action=tool_call,
-    )
-
-    # Use the tool response
-    graph.add_node(
-        node="basic_use_tool_response",
-        action=basic_use_tool_response,
-    )
-
-    # Start the agent search process
-    graph.add_node(
-        node="start_agent_search",
-        action=start_agent_search,
-    )
-
-    # The sub-graph for the initial answer generation
-    generate_initial_answer_subgraph = generate_initial_answer_graph_builder().compile()
-    graph.add_node(
-        node="generate_initial_answer_subgraph",
-        action=generate_initial_answer_subgraph,
-    )
-
-    # Create the refined sub-questions
-    graph.add_node(
-        node="create_refined_sub_questions",
-        action=create_refined_sub_questions,
-    )
-
-    # Subgraph for the refined sub-answer generation
-    answer_refined_question = answer_refined_query_graph_builder().compile()
-    graph.add_node(
-        node="answer_refined_question_subgraphs",
-        action=answer_refined_question,
-    )
-
-    # Ingest the refined sub-answers
-    graph.add_node(
-        node="ingest_refined_sub_answers",
-        action=ingest_refined_sub_answers,
-    )
-
-    # Node to generate the refined answer
-    graph.add_node(
-        node="generate_refined_answer",
-        action=generate_refined_answer,
-    )
-
-    # Early node to extract the entities and terms from the initial answer,
-    # This information is used to inform the creation the refined sub-questions
-    graph.add_node(
-        node="extract_entity_term",
-        action=extract_entities_terms,
-    )
-
-    # Decide if the answer needs to be refined (currently always true)
-    graph.add_node(
-        node="decide_refinement_need",
-        action=decide_refinement_need,
-    )
-
-    # Compare the initial and refined answers, and determine whether
-    # the refined answer is sufficiently better
-    graph.add_node(
-        node="compare_answers",
-        action=compare_answers,
-    )
-
-    # Log the results. This will log the stats as well as the answers, sub-questions, and sub-answers
-    graph.add_node(
-        node="logging_node",
-        action=persist_agent_results,
-    )
-
-    ### Add edges ###
-
-    graph.add_edge(start_key=START, end_key="prepare_tool_input")
-
-    graph.add_edge(
-        start_key="prepare_tool_input",
-        end_key="initial_tool_choice",
-    )
-
-    graph.add_conditional_edges(
-        "initial_tool_choice",
-        route_initial_tool_choice,
-        ["tool_call", "start_agent_search", "logging_node"],
-    )
-
-    graph.add_edge(
-        start_key="tool_call",
-        end_key="basic_use_tool_response",
-    )
-    graph.add_edge(
-        start_key="basic_use_tool_response",
-        end_key="logging_node",
-    )
-
-    graph.add_edge(
-        start_key="start_agent_search",
-        end_key="generate_initial_answer_subgraph",
-    )
-
-    graph.add_edge(
-        start_key="start_agent_search",
-        end_key="extract_entity_term",
-    )
-
-    # Wait for the initial answer generation and the entity/term extraction to be complete
-    # before deciding if a refinement is needed.
-    graph.add_edge(
-        start_key=["generate_initial_answer_subgraph", "extract_entity_term"],
-        end_key="decide_refinement_need",
-    )
-
-    graph.add_conditional_edges(
-        source="decide_refinement_need",
-        path=continue_to_refined_answer_or_end,
-        path_map=["create_refined_sub_questions", "logging_node"],
-    )
-
-    graph.add_conditional_edges(
-        source="create_refined_sub_questions",
-        path=parallelize_refined_sub_question_answering,
-        path_map=["answer_refined_question_subgraphs"],
-    )
-    graph.add_edge(
-        start_key="answer_refined_question_subgraphs",
-        end_key="ingest_refined_sub_answers",
-    )
-
-    graph.add_edge(
-        start_key="ingest_refined_sub_answers",
-        end_key="generate_refined_answer",
-    )
-
-    graph.add_edge(
-        start_key="generate_refined_answer",
-        end_key="compare_answers",
-    )
-    graph.add_edge(
-        start_key="compare_answers",
-        end_key="logging_node",
-    )
-
-    graph.add_edge(
-        start_key="logging_node",
-        end_key=END,
-    )
-
-    return graph
-
-
-if __name__ == "__main__":
-    pass
-
-    from onyx.db.engine import get_session_context_manager
-    from onyx.llm.factory import get_default_llms
-    from onyx.context.search.models import SearchRequest
-
-    graph = main_graph_builder()
-    compiled_graph = graph.compile()
-    primary_llm, fast_llm = get_default_llms()
-
-    with get_session_context_manager() as db_session:
-        search_request = SearchRequest(query="Who created Excel?")
-        graph_config = get_test_config(
-            db_session, primary_llm, fast_llm, search_request
-        )
-
-        inputs = MainInput(
-            base_question=graph_config.inputs.search_request.query, log_messages=[]
-        )
-
-        for thing in compiled_graph.stream(
-            input=inputs,
-            config={"configurable": {"config": graph_config}},
-            stream_mode="custom",
-            subgraphs=True,
-        ):
-            logger.debug(thing)

backend/onyx/agents/agent_search/deep_search/main/models.py

@@ -1,36 +0,0 @@
-from pydantic import BaseModel
-
-
-class RefinementSubQuestion(BaseModel):
-    sub_question: str
-    sub_question_id: str
-    verified: bool
-    answered: bool
-    answer: str
-
-
-class AgentTimings(BaseModel):
-    base_duration_s: float | None
-    refined_duration_s: float | None
-    full_duration_s: float | None
-
-
-class AgentBaseMetrics(BaseModel):
-    num_verified_documents_total: int | None
-    num_verified_documents_core: int | None
-    verified_avg_score_core: float | None
-    num_verified_documents_base: int | float | None
-    verified_avg_score_base: float | None = None
-    base_doc_boost_factor: float | None = None
-    support_boost_factor: float | None = None
-    duration_s: float | None = None
-
-
-class AgentRefinedMetrics(BaseModel):
-    refined_doc_boost_factor: float | None = None
-    refined_question_boost_factor: float | None = None
-    duration_s: float | None = None
-
-
-class AgentAdditionalMetrics(BaseModel):
-    pass

backend/onyx/agents/agent_search/deep_search/main/nodes/compare_answers.py

@@ -1,71 +0,0 @@
-from datetime import datetime
-from typing import cast
-
-from langchain_core.messages import HumanMessage
-from langchain_core.runnables import RunnableConfig
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.deep_search.main.states import (
-    InitialRefinedAnswerComparisonUpdate,
-)
-from onyx.agents.agent_search.deep_search.main.states import MainState
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import write_custom_event
-from onyx.chat.models import RefinedAnswerImprovement
-from onyx.prompts.agent_search import (
-    INITIAL_REFINED_ANSWER_COMPARISON_PROMPT,
-)
-
-
-def compare_answers(
-    state: MainState, config: RunnableConfig, writer: StreamWriter = lambda _: None
-) -> InitialRefinedAnswerComparisonUpdate:
-    """
-    LangGraph node to compare the initial answer and the refined answer and determine if the
-    refined answer is sufficiently better than the initial answer.
-    """
-    node_start_time = datetime.now()
-
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    question = graph_config.inputs.search_request.query
-    initial_answer = state.initial_answer
-    refined_answer = state.refined_answer
-
-    compare_answers_prompt = INITIAL_REFINED_ANSWER_COMPARISON_PROMPT.format(
-        question=question, initial_answer=initial_answer, refined_answer=refined_answer
-    )
-
-    msg = [HumanMessage(content=compare_answers_prompt)]
-
-    # Get the rewritten queries in a defined format
-    model = graph_config.tooling.fast_llm
-
-    # no need to stream this
-    resp = model.invoke(msg)
-
-    refined_answer_improvement = (
-        isinstance(resp.content, str) and "yes" in resp.content.lower()
-    )
-
-    write_custom_event(
-        "refined_answer_improvement",
-        RefinedAnswerImprovement(
-            refined_answer_improvement=refined_answer_improvement,
-        ),
-        writer,
-    )
-
-    return InitialRefinedAnswerComparisonUpdate(
-        refined_answer_improvement_eval=refined_answer_improvement,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="main",
-                node_name="compare answers",
-                node_start_time=node_start_time,
-                result=f"Answer comparison: {refined_answer_improvement}",
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/main/nodes/create_refined_sub_questions.py

@@ -1,134 +0,0 @@
-from datetime import datetime
-from typing import cast
-
-from langchain_core.messages import HumanMessage
-from langchain_core.messages import merge_content
-from langchain_core.runnables import RunnableConfig
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.deep_search.main.models import (
-    RefinementSubQuestion,
-)
-from onyx.agents.agent_search.deep_search.main.operations import dispatch_subquestion
-from onyx.agents.agent_search.deep_search.main.operations import (
-    dispatch_subquestion_sep,
-)
-from onyx.agents.agent_search.deep_search.main.states import MainState
-from onyx.agents.agent_search.deep_search.main.states import (
-    RefinedQuestionDecompositionUpdate,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.agent_prompt_ops import (
-    build_history_prompt,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import dispatch_separated
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    format_entity_term_extraction,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import make_question_id
-from onyx.agents.agent_search.shared_graph_utils.utils import write_custom_event
-from onyx.prompts.agent_search import (
-    REFINEMENT_QUESTION_DECOMPOSITION_PROMPT,
-)
-from onyx.tools.models import ToolCallKickoff
-
-
-def create_refined_sub_questions(
-    state: MainState, config: RunnableConfig, writer: StreamWriter = lambda _: None
-) -> RefinedQuestionDecompositionUpdate:
-    """
-    LangGraph node to create refined sub-questions based on the initial answer, the history,
-    the entity term extraction results found earlier, and the sub-questions that were answered and failed.
-    """
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    write_custom_event(
-        "start_refined_answer_creation",
-        ToolCallKickoff(
-            tool_name="agent_search_1",
-            tool_args={
-                "query": graph_config.inputs.search_request.query,
-                "answer": state.initial_answer,
-            },
-        ),
-        writer,
-    )
-
-    node_start_time = datetime.now()
-
-    agent_refined_start_time = datetime.now()
-
-    question = graph_config.inputs.search_request.query
-    base_answer = state.initial_answer
-    history = build_history_prompt(graph_config, question)
-    # get the entity term extraction dict and properly format it
-    entity_retlation_term_extractions = state.entity_relation_term_extractions
-
-    entity_term_extraction_str = format_entity_term_extraction(
-        entity_retlation_term_extractions
-    )
-
-    initial_question_answers = state.sub_question_results
-
-    addressed_question_list = [
-        x.question for x in initial_question_answers if x.verified_high_quality
-    ]
-
-    failed_question_list = [
-        x.question for x in initial_question_answers if not x.verified_high_quality
-    ]
-
-    msg = [
-        HumanMessage(
-            content=REFINEMENT_QUESTION_DECOMPOSITION_PROMPT.format(
-                question=question,
-                history=history,
-                entity_term_extraction_str=entity_term_extraction_str,
-                base_answer=base_answer,
-                answered_sub_questions="\n - ".join(addressed_question_list),
-                failed_sub_questions="\n - ".join(failed_question_list),
-            ),
-        )
-    ]
-
-    # Grader
-    model = graph_config.tooling.fast_llm
-
-    streamed_tokens = dispatch_separated(
-        model.stream(msg),
-        dispatch_subquestion(1, writer),
-        sep_callback=dispatch_subquestion_sep(1, writer),
-    )
-    response = merge_content(*streamed_tokens)
-
-    if isinstance(response, str):
-        parsed_response = [q for q in response.split("\n") if q.strip() != ""]
-    else:
-        raise ValueError("LLM response is not a string")
-
-    refined_sub_question_dict = {}
-    for sub_question_num, sub_question in enumerate(parsed_response):
-        refined_sub_question = RefinementSubQuestion(
-            sub_question=sub_question,
-            sub_question_id=make_question_id(1, sub_question_num + 1),
-            verified=False,
-            answered=False,
-            answer="",
-        )
-
-        refined_sub_question_dict[sub_question_num + 1] = refined_sub_question
-
-    return RefinedQuestionDecompositionUpdate(
-        refined_sub_questions=refined_sub_question_dict,
-        agent_refined_start_time=agent_refined_start_time,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="main",
-                node_name="create refined sub questions",
-                node_start_time=node_start_time,
-                result=f"Created {len(refined_sub_question_dict)} refined sub questions",
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/main/nodes/decide_refinement_need.py

@@ -1,47 +0,0 @@
-from datetime import datetime
-from typing import cast
-
-from langchain_core.runnables import RunnableConfig
-
-from onyx.agents.agent_search.deep_search.main.states import MainState
-from onyx.agents.agent_search.deep_search.main.states import (
-    RequireRefinemenEvalUpdate,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-
-
-def decide_refinement_need(
-    state: MainState, config: RunnableConfig
-) -> RequireRefinemenEvalUpdate:
-    """
-    LangGraph node to decide if refinement is needed based on the initial answer and the question.
-    At present, we always refine.
-    """
-    node_start_time = datetime.now()
-
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-
-    decision = True  # TODO: just for current testing purposes
-
-    log_messages = [
-        get_langgraph_node_log_string(
-            graph_component="main",
-            node_name="decide refinement need",
-            node_start_time=node_start_time,
-            result=f"Refinement decision: {decision}",
-        )
-    ]
-
-    if graph_config.behavior.allow_refinement:
-        return RequireRefinemenEvalUpdate(
-            require_refined_answer_eval=decision,
-            log_messages=log_messages,
-        )
-    else:
-        return RequireRefinemenEvalUpdate(
-            require_refined_answer_eval=False,
-            log_messages=log_messages,
-        )

backend/onyx/agents/agent_search/deep_search/main/nodes/extract_entities_terms.py

@@ -1,116 +0,0 @@
-from datetime import datetime
-from typing import cast
-
-from langchain_core.messages import HumanMessage
-from langchain_core.runnables import RunnableConfig
-
-from onyx.agents.agent_search.deep_search.main.operations import logger
-from onyx.agents.agent_search.deep_search.main.states import (
-    EntityTermExtractionUpdate,
-)
-from onyx.agents.agent_search.deep_search.main.states import MainState
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.agent_prompt_ops import (
-    trim_prompt_piece,
-)
-from onyx.agents.agent_search.shared_graph_utils.models import EntityExtractionResult
-from onyx.agents.agent_search.shared_graph_utils.models import (
-    EntityRelationshipTermExtraction,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import format_docs
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-from onyx.configs.constants import NUM_EXPLORATORY_DOCS
-from onyx.prompts.agent_search import ENTITY_TERM_EXTRACTION_PROMPT
-from onyx.prompts.agent_search import ENTITY_TERM_EXTRACTION_PROMPT_JSON_EXAMPLE
-
-
-def extract_entities_terms(
-    state: MainState, config: RunnableConfig
-) -> EntityTermExtractionUpdate:
-    """
-    LangGraph node to extract entities, relationships, and terms from the initial search results.
-    This data is used to inform particularly the sub-questions that are created for the refined answer.
-    """
-    node_start_time = datetime.now()
-
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    if not graph_config.behavior.allow_refinement:
-        return EntityTermExtractionUpdate(
-            entity_relation_term_extractions=EntityRelationshipTermExtraction(
-                entities=[],
-                relationships=[],
-                terms=[],
-            ),
-            log_messages=[
-                get_langgraph_node_log_string(
-                    graph_component="main",
-                    node_name="extract entities terms",
-                    node_start_time=node_start_time,
-                    result="Refinement is not allowed",
-                )
-            ],
-        )
-
-    # first four lines duplicates from generate_initial_answer
-    question = graph_config.inputs.search_request.query
-    initial_search_docs = state.exploratory_search_results[:NUM_EXPLORATORY_DOCS]
-
-    # start with the entity/term/extraction
-    doc_context = format_docs(initial_search_docs)
-
-    # Calculation here is only approximate
-    doc_context = trim_prompt_piece(
-        graph_config.tooling.fast_llm.config,
-        doc_context,
-        ENTITY_TERM_EXTRACTION_PROMPT
-        + question
-        + ENTITY_TERM_EXTRACTION_PROMPT_JSON_EXAMPLE,
-    )
-
-    msg = [
-        HumanMessage(
-            content=ENTITY_TERM_EXTRACTION_PROMPT.format(
-                question=question, context=doc_context
-            )
-            + ENTITY_TERM_EXTRACTION_PROMPT_JSON_EXAMPLE,
-        )
-    ]
-    fast_llm = graph_config.tooling.fast_llm
-    # Grader
-    llm_response = fast_llm.invoke(
-        prompt=msg,
-    )
-
-    cleaned_response = (
-        str(llm_response.content).replace("```json\n", "").replace("\n```", "")
-    )
-    first_bracket = cleaned_response.find("{")
-    last_bracket = cleaned_response.rfind("}")
-    cleaned_response = cleaned_response[first_bracket : last_bracket + 1]
-
-    try:
-        entity_extraction_result = EntityExtractionResult.model_validate_json(
-            cleaned_response
-        )
-    except ValueError:
-        logger.error("Failed to parse LLM response as JSON in Entity-Term Extraction")
-        entity_extraction_result = EntityExtractionResult(
-            retrieved_entities_relationships=EntityRelationshipTermExtraction(
-                entities=[],
-                relationships=[],
-                terms=[],
-            ),
-        )
-
-    return EntityTermExtractionUpdate(
-        entity_relation_term_extractions=entity_extraction_result.retrieved_entities_relationships,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="main",
-                node_name="extract entities terms",
-                node_start_time=node_start_time,
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/main/nodes/generate_refined_answer.py

@@ -1,339 +0,0 @@
-from datetime import datetime
-from typing import Any
-from typing import cast
-
-from langchain_core.messages import HumanMessage
-from langchain_core.messages import merge_content
-from langchain_core.runnables import RunnableConfig
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.deep_search.main.models import (
-    AgentRefinedMetrics,
-)
-from onyx.agents.agent_search.deep_search.main.operations import get_query_info
-from onyx.agents.agent_search.deep_search.main.operations import logger
-from onyx.agents.agent_search.deep_search.main.states import MainState
-from onyx.agents.agent_search.deep_search.main.states import (
-    RefinedAnswerUpdate,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.agent_prompt_ops import (
-    get_prompt_enrichment_components,
-)
-from onyx.agents.agent_search.shared_graph_utils.agent_prompt_ops import (
-    trim_prompt_piece,
-)
-from onyx.agents.agent_search.shared_graph_utils.models import InferenceSection
-from onyx.agents.agent_search.shared_graph_utils.models import RefinedAgentStats
-from onyx.agents.agent_search.shared_graph_utils.operators import (
-    dedup_inference_sections,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    dispatch_main_answer_stop_info,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import format_docs
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import parse_question_id
-from onyx.agents.agent_search.shared_graph_utils.utils import relevance_from_docs
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    remove_document_citations,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import write_custom_event
-from onyx.chat.models import AgentAnswerPiece
-from onyx.chat.models import ExtendedToolResponse
-from onyx.configs.agent_configs import AGENT_MAX_ANSWER_CONTEXT_DOCS
-from onyx.configs.agent_configs import AGENT_MIN_ORIG_QUESTION_DOCS
-from onyx.prompts.agent_search import (
-    REFINED_ANSWER_PROMPT_W_SUB_QUESTIONS,
-)
-from onyx.prompts.agent_search import (
-    REFINED_ANSWER_PROMPT_WO_SUB_QUESTIONS,
-)
-from onyx.prompts.agent_search import (
-    SUB_QUESTION_ANSWER_TEMPLATE_REFINED,
-)
-from onyx.prompts.agent_search import UNKNOWN_ANSWER
-from onyx.tools.tool_implementations.search.search_tool import yield_search_responses
-
-
-def generate_refined_answer(
-    state: MainState, config: RunnableConfig, writer: StreamWriter = lambda _: None
-) -> RefinedAnswerUpdate:
-    """
-    LangGraph node to generate the refined answer.
-    """
-
-    node_start_time = datetime.now()
-
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    question = graph_config.inputs.search_request.query
-    prompt_enrichment_components = get_prompt_enrichment_components(graph_config)
-
-    persona_contextualized_prompt = (
-        prompt_enrichment_components.persona_prompts.contextualized_prompt
-    )
-
-    verified_reranked_documents = state.verified_reranked_documents
-    sub_questions_cited_documents = state.cited_documents
-    original_question_verified_documents = (
-        state.orig_question_verified_reranked_documents
-    )
-    original_question_retrieved_documents = state.orig_question_retrieved_documents
-
-    consolidated_context_docs: list[InferenceSection] = sub_questions_cited_documents
-
-    counter = 0
-    for original_doc_number, original_doc in enumerate(
-        original_question_verified_documents
-    ):
-        if original_doc_number not in sub_questions_cited_documents:
-            if (
-                counter <= AGENT_MIN_ORIG_QUESTION_DOCS
-                or len(consolidated_context_docs)
-                < 1.5
-                * AGENT_MAX_ANSWER_CONTEXT_DOCS  # allow for larger context in refinement
-            ):
-                consolidated_context_docs.append(original_doc)
-                counter += 1
-
-    # sort docs by their scores - though the scores refer to different questions
-    relevant_docs = dedup_inference_sections(
-        consolidated_context_docs, consolidated_context_docs
-    )
-
-    streaming_docs = (
-        relevant_docs
-        if len(relevant_docs) > 0
-        else original_question_retrieved_documents[:15]
-    )
-
-    query_info = get_query_info(state.orig_question_sub_query_retrieval_results)
-    assert (
-        graph_config.tooling.search_tool
-    ), "search_tool must be provided for agentic search"
-    # stream refined answer docs, or original question docs if no relevant docs are found
-    relevance_list = relevance_from_docs(relevant_docs)
-    for tool_response in yield_search_responses(
-        query=question,
-        reranked_sections=streaming_docs,
-        final_context_sections=streaming_docs,
-        search_query_info=query_info,
-        get_section_relevance=lambda: relevance_list,
-        search_tool=graph_config.tooling.search_tool,
-    ):
-        write_custom_event(
-            "tool_response",
-            ExtendedToolResponse(
-                id=tool_response.id,
-                response=tool_response.response,
-                level=1,
-                level_question_num=0,  # 0, 0 is the base question
-            ),
-            writer,
-        )
-
-    if len(verified_reranked_documents) > 0:
-        refined_doc_effectiveness = len(relevant_docs) / len(
-            verified_reranked_documents
-        )
-    else:
-        refined_doc_effectiveness = 10.0
-
-    sub_question_answer_results = state.sub_question_results
-
-    answered_sub_question_answer_list: list[str] = []
-    sub_questions: list[str] = []
-    initial_answered_sub_questions: set[str] = set()
-    refined_answered_sub_questions: set[str] = set()
-
-    for i, result in enumerate(sub_question_answer_results, 1):
-        question_level, _ = parse_question_id(result.question_id)
-        sub_questions.append(result.question)
-
-        if (
-            result.verified_high_quality
-            and result.answer
-            and result.answer != UNKNOWN_ANSWER
-        ):
-            sub_question_type = "initial" if question_level == 0 else "refined"
-            question_set = (
-                initial_answered_sub_questions
-                if question_level == 0
-                else refined_answered_sub_questions
-            )
-            question_set.add(result.question)
-
-            answered_sub_question_answer_list.append(
-                SUB_QUESTION_ANSWER_TEMPLATE_REFINED.format(
-                    sub_question=result.question,
-                    sub_answer=result.answer,
-                    sub_question_num=i,
-                    sub_question_type=sub_question_type,
-                )
-            )
-
-    # Calculate efficiency
-    total_answered_questions = (
-        initial_answered_sub_questions | refined_answered_sub_questions
-    )
-    revision_question_efficiency = (
-        len(total_answered_questions) / len(initial_answered_sub_questions)
-        if initial_answered_sub_questions
-        else 10.0
-        if refined_answered_sub_questions
-        else 1.0
-    )
-
-    sub_question_answer_str = "\n\n------\n\n".join(
-        set(answered_sub_question_answer_list)
-    )
-    initial_answer = state.initial_answer or ""
-
-    # Choose appropriate prompt template
-    base_prompt = (
-        REFINED_ANSWER_PROMPT_W_SUB_QUESTIONS
-        if answered_sub_question_answer_list
-        else REFINED_ANSWER_PROMPT_WO_SUB_QUESTIONS
-    )
-
-    model = graph_config.tooling.fast_llm
-    relevant_docs_str = format_docs(relevant_docs)
-    relevant_docs_str = trim_prompt_piece(
-        model.config,
-        relevant_docs_str,
-        base_prompt
-        + question
-        + sub_question_answer_str
-        + initial_answer
-        + persona_contextualized_prompt
-        + prompt_enrichment_components.history,
-    )
-
-    msg = [
-        HumanMessage(
-            content=base_prompt.format(
-                question=question,
-                history=prompt_enrichment_components.history,
-                answered_sub_questions=remove_document_citations(
-                    sub_question_answer_str
-                ),
-                relevant_docs=relevant_docs_str,
-                initial_answer=remove_document_citations(initial_answer)
-                if initial_answer
-                else None,
-                persona_specification=persona_contextualized_prompt,
-                date_prompt=prompt_enrichment_components.date_str,
-            )
-        )
-    ]
-
-    streamed_tokens: list[str | list[str | dict[str, Any]]] = [""]
-    dispatch_timings: list[float] = []
-    for message in model.stream(msg):
-        # TODO: in principle, the answer here COULD contain images, but we don't support that yet
-        content = message.content
-        if not isinstance(content, str):
-            raise ValueError(
-                f"Expected content to be a string, but got {type(content)}"
-            )
-
-        start_stream_token = datetime.now()
-        write_custom_event(
-            "refined_agent_answer",
-            AgentAnswerPiece(
-                answer_piece=content,
-                level=1,
-                level_question_num=0,
-                answer_type="agent_level_answer",
-            ),
-            writer,
-        )
-        end_stream_token = datetime.now()
-        dispatch_timings.append((end_stream_token - start_stream_token).microseconds)
-        streamed_tokens.append(content)
-
-    logger.debug(
-        f"Average dispatch time for refined answer: {sum(dispatch_timings) / len(dispatch_timings)}"
-    )
-    dispatch_main_answer_stop_info(1, writer)
-    response = merge_content(*streamed_tokens)
-    answer = cast(str, response)
-
-    refined_agent_stats = RefinedAgentStats(
-        revision_doc_efficiency=refined_doc_effectiveness,
-        revision_question_efficiency=revision_question_efficiency,
-    )
-
-    logger.debug(f"\n\n---INITIAL ANSWER ---\n\n Answer:\n Agent: {initial_answer}")
-    logger.debug("-" * 10)
-    logger.debug(f"\n\n---REVISED AGENT ANSWER ---\n\n Answer:\n Agent: {answer}")
-
-    logger.debug("-" * 100)
-
-    if state.initial_agent_stats:
-        initial_doc_boost_factor = state.initial_agent_stats.agent_effectiveness.get(
-            "utilized_chunk_ratio", "--"
-        )
-        initial_support_boost_factor = (
-            state.initial_agent_stats.agent_effectiveness.get("support_ratio", "--")
-        )
-        num_initial_verified_docs = state.initial_agent_stats.original_question.get(
-            "num_verified_documents", "--"
-        )
-        initial_verified_docs_avg_score = (
-            state.initial_agent_stats.original_question.get("verified_avg_score", "--")
-        )
-        initial_sub_questions_verified_docs = (
-            state.initial_agent_stats.sub_questions.get("num_verified_documents", "--")
-        )
-
-        logger.debug("INITIAL AGENT STATS")
-        logger.debug(f"Document Boost Factor: {initial_doc_boost_factor}")
-        logger.debug(f"Support Boost Factor: {initial_support_boost_factor}")
-        logger.debug(f"Originally Verified Docs: {num_initial_verified_docs}")
-        logger.debug(
-            f"Originally Verified Docs Avg Score: {initial_verified_docs_avg_score}"
-        )
-        logger.debug(
-            f"Sub-Questions Verified Docs: {initial_sub_questions_verified_docs}"
-        )
-    if refined_agent_stats:
-        logger.debug("-" * 10)
-        logger.debug("REFINED AGENT STATS")
-        logger.debug(
-            f"Revision Doc Factor: {refined_agent_stats.revision_doc_efficiency}"
-        )
-        logger.debug(
-            f"Revision Question Factor: {refined_agent_stats.revision_question_efficiency}"
-        )
-
-    agent_refined_end_time = datetime.now()
-    if state.agent_refined_start_time:
-        agent_refined_duration = (
-            agent_refined_end_time - state.agent_refined_start_time
-        ).total_seconds()
-    else:
-        agent_refined_duration = None
-
-    agent_refined_metrics = AgentRefinedMetrics(
-        refined_doc_boost_factor=refined_agent_stats.revision_doc_efficiency,
-        refined_question_boost_factor=refined_agent_stats.revision_question_efficiency,
-        duration_s=agent_refined_duration,
-    )
-
-    return RefinedAnswerUpdate(
-        refined_answer=answer,
-        refined_answer_quality=True,  # TODO: replace this with the actual check value
-        refined_agent_stats=refined_agent_stats,
-        agent_refined_end_time=agent_refined_end_time,
-        agent_refined_metrics=agent_refined_metrics,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="main",
-                node_name="generate refined answer",
-                node_start_time=node_start_time,
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/main/nodes/ingest_refined_sub_answers.py

@@ -1,42 +0,0 @@
-from datetime import datetime
-
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    AnswerQuestionOutput,
-)
-from onyx.agents.agent_search.deep_search.main.states import (
-    SubQuestionResultsUpdate,
-)
-from onyx.agents.agent_search.shared_graph_utils.operators import (
-    dedup_inference_sections,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-
-
-def ingest_refined_sub_answers(
-    state: AnswerQuestionOutput,
-) -> SubQuestionResultsUpdate:
-    """
-    LangGraph node to ingest and format the refined sub-answers and retrieved documents.
-    """
-    node_start_time = datetime.now()
-
-    documents = []
-    answer_results = state.answer_results
-    for answer_result in answer_results:
-        documents.extend(answer_result.verified_reranked_documents)
-
-    return SubQuestionResultsUpdate(
-        # Deduping is done by the documents operator for the main graph
-        # so we might not need to dedup here
-        verified_reranked_documents=dedup_inference_sections(documents, []),
-        sub_question_results=answer_results,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="main",
-                node_name="ingest refined answers",
-                node_start_time=node_start_time,
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/main/nodes/persist_agent_results.py

@@ -1,129 +0,0 @@
-from datetime import datetime
-from typing import cast
-
-from langchain_core.runnables import RunnableConfig
-
-from onyx.agents.agent_search.deep_search.main.models import (
-    AgentAdditionalMetrics,
-)
-from onyx.agents.agent_search.deep_search.main.models import AgentTimings
-from onyx.agents.agent_search.deep_search.main.operations import logger
-from onyx.agents.agent_search.deep_search.main.states import MainOutput
-from onyx.agents.agent_search.deep_search.main.states import MainState
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.models import CombinedAgentMetrics
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-from onyx.db.chat import log_agent_metrics
-from onyx.db.chat import log_agent_sub_question_results
-
-
-def persist_agent_results(state: MainState, config: RunnableConfig) -> MainOutput:
-    """
-    LangGraph node to persist the agent results, including agent logging data.
-    """
-    node_start_time = datetime.now()
-
-    agent_start_time = state.agent_start_time
-    agent_base_end_time = state.agent_base_end_time
-    agent_refined_start_time = state.agent_refined_start_time
-    agent_refined_end_time = state.agent_refined_end_time
-    agent_end_time = agent_refined_end_time or agent_base_end_time
-
-    agent_base_duration = None
-    if agent_base_end_time and agent_start_time:
-        agent_base_duration = (agent_base_end_time - agent_start_time).total_seconds()
-
-    agent_refined_duration = None
-    if agent_refined_start_time and agent_refined_end_time:
-        agent_refined_duration = (
-            agent_refined_end_time - agent_refined_start_time
-        ).total_seconds()
-
-    agent_full_duration = None
-    if agent_end_time and agent_start_time:
-        agent_full_duration = (agent_end_time - agent_start_time).total_seconds()
-
-    agent_type = "refined" if agent_refined_duration else "base"
-
-    agent_base_metrics = state.agent_base_metrics
-    agent_refined_metrics = state.agent_refined_metrics
-
-    combined_agent_metrics = CombinedAgentMetrics(
-        timings=AgentTimings(
-            base_duration_s=agent_base_duration,
-            refined_duration_s=agent_refined_duration,
-            full_duration_s=agent_full_duration,
-        ),
-        base_metrics=agent_base_metrics,
-        refined_metrics=agent_refined_metrics,
-        additional_metrics=AgentAdditionalMetrics(),
-    )
-
-    persona_id = None
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    if graph_config.inputs.search_request.persona:
-        persona_id = graph_config.inputs.search_request.persona.id
-
-    user_id = None
-    assert (
-        graph_config.tooling.search_tool
-    ), "search_tool must be provided for agentic search"
-    user = graph_config.tooling.search_tool.user
-    if user:
-        user_id = user.id
-
-    # log the agent metrics
-    if graph_config.persistence:
-        if agent_base_duration is not None:
-            log_agent_metrics(
-                db_session=graph_config.persistence.db_session,
-                user_id=user_id,
-                persona_id=persona_id,
-                agent_type=agent_type,
-                start_time=agent_start_time,
-                agent_metrics=combined_agent_metrics,
-            )
-
-        # Persist the sub-answer in the database
-        db_session = graph_config.persistence.db_session
-        chat_session_id = graph_config.persistence.chat_session_id
-        primary_message_id = graph_config.persistence.message_id
-        sub_question_answer_results = state.sub_question_results
-
-        log_agent_sub_question_results(
-            db_session=db_session,
-            chat_session_id=chat_session_id,
-            primary_message_id=primary_message_id,
-            sub_question_answer_results=sub_question_answer_results,
-        )
-
-    main_output = MainOutput(
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="main",
-                node_name="persist agent results",
-                node_start_time=node_start_time,
-            )
-        ],
-    )
-
-    for log_message in state.log_messages:
-        logger.debug(log_message)
-
-    if state.agent_base_metrics:
-        logger.debug(f"Initial loop: {state.agent_base_metrics.duration_s}")
-    if state.agent_refined_metrics:
-        logger.debug(f"Refined loop: {state.agent_refined_metrics.duration_s}")
-    if (
-        state.agent_base_metrics
-        and state.agent_refined_metrics
-        and state.agent_base_metrics.duration_s
-        and state.agent_refined_metrics.duration_s
-    ):
-        logger.debug(
-            f"Total time: {float(state.agent_base_metrics.duration_s) + float(state.agent_refined_metrics.duration_s)}"
-        )
-
-    return main_output

backend/onyx/agents/agent_search/deep_search/main/nodes/start_agent_search.py

@@ -1,52 +0,0 @@
-from datetime import datetime
-from typing import cast
-
-from langchain_core.runnables import RunnableConfig
-
-from onyx.agents.agent_search.deep_search.main.states import (
-    ExploratorySearchUpdate,
-)
-from onyx.agents.agent_search.deep_search.main.states import MainState
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.agent_prompt_ops import (
-    build_history_prompt,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import retrieve_search_docs
-from onyx.configs.agent_configs import AGENT_EXPLORATORY_SEARCH_RESULTS
-from onyx.context.search.models import InferenceSection
-
-
-def start_agent_search(
-    state: MainState, config: RunnableConfig
-) -> ExploratorySearchUpdate:
-    """
-    LangGraph node to start the agentic search process.
-    """
-    node_start_time = datetime.now()
-
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    question = graph_config.inputs.search_request.query
-
-    history = build_history_prompt(graph_config, question)
-
-    # Initial search to inform decomposition. Just get top 3 fits
-    search_tool = graph_config.tooling.search_tool
-    assert search_tool, "search_tool must be provided for agentic search"
-    retrieved_docs: list[InferenceSection] = retrieve_search_docs(search_tool, question)
-
-    exploratory_search_results = retrieved_docs[:AGENT_EXPLORATORY_SEARCH_RESULTS]
-
-    return ExploratorySearchUpdate(
-        exploratory_search_results=exploratory_search_results,
-        previous_history_summary=history,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="main",
-                node_name="start agent search",
-                node_start_time=node_start_time,
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/main/operations.py

@@ -1,151 +0,0 @@
-from collections.abc import Callable
-
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.shared_graph_utils.models import AgentChunkRetrievalStats
-from onyx.agents.agent_search.shared_graph_utils.models import InitialAgentResultStats
-from onyx.agents.agent_search.shared_graph_utils.models import QueryRetrievalResult
-from onyx.agents.agent_search.shared_graph_utils.models import (
-    SubQuestionAnswerResults,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import write_custom_event
-from onyx.chat.models import StreamStopInfo
-from onyx.chat.models import StreamStopReason
-from onyx.chat.models import StreamType
-from onyx.chat.models import SubQuestionPiece
-from onyx.context.search.models import IndexFilters
-from onyx.tools.models import SearchQueryInfo
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def dispatch_subquestion(
-    level: int, writer: StreamWriter
-) -> Callable[[str, int], None]:
-    def _helper(sub_question_part: str, sep_num: int) -> None:
-        write_custom_event(
-            "decomp_qs",
-            SubQuestionPiece(
-                sub_question=sub_question_part,
-                level=level,
-                level_question_num=sep_num,
-            ),
-            writer,
-        )
-
-    return _helper
-
-
-def dispatch_subquestion_sep(level: int, writer: StreamWriter) -> Callable[[int], None]:
-    def _helper(sep_num: int) -> None:
-        write_custom_event(
-            "stream_finished",
-            StreamStopInfo(
-                stop_reason=StreamStopReason.FINISHED,
-                stream_type=StreamType.SUB_QUESTIONS,
-                level=level,
-                level_question_num=sep_num,
-            ),
-            writer,
-        )
-
-    return _helper
-
-
-def calculate_initial_agent_stats(
-    decomp_answer_results: list[SubQuestionAnswerResults],
-    original_question_stats: AgentChunkRetrievalStats,
-) -> InitialAgentResultStats:
-    initial_agent_result_stats: InitialAgentResultStats = InitialAgentResultStats(
-        sub_questions={},
-        original_question={},
-        agent_effectiveness={},
-    )
-
-    orig_verified = original_question_stats.verified_count
-    orig_support_score = original_question_stats.verified_avg_scores
-
-    verified_document_chunk_ids = []
-    support_scores = 0.0
-
-    for decomp_answer_result in decomp_answer_results:
-        verified_document_chunk_ids += (
-            decomp_answer_result.sub_question_retrieval_stats.verified_doc_chunk_ids
-        )
-        if (
-            decomp_answer_result.sub_question_retrieval_stats.verified_avg_scores
-            is not None
-        ):
-            support_scores += (
-                decomp_answer_result.sub_question_retrieval_stats.verified_avg_scores
-            )
-
-    verified_document_chunk_ids = list(set(verified_document_chunk_ids))
-
-    # Calculate sub-question stats
-    if (
-        verified_document_chunk_ids
-        and len(verified_document_chunk_ids) > 0
-        and support_scores is not None
-    ):
-        sub_question_stats: dict[str, float | int | None] = {
-            "num_verified_documents": len(verified_document_chunk_ids),
-            "verified_avg_score": float(support_scores / len(decomp_answer_results)),
-        }
-    else:
-        sub_question_stats = {"num_verified_documents": 0, "verified_avg_score": None}
-
-    initial_agent_result_stats.sub_questions.update(sub_question_stats)
-
-    # Get original question stats
-    initial_agent_result_stats.original_question.update(
-        {
-            "num_verified_documents": original_question_stats.verified_count,
-            "verified_avg_score": original_question_stats.verified_avg_scores,
-        }
-    )
-
-    # Calculate chunk utilization ratio
-    sub_verified = initial_agent_result_stats.sub_questions["num_verified_documents"]
-
-    chunk_ratio: float | None = None
-    if sub_verified is not None and orig_verified is not None and orig_verified > 0:
-        chunk_ratio = (float(sub_verified) / orig_verified) if sub_verified > 0 else 0.0
-    elif sub_verified is not None and sub_verified > 0:
-        chunk_ratio = 10.0
-
-    initial_agent_result_stats.agent_effectiveness["utilized_chunk_ratio"] = chunk_ratio
-
-    if (
-        orig_support_score is None
-        or orig_support_score == 0.0
-        and initial_agent_result_stats.sub_questions["verified_avg_score"] is None
-    ):
-        initial_agent_result_stats.agent_effectiveness["support_ratio"] = None
-    elif orig_support_score is None or orig_support_score == 0.0:
-        initial_agent_result_stats.agent_effectiveness["support_ratio"] = 10
-    elif initial_agent_result_stats.sub_questions["verified_avg_score"] is None:
-        initial_agent_result_stats.agent_effectiveness["support_ratio"] = 0
-    else:
-        initial_agent_result_stats.agent_effectiveness["support_ratio"] = (
-            initial_agent_result_stats.sub_questions["verified_avg_score"]
-            / orig_support_score
-        )
-
-    return initial_agent_result_stats
-
-
-def get_query_info(results: list[QueryRetrievalResult]) -> SearchQueryInfo:
-    # Use the query info from the base document retrieval
-    # this is used for some fields that are the same across the searches done
-    query_info = None
-    for result in results:
-        if result.query_info is not None:
-            query_info = result.query_info
-            break
-    return query_info or SearchQueryInfo(
-        predicted_search=None,
-        final_filters=IndexFilters(access_control_list=None),
-        recency_bias_multiplier=1.0,
-    )

backend/onyx/agents/agent_search/deep_search/main/states.py

@@ -1,172 +0,0 @@
-from datetime import datetime
-from operator import add
-from typing import Annotated
-from typing import TypedDict
-
-from pydantic import BaseModel
-
-from onyx.agents.agent_search.core_state import CoreState
-from onyx.agents.agent_search.deep_search.main.models import AgentBaseMetrics
-from onyx.agents.agent_search.deep_search.main.models import (
-    AgentRefinedMetrics,
-)
-from onyx.agents.agent_search.deep_search.main.models import (
-    RefinementSubQuestion,
-)
-from onyx.agents.agent_search.orchestration.states import ToolCallUpdate
-from onyx.agents.agent_search.orchestration.states import ToolChoiceInput
-from onyx.agents.agent_search.orchestration.states import ToolChoiceUpdate
-from onyx.agents.agent_search.shared_graph_utils.models import AgentChunkRetrievalStats
-from onyx.agents.agent_search.shared_graph_utils.models import (
-    EntityRelationshipTermExtraction,
-)
-from onyx.agents.agent_search.shared_graph_utils.models import InitialAgentResultStats
-from onyx.agents.agent_search.shared_graph_utils.models import QueryRetrievalResult
-from onyx.agents.agent_search.shared_graph_utils.models import RefinedAgentStats
-from onyx.agents.agent_search.shared_graph_utils.models import (
-    SubQuestionAnswerResults,
-)
-from onyx.agents.agent_search.shared_graph_utils.operators import (
-    dedup_inference_sections,
-)
-from onyx.agents.agent_search.shared_graph_utils.operators import (
-    dedup_question_answer_results,
-)
-from onyx.context.search.models import InferenceSection
-
-
-### States ###
-class LoggerUpdate(BaseModel):
-    log_messages: Annotated[list[str], add] = []
-
-
-class RefinedAgentStartStats(BaseModel):
-    agent_refined_start_time: datetime | None = None
-
-
-class RefinedAgentEndStats(BaseModel):
-    agent_refined_end_time: datetime | None = None
-    agent_refined_metrics: AgentRefinedMetrics = AgentRefinedMetrics()
-
-
-class InitialQuestionDecompositionUpdate(
-    RefinedAgentStartStats, RefinedAgentEndStats, LoggerUpdate
-):
-    agent_start_time: datetime | None = None
-    previous_history: str | None = None
-    initial_sub_questions: list[str] = []
-
-
-class ExploratorySearchUpdate(LoggerUpdate):
-    exploratory_search_results: list[InferenceSection] = []
-    previous_history_summary: str | None = None
-
-
-class InitialRefinedAnswerComparisonUpdate(LoggerUpdate):
-    """
-    Evaluation of whether the refined answer is better than the initial answer
-    """
-
-    refined_answer_improvement_eval: bool = False
-
-
-class InitialAnswerUpdate(LoggerUpdate):
-    """
-    Initial answer information
-    """
-
-    initial_answer: str | None = None
-    initial_agent_stats: InitialAgentResultStats | None = None
-    generated_sub_questions: list[str] = []
-    agent_base_end_time: datetime | None = None
-    agent_base_metrics: AgentBaseMetrics | None = None
-
-
-class RefinedAnswerUpdate(RefinedAgentEndStats, LoggerUpdate):
-    """
-    Refined answer information
-    """
-
-    refined_answer: str | None = None
-    refined_agent_stats: RefinedAgentStats | None = None
-    refined_answer_quality: bool = False
-
-
-class InitialAnswerQualityUpdate(LoggerUpdate):
-    """
-    Initial answer quality evaluation
-    """
-
-    initial_answer_quality_eval: bool = False
-
-
-class RequireRefinemenEvalUpdate(LoggerUpdate):
-    require_refined_answer_eval: bool = True
-
-
-class SubQuestionResultsUpdate(LoggerUpdate):
-    verified_reranked_documents: Annotated[
-        list[InferenceSection], dedup_inference_sections
-    ] = []
-    context_documents: Annotated[list[InferenceSection], dedup_inference_sections] = []
-    cited_documents: Annotated[
-        list[InferenceSection], dedup_inference_sections
-    ] = []  # cited docs from sub-answers are used for answer context
-    sub_question_results: Annotated[
-        list[SubQuestionAnswerResults], dedup_question_answer_results
-    ] = []
-
-
-class OrigQuestionRetrievalUpdate(LoggerUpdate):
-    orig_question_retrieved_documents: Annotated[
-        list[InferenceSection], dedup_inference_sections
-    ]
-    orig_question_verified_reranked_documents: Annotated[
-        list[InferenceSection], dedup_inference_sections
-    ]
-    orig_question_sub_query_retrieval_results: list[QueryRetrievalResult] = []
-    orig_question_retrieval_stats: AgentChunkRetrievalStats = AgentChunkRetrievalStats()
-
-
-class EntityTermExtractionUpdate(LoggerUpdate):
-    entity_relation_term_extractions: EntityRelationshipTermExtraction = (
-        EntityRelationshipTermExtraction()
-    )
-
-
-class RefinedQuestionDecompositionUpdate(RefinedAgentStartStats, LoggerUpdate):
-    refined_sub_questions: dict[int, RefinementSubQuestion] = {}
-
-
-## Graph Input State
-class MainInput(CoreState):
-    pass
-
-
-## Graph State
-class MainState(
-    # This includes the core state
-    MainInput,
-    ToolChoiceInput,
-    ToolCallUpdate,
-    ToolChoiceUpdate,
-    InitialQuestionDecompositionUpdate,
-    InitialAnswerUpdate,
-    SubQuestionResultsUpdate,
-    OrigQuestionRetrievalUpdate,
-    EntityTermExtractionUpdate,
-    InitialAnswerQualityUpdate,
-    RequireRefinemenEvalUpdate,
-    RefinedQuestionDecompositionUpdate,
-    RefinedAnswerUpdate,
-    RefinedAgentStartStats,
-    RefinedAgentEndStats,
-    InitialRefinedAnswerComparisonUpdate,
-    ExploratorySearchUpdate,
-):
-    pass
-
-
-## Graph Output State - presently not used
-class MainOutput(TypedDict):
-    log_messages: list[str]

backend/onyx/agents/agent_search/deep_search/refinement/consolidate_sub_answers/edges.py

@@ -1,33 +0,0 @@
-from collections.abc import Hashable
-from datetime import datetime
-
-from langgraph.types import Send
-
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    SubQuestionAnsweringInput,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalInput,
-)
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def send_to_expanded_refined_retrieval(
-    state: SubQuestionAnsweringInput,
-) -> Send | Hashable:
-    """
-    LangGraph edge to sends a refined sub-question extended retrieval.
-    """
-    logger.debug("sending to expanded retrieval for follow up question via edge")
-    datetime.now()
-    return Send(
-        "refined_sub_question_expanded_retrieval",
-        ExpandedRetrievalInput(
-            question=state.question,
-            sub_question_id=state.question_id,
-            base_search=False,
-            log_messages=[f"{datetime.now()} -- Sending to expanded retrieval"],
-        ),
-    )

backend/onyx/agents/agent_search/deep_search/refinement/consolidate_sub_answers/graph_builder.py

@@ -1,132 +0,0 @@
-from langgraph.graph import END
-from langgraph.graph import START
-from langgraph.graph import StateGraph
-
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.nodes.check_sub_answer import (
-    check_sub_answer,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.nodes.format_sub_answer import (
-    format_sub_answer,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.nodes.generate_sub_answer import (
-    generate_sub_answer,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.nodes.ingest_retrieved_documents import (
-    ingest_retrieved_documents,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    AnswerQuestionOutput,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    AnswerQuestionState,
-)
-from onyx.agents.agent_search.deep_search.initial.generate_individual_sub_answer.states import (
-    SubQuestionAnsweringInput,
-)
-from onyx.agents.agent_search.deep_search.refinement.consolidate_sub_answers.edges import (
-    send_to_expanded_refined_retrieval,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.graph_builder import (
-    expanded_retrieval_graph_builder,
-)
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def answer_refined_query_graph_builder() -> StateGraph:
-    """
-    LangGraph graph builder for the refined sub-answer generation process.
-    """
-    graph = StateGraph(
-        state_schema=AnswerQuestionState,
-        input=SubQuestionAnsweringInput,
-        output=AnswerQuestionOutput,
-    )
-
-    ### Add nodes ###
-
-    # Subgraph for the expanded retrieval process
-    expanded_retrieval = expanded_retrieval_graph_builder().compile()
-    graph.add_node(
-        node="refined_sub_question_expanded_retrieval",
-        action=expanded_retrieval,
-    )
-
-    # Ingest the retrieved documents
-    graph.add_node(
-        node="ingest_refined_retrieval",
-        action=ingest_retrieved_documents,
-    )
-
-    # Generate the refined sub-answer
-    graph.add_node(
-        node="generate_refined_sub_answer",
-        action=generate_sub_answer,
-    )
-
-    # Check if the refined sub-answer is correct
-    graph.add_node(
-        node="refined_sub_answer_check",
-        action=check_sub_answer,
-    )
-
-    # Format the refined sub-answer
-    graph.add_node(
-        node="format_refined_sub_answer",
-        action=format_sub_answer,
-    )
-
-    ### Add edges ###
-
-    graph.add_conditional_edges(
-        source=START,
-        path=send_to_expanded_refined_retrieval,
-        path_map=["refined_sub_question_expanded_retrieval"],
-    )
-    graph.add_edge(
-        start_key="refined_sub_question_expanded_retrieval",
-        end_key="ingest_refined_retrieval",
-    )
-    graph.add_edge(
-        start_key="ingest_refined_retrieval",
-        end_key="generate_refined_sub_answer",
-    )
-    graph.add_edge(
-        start_key="generate_refined_sub_answer",
-        end_key="refined_sub_answer_check",
-    )
-    graph.add_edge(
-        start_key="refined_sub_answer_check",
-        end_key="format_refined_sub_answer",
-    )
-    graph.add_edge(
-        start_key="format_refined_sub_answer",
-        end_key=END,
-    )
-
-    return graph
-
-
-if __name__ == "__main__":
-    from onyx.db.engine import get_session_context_manager
-    from onyx.llm.factory import get_default_llms
-    from onyx.context.search.models import SearchRequest
-
-    graph = answer_refined_query_graph_builder()
-    compiled_graph = graph.compile()
-    primary_llm, fast_llm = get_default_llms()
-    search_request = SearchRequest(
-        query="what can you do with onyx or danswer?",
-    )
-    with get_session_context_manager() as db_session:
-        inputs = SubQuestionAnsweringInput(
-            question="what can you do with onyx?",
-            question_id="0_0",
-            log_messages=[],
-        )
-        for thing in compiled_graph.stream(
-            input=inputs,
-            stream_mode="custom",
-        ):
-            logger.debug(thing)

backend/onyx/agents/agent_search/deep_search/shared/expanded_retrieval/edges.py

@@ -1,42 +0,0 @@
-from collections.abc import Hashable
-from typing import cast
-
-from langchain_core.runnables.config import RunnableConfig
-from langgraph.types import Send
-
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalState,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    RetrievalInput,
-)
-from onyx.agents.agent_search.models import GraphConfig
-
-
-def parallel_retrieval_edge(
-    state: ExpandedRetrievalState, config: RunnableConfig
-) -> list[Send | Hashable]:
-    """
-    LangGraph edge to parallelize the retrieval process for each of the
-    generated sub-queries and the original question.
-    """
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    question = (
-        state.question if state.question else graph_config.inputs.search_request.query
-    )
-
-    query_expansions = state.expanded_queries + [question]
-
-    return [
-        Send(
-            "retrieve_documents",
-            RetrievalInput(
-                query_to_retrieve=query,
-                question=question,
-                base_search=False,
-                sub_question_id=state.sub_question_id,
-                log_messages=[],
-            ),
-        )
-        for query in query_expansions
-    ]

backend/onyx/agents/agent_search/deep_search/shared/expanded_retrieval/graph_builder.py

@@ -1,161 +0,0 @@
-from langgraph.graph import END
-from langgraph.graph import START
-from langgraph.graph import StateGraph
-
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.edges import (
-    parallel_retrieval_edge,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.nodes.expand_queries import (
-    expand_queries,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.nodes.format_queries import (
-    format_queries,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.nodes.format_results import (
-    format_results,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.nodes.kickoff_verification import (
-    kickoff_verification,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.nodes.rerank_documents import (
-    rerank_documents,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.nodes.retrieve_documents import (
-    retrieve_documents,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.nodes.verify_documents import (
-    verify_documents,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalInput,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalOutput,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalState,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import get_test_config
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def expanded_retrieval_graph_builder() -> StateGraph:
-    """
-    LangGraph graph builder for the expanded retrieval process.
-    """
-    graph = StateGraph(
-        state_schema=ExpandedRetrievalState,
-        input=ExpandedRetrievalInput,
-        output=ExpandedRetrievalOutput,
-    )
-
-    ### Add nodes ###
-
-    # Convert the question into multiple sub-queries
-    graph.add_node(
-        node="expand_queries",
-        action=expand_queries,
-    )
-
-    # Format the sub-queries into a list of strings
-    graph.add_node(
-        node="format_queries",
-        action=format_queries,
-    )
-
-    # Retrieve the documents for each sub-query
-    graph.add_node(
-        node="retrieve_documents",
-        action=retrieve_documents,
-    )
-
-    # Start verification process that the documents are relevant to the question (not the query)
-    graph.add_node(
-        node="kickoff_verification",
-        action=kickoff_verification,
-    )
-
-    # Verify that a given document is relevant to the question (not the query)
-    graph.add_node(
-        node="verify_documents",
-        action=verify_documents,
-    )
-
-    # Rerank the documents that have been verified
-    graph.add_node(
-        node="rerank_documents",
-        action=rerank_documents,
-    )
-
-    # Format the results into a list of strings
-    graph.add_node(
-        node="format_results",
-        action=format_results,
-    )
-
-    ### Add edges ###
-    graph.add_edge(
-        start_key=START,
-        end_key="expand_queries",
-    )
-    graph.add_edge(
-        start_key="expand_queries",
-        end_key="format_queries",
-    )
-
-    graph.add_conditional_edges(
-        source="format_queries",
-        path=parallel_retrieval_edge,
-        path_map=["retrieve_documents"],
-    )
-    graph.add_edge(
-        start_key="retrieve_documents",
-        end_key="kickoff_verification",
-    )
-    graph.add_edge(
-        start_key="verify_documents",
-        end_key="rerank_documents",
-    )
-    graph.add_edge(
-        start_key="rerank_documents",
-        end_key="format_results",
-    )
-    graph.add_edge(
-        start_key="format_results",
-        end_key=END,
-    )
-
-    return graph
-
-
-if __name__ == "__main__":
-    from onyx.db.engine import get_session_context_manager
-    from onyx.llm.factory import get_default_llms
-    from onyx.context.search.models import SearchRequest
-
-    graph = expanded_retrieval_graph_builder()
-    compiled_graph = graph.compile()
-    primary_llm, fast_llm = get_default_llms()
-    search_request = SearchRequest(
-        query="what can you do with onyx or danswer?",
-    )
-
-    with get_session_context_manager() as db_session:
-        graph_config, search_tool = get_test_config(
-            db_session, primary_llm, fast_llm, search_request
-        )
-        inputs = ExpandedRetrievalInput(
-            question="what can you do with onyx?",
-            base_search=False,
-            sub_question_id=None,
-            log_messages=[],
-        )
-        for thing in compiled_graph.stream(
-            input=inputs,
-            config={"configurable": {"config": graph_config}},
-            stream_mode="custom",
-            subgraphs=True,
-        ):
-            logger.debug(thing)

backend/onyx/agents/agent_search/deep_search/shared/expanded_retrieval/models.py

@@ -1,13 +0,0 @@
-from pydantic import BaseModel
-
-from onyx.agents.agent_search.shared_graph_utils.models import AgentChunkRetrievalStats
-from onyx.agents.agent_search.shared_graph_utils.models import QueryRetrievalResult
-from onyx.context.search.models import InferenceSection
-
-
-class QuestionRetrievalResult(BaseModel):
-    expanded_query_results: list[QueryRetrievalResult] = []
-    retrieved_documents: list[InferenceSection] = []
-    verified_reranked_documents: list[InferenceSection] = []
-    context_documents: list[InferenceSection] = []
-    retrieval_stats: AgentChunkRetrievalStats = AgentChunkRetrievalStats()

backend/onyx/agents/agent_search/deep_search/shared/expanded_retrieval/nodes/expand_queries.py

@@ -1,75 +0,0 @@
-from datetime import datetime
-from typing import cast
-
-from langchain_core.messages import HumanMessage
-from langchain_core.messages import merge_message_runs
-from langchain_core.runnables.config import RunnableConfig
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.operations import (
-    dispatch_subquery,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalInput,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    QueryExpansionUpdate,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.utils import dispatch_separated
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import parse_question_id
-from onyx.prompts.agent_search import (
-    QUERY_REWRITING_PROMPT,
-)
-
-
-def expand_queries(
-    state: ExpandedRetrievalInput,
-    config: RunnableConfig,
-    writer: StreamWriter = lambda _: None,
-) -> QueryExpansionUpdate:
-    """
-    LangGraph node to expand a question into multiple search queries.
-    """
-    # Sometimes we want to expand the original question, sometimes we want to expand a sub-question.
-    # When we are running this node on the original question, no question is explictly passed in.
-    # Instead, we use the original question from the search request.
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    node_start_time = datetime.now()
-    question = state.question
-
-    llm = graph_config.tooling.fast_llm
-    sub_question_id = state.sub_question_id
-    if sub_question_id is None:
-        level, question_num = 0, 0
-    else:
-        level, question_num = parse_question_id(sub_question_id)
-
-    msg = [
-        HumanMessage(
-            content=QUERY_REWRITING_PROMPT.format(question=question),
-        )
-    ]
-
-    llm_response_list = dispatch_separated(
-        llm.stream(prompt=msg), dispatch_subquery(level, question_num, writer)
-    )
-
-    llm_response = merge_message_runs(llm_response_list, chunk_separator="")[0].content
-
-    rewritten_queries = llm_response.split("\n")
-
-    return QueryExpansionUpdate(
-        expanded_queries=rewritten_queries,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="shared - expanded retrieval",
-                node_name="expand queries",
-                node_start_time=node_start_time,
-                result=f"Number of expanded queries: {len(rewritten_queries)}",
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/shared/expanded_retrieval/nodes/format_queries.py

@@ -1,19 +0,0 @@
-from langchain_core.runnables.config import RunnableConfig
-
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalState,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    QueryExpansionUpdate,
-)
-
-
-def format_queries(
-    state: ExpandedRetrievalState, config: RunnableConfig
-) -> QueryExpansionUpdate:
-    """
-    LangGraph node to format the expanded queries into a list of strings.
-    """
-    return QueryExpansionUpdate(
-        expanded_queries=state.expanded_queries,
-    )

backend/onyx/agents/agent_search/deep_search/shared/expanded_retrieval/nodes/format_results.py

@@ -1,91 +0,0 @@
-from typing import cast
-
-from langchain_core.runnables.config import RunnableConfig
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.deep_search.main.operations import get_query_info
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.models import (
-    QuestionRetrievalResult,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.operations import (
-    calculate_sub_question_retrieval_stats,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalState,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalUpdate,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.models import AgentChunkRetrievalStats
-from onyx.agents.agent_search.shared_graph_utils.utils import parse_question_id
-from onyx.agents.agent_search.shared_graph_utils.utils import relevance_from_docs
-from onyx.agents.agent_search.shared_graph_utils.utils import write_custom_event
-from onyx.chat.models import ExtendedToolResponse
-from onyx.tools.tool_implementations.search.search_tool import yield_search_responses
-
-
-def format_results(
-    state: ExpandedRetrievalState,
-    config: RunnableConfig,
-    writer: StreamWriter = lambda _: None,
-) -> ExpandedRetrievalUpdate:
-    """
-    LangGraph node that constructs the proper expanded retrieval format.
-    """
-    level, question_num = parse_question_id(state.sub_question_id or "0_0")
-    query_info = get_query_info(state.query_retrieval_results)
-
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-
-    # Main question docs will be sent later after aggregation and deduping with sub-question docs
-    reranked_documents = state.reranked_documents
-
-    if not (level == 0 and question_num == 0):
-        if len(reranked_documents) == 0:
-            # The sub-question is used as the last query. If no verified documents are found, stream
-            # the top 3 for that one. We may want to revisit this.
-            reranked_documents = state.query_retrieval_results[-1].retrieved_documents[
-                :3
-            ]
-
-        assert (
-            graph_config.tooling.search_tool
-        ), "search_tool must be provided for agentic search"
-
-        relevance_list = relevance_from_docs(reranked_documents)
-        for tool_response in yield_search_responses(
-            query=state.question,
-            reranked_sections=state.retrieved_documents,
-            final_context_sections=reranked_documents,
-            search_query_info=query_info,
-            get_section_relevance=lambda: relevance_list,
-            search_tool=graph_config.tooling.search_tool,
-        ):
-            write_custom_event(
-                "tool_response",
-                ExtendedToolResponse(
-                    id=tool_response.id,
-                    response=tool_response.response,
-                    level=level,
-                    level_question_num=question_num,
-                ),
-                writer,
-            )
-    sub_question_retrieval_stats = calculate_sub_question_retrieval_stats(
-        verified_documents=state.verified_documents,
-        expanded_retrieval_results=state.query_retrieval_results,
-    )
-
-    if sub_question_retrieval_stats is None:
-        sub_question_retrieval_stats = AgentChunkRetrievalStats()
-
-    return ExpandedRetrievalUpdate(
-        expanded_retrieval_result=QuestionRetrievalResult(
-            expanded_query_results=state.query_retrieval_results,
-            retrieved_documents=state.retrieved_documents,
-            verified_reranked_documents=reranked_documents,
-            context_documents=state.reranked_documents,
-            retrieval_stats=sub_question_retrieval_stats,
-        ),
-    )

backend/onyx/agents/agent_search/deep_search/shared/expanded_retrieval/nodes/kickoff_verification.py

@@ -1,44 +0,0 @@
-from typing import Literal
-
-from langchain_core.runnables.config import RunnableConfig
-from langgraph.types import Command
-from langgraph.types import Send
-
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    DocVerificationInput,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalState,
-)
-
-
-def kickoff_verification(
-    state: ExpandedRetrievalState,
-    config: RunnableConfig,
-) -> Command[Literal["verify_documents"]]:
-    """
-    LangGraph node (Command node!) that kicks off the verification process for the retrieved documents.
-    Note that this is a Command node and does the routing as well. (At present, no state updates
-    are done here, so this could be replaced with an edge. But we may choose to make state
-    updates later.)
-    """
-    retrieved_documents = state.retrieved_documents
-    verification_question = state.question
-
-    sub_question_id = state.sub_question_id
-    return Command(
-        update={},
-        goto=[
-            Send(
-                node="verify_documents",
-                arg=DocVerificationInput(
-                    retrieved_document_to_verify=document,
-                    question=verification_question,
-                    base_search=False,
-                    sub_question_id=sub_question_id,
-                    log_messages=[],
-                ),
-            )
-            for document in retrieved_documents
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/shared/expanded_retrieval/nodes/rerank_documents.py

@@ -1,105 +0,0 @@
-from datetime import datetime
-from typing import cast
-
-from langchain_core.runnables.config import RunnableConfig
-
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.operations import (
-    logger,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    DocRerankingUpdate,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    ExpandedRetrievalState,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.calculations import get_fit_scores
-from onyx.agents.agent_search.shared_graph_utils.models import RetrievalFitStats
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-from onyx.configs.agent_configs import AGENT_RERANKING_MAX_QUERY_RETRIEVAL_RESULTS
-from onyx.configs.agent_configs import AGENT_RERANKING_STATS
-from onyx.context.search.models import InferenceSection
-from onyx.context.search.models import SearchRequest
-from onyx.context.search.pipeline import retrieval_preprocessing
-from onyx.context.search.postprocessing.postprocessing import rerank_sections
-from onyx.db.engine import get_session_context_manager
-
-
-def rerank_documents(
-    state: ExpandedRetrievalState, config: RunnableConfig
-) -> DocRerankingUpdate:
-    """
-    LangGraph node to rerank the retrieved and verified documents. A part of the
-    pre-existing pipeline is used here.
-    """
-    node_start_time = datetime.now()
-    verified_documents = state.verified_documents
-
-    # Rerank post retrieval and verification. First, create a search query
-    # then create the list of reranked sections
-
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    question = (
-        state.question if state.question else graph_config.inputs.search_request.query
-    )
-    assert (
-        graph_config.tooling.search_tool
-    ), "search_tool must be provided for agentic search"
-    with get_session_context_manager() as db_session:
-        # we ignore some of the user specified fields since this search is
-        # internal to agentic search, but we still want to pass through
-        # persona (for stuff like document sets) and rerank settings
-        # (to not make an unnecessary db call).
-        search_request = SearchRequest(
-            query=question,
-            persona=graph_config.inputs.search_request.persona,
-            rerank_settings=graph_config.inputs.search_request.rerank_settings,
-        )
-        _search_query = retrieval_preprocessing(
-            search_request=search_request,
-            user=graph_config.tooling.search_tool.user,  # bit of a hack
-            llm=graph_config.tooling.fast_llm,
-            db_session=db_session,
-        )
-
-    # skip section filtering
-
-    if (
-        _search_query.rerank_settings
-        and _search_query.rerank_settings.rerank_model_name
-        and _search_query.rerank_settings.num_rerank > 0
-        and len(verified_documents) > 0
-    ):
-        if len(verified_documents) > 1:
-            reranked_documents = rerank_sections(
-                _search_query,
-                verified_documents,
-            )
-        else:
-            num = "No" if len(verified_documents) == 0 else "One"
-            logger.warning(f"{num} verified document(s) found, skipping reranking")
-            reranked_documents = verified_documents
-    else:
-        logger.warning("No reranking settings found, using unranked documents")
-        reranked_documents = verified_documents
-
-    if AGENT_RERANKING_STATS:
-        fit_scores = get_fit_scores(verified_documents, reranked_documents)
-    else:
-        fit_scores = RetrievalFitStats(fit_score_lift=0, rerank_effect=0, fit_scores={})
-
-    return DocRerankingUpdate(
-        reranked_documents=[
-            doc for doc in reranked_documents if type(doc) == InferenceSection
-        ][:AGENT_RERANKING_MAX_QUERY_RETRIEVAL_RESULTS],
-        sub_question_retrieval_stats=fit_scores,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="shared - expanded retrieval",
-                node_name="rerank documents",
-                node_start_time=node_start_time,
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/shared/expanded_retrieval/nodes/retrieve_documents.py

@@ -1,113 +0,0 @@
-from datetime import datetime
-from typing import cast
-
-from langchain_core.runnables.config import RunnableConfig
-
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.operations import (
-    logger,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    DocRetrievalUpdate,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    RetrievalInput,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.calculations import get_fit_scores
-from onyx.agents.agent_search.shared_graph_utils.models import QueryRetrievalResult
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_langgraph_node_log_string,
-)
-from onyx.configs.agent_configs import AGENT_MAX_QUERY_RETRIEVAL_RESULTS
-from onyx.configs.agent_configs import AGENT_RETRIEVAL_STATS
-from onyx.context.search.models import InferenceSection
-from onyx.db.engine import get_session_context_manager
-from onyx.tools.models import SearchQueryInfo
-from onyx.tools.tool_implementations.search.search_tool import (
-    SEARCH_RESPONSE_SUMMARY_ID,
-)
-from onyx.tools.tool_implementations.search.search_tool import SearchResponseSummary
-
-
-def retrieve_documents(
-    state: RetrievalInput, config: RunnableConfig
-) -> DocRetrievalUpdate:
-    """
-    LangGraph node to retrieve documents from the search tool.
-    """
-    node_start_time = datetime.now()
-    query_to_retrieve = state.query_to_retrieve
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    search_tool = graph_config.tooling.search_tool
-
-    retrieved_docs: list[InferenceSection] = []
-    if not query_to_retrieve.strip():
-        logger.warning("Empty query, skipping retrieval")
-
-        return DocRetrievalUpdate(
-            query_retrieval_results=[],
-            retrieved_documents=[],
-            log_messages=[
-                get_langgraph_node_log_string(
-                    graph_component="shared - expanded retrieval",
-                    node_name="retrieve documents",
-                    node_start_time=node_start_time,
-                    result="Empty query, skipping retrieval",
-                )
-            ],
-        )
-
-    query_info = None
-    if search_tool is None:
-        raise ValueError("search_tool must be provided for agentic search")
-
-    callback_container: list[list[InferenceSection]] = []
-
-    # new db session to avoid concurrency issues
-    with get_session_context_manager() as db_session:
-        for tool_response in search_tool.run(
-            query=query_to_retrieve,
-            force_no_rerank=True,
-            alternate_db_session=db_session,
-            retrieved_sections_callback=callback_container.append,
-        ):
-            # get retrieved docs to send to the rest of the graph
-            if tool_response.id == SEARCH_RESPONSE_SUMMARY_ID:
-                response = cast(SearchResponseSummary, tool_response.response)
-                retrieved_docs = response.top_sections
-                query_info = SearchQueryInfo(
-                    predicted_search=response.predicted_search,
-                    final_filters=response.final_filters,
-                    recency_bias_multiplier=response.recency_bias_multiplier,
-                )
-                break
-
-    retrieved_docs = retrieved_docs[:AGENT_MAX_QUERY_RETRIEVAL_RESULTS]
-
-    if AGENT_RETRIEVAL_STATS:
-        pre_rerank_docs = callback_container[0]
-        fit_scores = get_fit_scores(
-            pre_rerank_docs,
-            retrieved_docs,
-        )
-    else:
-        fit_scores = None
-
-    expanded_retrieval_result = QueryRetrievalResult(
-        query=query_to_retrieve,
-        retrieved_documents=retrieved_docs,
-        stats=fit_scores,
-        query_info=query_info,
-    )
-
-    return DocRetrievalUpdate(
-        query_retrieval_results=[expanded_retrieval_result],
-        retrieved_documents=retrieved_docs,
-        log_messages=[
-            get_langgraph_node_log_string(
-                graph_component="shared - expanded retrieval",
-                node_name="retrieve documents",
-                node_start_time=node_start_time,
-            )
-        ],
-    )

backend/onyx/agents/agent_search/deep_search/shared/expanded_retrieval/nodes/verify_documents.py

@@ -1,62 +0,0 @@
-from typing import cast
-
-from langchain_core.messages import HumanMessage
-from langchain_core.runnables.config import RunnableConfig
-
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    DocVerificationInput,
-)
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.states import (
-    DocVerificationUpdate,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.agent_prompt_ops import (
-    trim_prompt_piece,
-)
-from onyx.prompts.agent_search import (
-    DOCUMENT_VERIFICATION_PROMPT,
-)
-
-
-def verify_documents(
-    state: DocVerificationInput, config: RunnableConfig
-) -> DocVerificationUpdate:
-    """
-    LangGraph node to check whether the document is relevant for the original user question
-
-    Args:
-        state (DocVerificationInput): The current state
-        config (RunnableConfig): Configuration containing ProSearchConfig
-
-    Updates:
-        verified_documents: list[InferenceSection]
-    """
-
-    question = state.question
-    retrieved_document_to_verify = state.retrieved_document_to_verify
-    document_content = retrieved_document_to_verify.combined_content
-
-    graph_config = cast(GraphConfig, config["metadata"]["config"])
-    fast_llm = graph_config.tooling.fast_llm
-
-    document_content = trim_prompt_piece(
-        fast_llm.config, document_content, DOCUMENT_VERIFICATION_PROMPT + question
-    )
-
-    msg = [
-        HumanMessage(
-            content=DOCUMENT_VERIFICATION_PROMPT.format(
-                question=question, document_content=document_content
-            )
-        )
-    ]
-
-    response = fast_llm.invoke(msg)
-
-    verified_documents = []
-    if isinstance(response.content, str) and "yes" in response.content.lower():
-        verified_documents.append(retrieved_document_to_verify)
-
-    return DocVerificationUpdate(
-        verified_documents=verified_documents,
-    )

backend/onyx/agents/agent_search/deep_search/shared/expanded_retrieval/operations.py

@@ -1,93 +0,0 @@
-from collections import defaultdict
-from collections.abc import Callable
-
-import numpy as np
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.shared_graph_utils.models import AgentChunkRetrievalStats
-from onyx.agents.agent_search.shared_graph_utils.models import QueryRetrievalResult
-from onyx.agents.agent_search.shared_graph_utils.utils import write_custom_event
-from onyx.chat.models import SubQueryPiece
-from onyx.context.search.models import InferenceSection
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def dispatch_subquery(
-    level: int, question_num: int, writer: StreamWriter
-) -> Callable[[str, int], None]:
-    def helper(token: str, num: int) -> None:
-        write_custom_event(
-            "subqueries",
-            SubQueryPiece(
-                sub_query=token,
-                level=level,
-                level_question_num=question_num,
-                query_id=num,
-            ),
-            writer,
-        )
-
-    return helper
-
-
-def calculate_sub_question_retrieval_stats(
-    verified_documents: list[InferenceSection],
-    expanded_retrieval_results: list[QueryRetrievalResult],
-) -> AgentChunkRetrievalStats:
-    chunk_scores: dict[str, dict[str, list[int | float]]] = defaultdict(
-        lambda: defaultdict(list)
-    )
-
-    for expanded_retrieval_result in expanded_retrieval_results:
-        for doc in expanded_retrieval_result.retrieved_documents:
-            doc_chunk_id = f"{doc.center_chunk.document_id}_{doc.center_chunk.chunk_id}"
-            if doc.center_chunk.score is not None:
-                chunk_scores[doc_chunk_id]["score"].append(doc.center_chunk.score)
-
-    verified_doc_chunk_ids = [
-        f"{verified_document.center_chunk.document_id}_{verified_document.center_chunk.chunk_id}"
-        for verified_document in verified_documents
-    ]
-    dismissed_doc_chunk_ids = []
-
-    raw_chunk_stats_counts: dict[str, int] = defaultdict(int)
-    raw_chunk_stats_scores: dict[str, float] = defaultdict(float)
-    for doc_chunk_id, chunk_data in chunk_scores.items():
-        valid_chunk_scores = [
-            score for score in chunk_data["score"] if score is not None
-        ]
-        key = "verified" if doc_chunk_id in verified_doc_chunk_ids else "rejected"
-        raw_chunk_stats_counts[f"{key}_count"] += 1
-
-        raw_chunk_stats_scores[f"{key}_scores"] += float(np.mean(valid_chunk_scores))
-
-        if key == "rejected":
-            dismissed_doc_chunk_ids.append(doc_chunk_id)
-
-    if raw_chunk_stats_counts["verified_count"] == 0:
-        verified_avg_scores = 0.0
-    else:
-        verified_avg_scores = raw_chunk_stats_scores["verified_scores"] / float(
-            raw_chunk_stats_counts["verified_count"]
-        )
-
-    rejected_scores = raw_chunk_stats_scores.get("rejected_scores")
-    if rejected_scores is not None:
-        rejected_avg_scores = rejected_scores / float(
-            raw_chunk_stats_counts["rejected_count"]
-        )
-    else:
-        rejected_avg_scores = None
-
-    chunk_stats = AgentChunkRetrievalStats(
-        verified_count=raw_chunk_stats_counts["verified_count"],
-        verified_avg_scores=verified_avg_scores,
-        rejected_count=raw_chunk_stats_counts["rejected_count"],
-        rejected_avg_scores=rejected_avg_scores,
-        verified_doc_chunk_ids=verified_doc_chunk_ids,
-        dismissed_doc_chunk_ids=dismissed_doc_chunk_ids,
-    )
-
-    return chunk_stats

backend/onyx/agents/agent_search/deep_search/shared/expanded_retrieval/states.py

@@ -1,91 +0,0 @@
-from operator import add
-from typing import Annotated
-
-from pydantic import BaseModel
-
-from onyx.agents.agent_search.core_state import SubgraphCoreState
-from onyx.agents.agent_search.deep_search.main.states import LoggerUpdate
-from onyx.agents.agent_search.deep_search.shared.expanded_retrieval.models import (
-    QuestionRetrievalResult,
-)
-from onyx.agents.agent_search.shared_graph_utils.models import QueryRetrievalResult
-from onyx.agents.agent_search.shared_graph_utils.models import RetrievalFitStats
-from onyx.agents.agent_search.shared_graph_utils.operators import (
-    dedup_inference_sections,
-)
-from onyx.context.search.models import InferenceSection
-
-### States ###
-
-## Graph Input State
-
-
-class ExpandedRetrievalInput(SubgraphCoreState):
-    question: str = ""
-    base_search: bool = False
-    sub_question_id: str | None = None
-
-
-## Update/Return States
-
-
-class QueryExpansionUpdate(LoggerUpdate, BaseModel):
-    expanded_queries: list[str] = []
-    log_messages: list[str] = []
-
-
-class DocVerificationUpdate(BaseModel):
-    verified_documents: Annotated[list[InferenceSection], dedup_inference_sections] = []
-
-
-class DocRetrievalUpdate(LoggerUpdate, BaseModel):
-    query_retrieval_results: Annotated[list[QueryRetrievalResult], add] = []
-    retrieved_documents: Annotated[
-        list[InferenceSection], dedup_inference_sections
-    ] = []
-
-
-class DocRerankingUpdate(LoggerUpdate, BaseModel):
-    reranked_documents: Annotated[list[InferenceSection], dedup_inference_sections] = []
-    sub_question_retrieval_stats: RetrievalFitStats | None = None
-
-
-class ExpandedRetrievalUpdate(LoggerUpdate, BaseModel):
-    expanded_retrieval_result: QuestionRetrievalResult
-
-
-## Graph Output State
-
-
-class ExpandedRetrievalOutput(LoggerUpdate, BaseModel):
-    expanded_retrieval_result: QuestionRetrievalResult = QuestionRetrievalResult()
-    base_expanded_retrieval_result: QuestionRetrievalResult = QuestionRetrievalResult()
-    retrieved_documents: Annotated[
-        list[InferenceSection], dedup_inference_sections
-    ] = []
-
-
-## Graph State
-
-
-class ExpandedRetrievalState(
-    # This includes the core state
-    ExpandedRetrievalInput,
-    QueryExpansionUpdate,
-    DocRetrievalUpdate,
-    DocVerificationUpdate,
-    DocRerankingUpdate,
-    ExpandedRetrievalOutput,
-):
-    pass
-
-
-## Conditional Input States
-
-
-class DocVerificationInput(ExpandedRetrievalInput):
-    retrieved_document_to_verify: InferenceSection
-
-
-class RetrievalInput(ExpandedRetrievalInput):
-    query_to_retrieve: str = ""

backend/onyx/agents/agent_search/models.py

@@ -1,90 +0,0 @@
-from uuid import UUID
-
-from pydantic import BaseModel
-from pydantic import model_validator
-from sqlalchemy.orm import Session
-
-from onyx.chat.prompt_builder.answer_prompt_builder import AnswerPromptBuilder
-from onyx.context.search.models import SearchRequest
-from onyx.file_store.utils import InMemoryChatFile
-from onyx.llm.interfaces import LLM
-from onyx.tools.force import ForceUseTool
-from onyx.tools.tool import Tool
-from onyx.tools.tool_implementations.search.search_tool import SearchTool
-
-
-class GraphInputs(BaseModel):
-    """Input data required for the graph execution"""
-
-    search_request: SearchRequest
-    prompt_builder: AnswerPromptBuilder
-    files: list[InMemoryChatFile] | None = None
-    structured_response_format: dict | None = None
-
-    class Config:
-        arbitrary_types_allowed = True
-
-
-class GraphTooling(BaseModel):
-    """Tools and LLMs available to the graph"""
-
-    primary_llm: LLM
-    fast_llm: LLM
-    search_tool: SearchTool | None = None
-    tools: list[Tool]
-    # Whether to force use of a tool, or to
-    # force tool args IF the tool is used
-    force_use_tool: ForceUseTool
-    using_tool_calling_llm: bool = False
-
-    class Config:
-        arbitrary_types_allowed = True
-
-
-class GraphPersistence(BaseModel):
-    """Configuration for data persistence"""
-
-    chat_session_id: UUID
-    # The message ID of the to-be-created first agent message
-    # in response to the user message that triggered the Pro Search
-    message_id: int
-
-    # The database session the user and initial agent
-    # message were flushed to; only needed for agentic search
-    db_session: Session
-
-    class Config:
-        arbitrary_types_allowed = True
-
-
-class GraphSearchConfig(BaseModel):
-    """Configuration controlling search behavior"""
-
-    use_agentic_search: bool = False
-    # Whether to perform initial search to inform decomposition
-    perform_initial_search_decomposition: bool = True
-
-    # Whether to allow creation of refinement questions (and entity extraction, etc.)
-    allow_refinement: bool = True
-    skip_gen_ai_answer_generation: bool = False
-
-
-class GraphConfig(BaseModel):
-    """
-    Main container for data needed for Langgraph execution
-    """
-
-    inputs: GraphInputs
-    tooling: GraphTooling
-    behavior: GraphSearchConfig
-    # Only needed for agentic search
-    persistence: GraphPersistence
-
-    @model_validator(mode="after")
-    def validate_search_tool(self) -> "GraphConfig":
-        if self.behavior.use_agentic_search and self.tooling.search_tool is None:
-            raise ValueError("search_tool must be provided for agentic search")
-        return self
-
-    class Config:
-        arbitrary_types_allowed = True

backend/onyx/agents/agent_search/orchestration/nodes/basic_use_tool_response.py

@@ -1,77 +0,0 @@
-from typing import cast
-
-from langchain_core.messages import AIMessageChunk
-from langchain_core.runnables.config import RunnableConfig
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.basic.states import BasicOutput
-from onyx.agents.agent_search.basic.states import BasicState
-from onyx.agents.agent_search.basic.utils import process_llm_stream
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.chat.models import LlmDoc
-from onyx.chat.models import OnyxContexts
-from onyx.tools.tool_implementations.search.search_tool import (
-    SEARCH_DOC_CONTENT_ID,
-)
-from onyx.tools.tool_implementations.search_like_tool_utils import (
-    FINAL_CONTEXT_DOCUMENTS_ID,
-)
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def basic_use_tool_response(
-    state: BasicState, config: RunnableConfig, writer: StreamWriter = lambda _: None
-) -> BasicOutput:
-    agent_config = cast(GraphConfig, config["metadata"]["config"])
-    structured_response_format = agent_config.inputs.structured_response_format
-    llm = agent_config.tooling.primary_llm
-    tool_choice = state.tool_choice
-    if tool_choice is None:
-        raise ValueError("Tool choice is None")
-    tool = tool_choice.tool
-    prompt_builder = agent_config.inputs.prompt_builder
-    if state.tool_call_output is None:
-        raise ValueError("Tool call output is None")
-    tool_call_output = state.tool_call_output
-    tool_call_summary = tool_call_output.tool_call_summary
-    tool_call_responses = tool_call_output.tool_call_responses
-
-    new_prompt_builder = tool.build_next_prompt(
-        prompt_builder=prompt_builder,
-        tool_call_summary=tool_call_summary,
-        tool_responses=tool_call_responses,
-        using_tool_calling_llm=agent_config.tooling.using_tool_calling_llm,
-    )
-
-    final_search_results = []
-    initial_search_results = []
-    for yield_item in tool_call_responses:
-        if yield_item.id == FINAL_CONTEXT_DOCUMENTS_ID:
-            final_search_results = cast(list[LlmDoc], yield_item.response)
-        elif yield_item.id == SEARCH_DOC_CONTENT_ID:
-            search_contexts = cast(OnyxContexts, yield_item.response).contexts
-            for doc in search_contexts:
-                if doc.document_id not in initial_search_results:
-                    initial_search_results.append(doc)
-
-    new_tool_call_chunk = AIMessageChunk(content="")
-    if not agent_config.behavior.skip_gen_ai_answer_generation:
-        stream = llm.stream(
-            prompt=new_prompt_builder.build(),
-            structured_response_format=structured_response_format,
-        )
-
-        # For now, we don't do multiple tool calls, so we ignore the tool_message
-        new_tool_call_chunk = process_llm_stream(
-            stream,
-            True,
-            writer,
-            final_search_results=final_search_results,
-            # when the search tool is called with specific doc ids, initial search
-            # results are not output. But, we still want i.e. citations to be processed.
-            displayed_search_results=initial_search_results or final_search_results,
-        )
-
-    return BasicOutput(tool_call_chunk=new_tool_call_chunk)

backend/onyx/agents/agent_search/orchestration/nodes/llm_tool_choice.py

@@ -1,154 +0,0 @@
-from typing import cast
-from uuid import uuid4
-
-from langchain_core.messages import ToolCall
-from langchain_core.runnables.config import RunnableConfig
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.basic.utils import process_llm_stream
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.orchestration.states import ToolChoice
-from onyx.agents.agent_search.orchestration.states import ToolChoiceState
-from onyx.agents.agent_search.orchestration.states import ToolChoiceUpdate
-from onyx.chat.prompt_builder.answer_prompt_builder import AnswerPromptBuilder
-from onyx.chat.tool_handling.tool_response_handler import get_tool_by_name
-from onyx.chat.tool_handling.tool_response_handler import (
-    get_tool_call_for_non_tool_calling_llm_impl,
-)
-from onyx.tools.tool import Tool
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-# TODO: break this out into an implementation function
-# and a function that handles extracting the necessary fields
-# from the state and config
-# TODO: fan-out to multiple tool call nodes? Make this configurable?
-def llm_tool_choice(
-    state: ToolChoiceState,
-    config: RunnableConfig,
-    writer: StreamWriter = lambda _: None,
-) -> ToolChoiceUpdate:
-    """
-    This node is responsible for calling the LLM to choose a tool. If no tool is chosen,
-    The node MAY emit an answer, depending on whether state["should_stream_answer"] is set.
-    """
-    should_stream_answer = state.should_stream_answer
-
-    agent_config = cast(GraphConfig, config["metadata"]["config"])
-    using_tool_calling_llm = agent_config.tooling.using_tool_calling_llm
-    prompt_builder = state.prompt_snapshot or agent_config.inputs.prompt_builder
-
-    llm = agent_config.tooling.primary_llm
-    skip_gen_ai_answer_generation = agent_config.behavior.skip_gen_ai_answer_generation
-
-    structured_response_format = agent_config.inputs.structured_response_format
-    tools = [
-        tool for tool in (agent_config.tooling.tools or []) if tool.name in state.tools
-    ]
-    force_use_tool = agent_config.tooling.force_use_tool
-
-    tool, tool_args = None, None
-    if force_use_tool.force_use and force_use_tool.args is not None:
-        tool_name, tool_args = (
-            force_use_tool.tool_name,
-            force_use_tool.args,
-        )
-        tool = get_tool_by_name(tools, tool_name)
-
-    # special pre-logic for non-tool calling LLM case
-    elif not using_tool_calling_llm and tools:
-        chosen_tool_and_args = get_tool_call_for_non_tool_calling_llm_impl(
-            force_use_tool=force_use_tool,
-            tools=tools,
-            prompt_builder=prompt_builder,
-            llm=llm,
-        )
-        if chosen_tool_and_args:
-            tool, tool_args = chosen_tool_and_args
-
-    # If we have a tool and tool args, we are ready to request a tool call.
-    # This only happens if the tool call was forced or we are using a non-tool calling LLM.
-    if tool and tool_args:
-        return ToolChoiceUpdate(
-            tool_choice=ToolChoice(
-                tool=tool,
-                tool_args=tool_args,
-                id=str(uuid4()),
-            ),
-        )
-
-    # if we're skipping gen ai answer generation, we should only
-    # continue if we're forcing a tool call (which will be emitted by
-    # the tool calling llm in the stream() below)
-    if skip_gen_ai_answer_generation and not force_use_tool.force_use:
-        return ToolChoiceUpdate(
-            tool_choice=None,
-        )
-
-    built_prompt = (
-        prompt_builder.build()
-        if isinstance(prompt_builder, AnswerPromptBuilder)
-        else prompt_builder.built_prompt
-    )
-    # At this point, we are either using a tool calling LLM or we are skipping the tool call.
-    # DEBUG: good breakpoint
-    stream = llm.stream(
-        # For tool calling LLMs, we want to insert the task prompt as part of this flow, this is because the LLM
-        # may choose to not call any tools and just generate the answer, in which case the task prompt is needed.
-        prompt=built_prompt,
-        tools=[tool.tool_definition() for tool in tools] or None,
-        tool_choice=("required" if tools and force_use_tool.force_use else None),
-        structured_response_format=structured_response_format,
-    )
-
-    tool_message = process_llm_stream(
-        stream,
-        should_stream_answer
-        and not agent_config.behavior.skip_gen_ai_answer_generation,
-        writer,
-    )
-
-    # If no tool calls are emitted by the LLM, we should not choose a tool
-    if len(tool_message.tool_calls) == 0:
-        logger.debug("No tool calls emitted by LLM")
-        return ToolChoiceUpdate(
-            tool_choice=None,
-        )
-
-    # TODO: here we could handle parallel tool calls. Right now
-    # we just pick the first one that matches.
-    selected_tool: Tool | None = None
-    selected_tool_call_request: ToolCall | None = None
-    for tool_call_request in tool_message.tool_calls:
-        known_tools_by_name = [
-            tool for tool in tools if tool.name == tool_call_request["name"]
-        ]
-
-        if known_tools_by_name:
-            selected_tool = known_tools_by_name[0]
-            selected_tool_call_request = tool_call_request
-            break
-
-        logger.error(
-            "Tool call requested with unknown name field. \n"
-            f"tools: {tools}"
-            f"tool_call_request: {tool_call_request}"
-        )
-
-    if not selected_tool or not selected_tool_call_request:
-        raise ValueError(
-            f"Tool call attempted with tool {selected_tool}, request {selected_tool_call_request}"
-        )
-
-    logger.debug(f"Selected tool: {selected_tool.name}")
-    logger.debug(f"Selected tool call request: {selected_tool_call_request}")
-
-    return ToolChoiceUpdate(
-        tool_choice=ToolChoice(
-            tool=selected_tool,
-            tool_args=selected_tool_call_request["args"],
-            id=selected_tool_call_request["id"],
-        ),
-    )

backend/onyx/agents/agent_search/orchestration/nodes/prepare_tool_input.py

@@ -1,17 +0,0 @@
-from typing import Any
-from typing import cast
-
-from langchain_core.runnables.config import RunnableConfig
-
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.orchestration.states import ToolChoiceInput
-
-
-def prepare_tool_input(state: Any, config: RunnableConfig) -> ToolChoiceInput:
-    agent_config = cast(GraphConfig, config["metadata"]["config"])
-    return ToolChoiceInput(
-        # NOTE: this node is used at the top level of the agent, so we always stream
-        should_stream_answer=True,
-        prompt_snapshot=None,  # uses default prompt builder
-        tools=[tool.name for tool in (agent_config.tooling.tools or [])],
-    )

backend/onyx/agents/agent_search/orchestration/nodes/tool_call.py

@@ -1,79 +0,0 @@
-from typing import cast
-
-from langchain_core.messages import AIMessageChunk
-from langchain_core.messages.tool import ToolCall
-from langchain_core.runnables.config import RunnableConfig
-from langgraph.types import StreamWriter
-
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.orchestration.states import ToolCallOutput
-from onyx.agents.agent_search.orchestration.states import ToolCallUpdate
-from onyx.agents.agent_search.orchestration.states import ToolChoiceUpdate
-from onyx.agents.agent_search.shared_graph_utils.utils import write_custom_event
-from onyx.chat.models import AnswerPacket
-from onyx.tools.message import build_tool_message
-from onyx.tools.message import ToolCallSummary
-from onyx.tools.tool_runner import ToolRunner
-from onyx.utils.logger import setup_logger
-
-
-logger = setup_logger()
-
-
-class ToolCallException(Exception):
-    """Exception raised for errors during tool calls."""
-
-
-def emit_packet(packet: AnswerPacket, writer: StreamWriter) -> None:
-    write_custom_event("basic_response", packet, writer)
-
-
-def tool_call(
-    state: ToolChoiceUpdate,
-    config: RunnableConfig,
-    writer: StreamWriter = lambda _: None,
-) -> ToolCallUpdate:
-    """Calls the tool specified in the state and updates the state with the result"""
-
-    cast(GraphConfig, config["metadata"]["config"])
-
-    tool_choice = state.tool_choice
-    if tool_choice is None:
-        raise ValueError("Cannot invoke tool call node without a tool choice")
-
-    tool = tool_choice.tool
-    tool_args = tool_choice.tool_args
-    tool_id = tool_choice.id
-    tool_runner = ToolRunner(tool, tool_args)
-    tool_kickoff = tool_runner.kickoff()
-
-    emit_packet(tool_kickoff, writer)
-
-    try:
-        tool_responses = []
-        for response in tool_runner.tool_responses():
-            tool_responses.append(response)
-            emit_packet(response, writer)
-
-        tool_final_result = tool_runner.tool_final_result()
-        emit_packet(tool_final_result, writer)
-    except Exception as e:
-        raise ToolCallException(
-            f"Error during tool call for {tool.display_name}: {e}"
-        ) from e
-
-    tool_call = ToolCall(name=tool.name, args=tool_args, id=tool_id)
-    tool_call_summary = ToolCallSummary(
-        tool_call_request=AIMessageChunk(content="", tool_calls=[tool_call]),
-        tool_call_result=build_tool_message(
-            tool_call, tool_runner.tool_message_content()
-        ),
-    )
-
-    tool_call_output = ToolCallOutput(
-        tool_call_summary=tool_call_summary,
-        tool_call_kickoff=tool_kickoff,
-        tool_call_responses=tool_responses,
-        tool_call_final_result=tool_final_result,
-    )
-    return ToolCallUpdate(tool_call_output=tool_call_output)

backend/onyx/agents/agent_search/orchestration/states.py

@@ -1,48 +0,0 @@
-from pydantic import BaseModel
-
-from onyx.chat.prompt_builder.answer_prompt_builder import PromptSnapshot
-from onyx.tools.message import ToolCallSummary
-from onyx.tools.models import ToolCallFinalResult
-from onyx.tools.models import ToolCallKickoff
-from onyx.tools.models import ToolResponse
-from onyx.tools.tool import Tool
-
-
-# TODO: adapt the tool choice/tool call to allow for parallel tool calls by
-# creating a subgraph that can be invoked in parallel via Send/Command APIs
-class ToolChoiceInput(BaseModel):
-    should_stream_answer: bool = True
-    # default to the prompt builder from the config, but
-    # allow overrides for arbitrary tool calls
-    prompt_snapshot: PromptSnapshot | None = None
-
-    # names of tools to use for tool calling. Filters the tools available in the config
-    tools: list[str] = []
-
-
-class ToolCallOutput(BaseModel):
-    tool_call_summary: ToolCallSummary
-    tool_call_kickoff: ToolCallKickoff
-    tool_call_responses: list[ToolResponse]
-    tool_call_final_result: ToolCallFinalResult
-
-
-class ToolCallUpdate(BaseModel):
-    tool_call_output: ToolCallOutput | None = None
-
-
-class ToolChoice(BaseModel):
-    tool: Tool
-    tool_args: dict
-    id: str | None
-
-    class Config:
-        arbitrary_types_allowed = True
-
-
-class ToolChoiceUpdate(BaseModel):
-    tool_choice: ToolChoice | None = None
-
-
-class ToolChoiceState(ToolChoiceUpdate, ToolChoiceInput):
-    pass

backend/onyx/agents/agent_search/run_graph.py

@@ -1,213 +0,0 @@
-from collections.abc import Iterable
-from datetime import datetime
-from typing import cast
-
-from langchain_core.runnables.schema import CustomStreamEvent
-from langchain_core.runnables.schema import StreamEvent
-from langgraph.graph.state import CompiledStateGraph
-
-from onyx.agents.agent_search.basic.graph_builder import basic_graph_builder
-from onyx.agents.agent_search.basic.states import BasicInput
-from onyx.agents.agent_search.deep_search.main.graph_builder import (
-    main_graph_builder as main_graph_builder_a,
-)
-from onyx.agents.agent_search.deep_search.main.states import (
-    MainInput as MainInput_a,
-)
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.utils import get_test_config
-from onyx.chat.models import AgentAnswerPiece
-from onyx.chat.models import AnswerPacket
-from onyx.chat.models import AnswerStream
-from onyx.chat.models import ExtendedToolResponse
-from onyx.chat.models import RefinedAnswerImprovement
-from onyx.chat.models import StreamStopInfo
-from onyx.chat.models import SubQueryPiece
-from onyx.chat.models import SubQuestionPiece
-from onyx.chat.models import ToolResponse
-from onyx.configs.agent_configs import ALLOW_REFINEMENT
-from onyx.configs.agent_configs import INITIAL_SEARCH_DECOMPOSITION_ENABLED
-from onyx.context.search.models import SearchRequest
-from onyx.db.engine import get_session_context_manager
-from onyx.llm.factory import get_default_llms
-from onyx.tools.tool_runner import ToolCallKickoff
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-_COMPILED_GRAPH: CompiledStateGraph | None = None
-
-
-def _parse_agent_event(
-    event: StreamEvent,
-) -> AnswerPacket | None:
-    """
-    Parse the event into a typed object.
-    Return None if we are not interested in the event.
-    """
-
-    event_type = event["event"]
-
-    # We always just yield the event data, but this piece is useful for two development reasons:
-    # 1. It's a list of the names of every place we dispatch a custom event
-    # 2. We maintain the intended types yielded by each event
-    if event_type == "on_custom_event":
-        if event["name"] == "decomp_qs":
-            return cast(SubQuestionPiece, event["data"])
-        elif event["name"] == "subqueries":
-            return cast(SubQueryPiece, event["data"])
-        elif event["name"] == "sub_answers":
-            return cast(AgentAnswerPiece, event["data"])
-        elif event["name"] == "stream_finished":
-            return cast(StreamStopInfo, event["data"])
-        elif event["name"] == "initial_agent_answer":
-            return cast(AgentAnswerPiece, event["data"])
-        elif event["name"] == "refined_agent_answer":
-            return cast(AgentAnswerPiece, event["data"])
-        elif event["name"] == "start_refined_answer_creation":
-            return cast(ToolCallKickoff, event["data"])
-        elif event["name"] == "tool_response":
-            return cast(ToolResponse, event["data"])
-        elif event["name"] == "basic_response":
-            return cast(AnswerPacket, event["data"])
-        elif event["name"] == "refined_answer_improvement":
-            return cast(RefinedAnswerImprovement, event["data"])
-    return None
-
-
-def manage_sync_streaming(
-    compiled_graph: CompiledStateGraph,
-    config: GraphConfig,
-    graph_input: BasicInput | MainInput_a,
-) -> Iterable[StreamEvent]:
-    message_id = config.persistence.message_id if config.persistence else None
-    for event in compiled_graph.stream(
-        stream_mode="custom",
-        input=graph_input,
-        config={"metadata": {"config": config, "thread_id": str(message_id)}},
-    ):
-        yield cast(CustomStreamEvent, event)
-
-
-def run_graph(
-    compiled_graph: CompiledStateGraph,
-    config: GraphConfig,
-    input: BasicInput | MainInput_a,
-) -> AnswerStream:
-    config.behavior.perform_initial_search_decomposition = (
-        INITIAL_SEARCH_DECOMPOSITION_ENABLED
-    )
-    config.behavior.allow_refinement = ALLOW_REFINEMENT
-
-    for event in manage_sync_streaming(
-        compiled_graph=compiled_graph, config=config, graph_input=input
-    ):
-        if not (parsed_object := _parse_agent_event(event)):
-            continue
-
-        yield parsed_object
-
-
-# It doesn't actually take very long to load the graph, but we'd rather
-# not compile it again on every request.
-def load_compiled_graph() -> CompiledStateGraph:
-    global _COMPILED_GRAPH
-    if _COMPILED_GRAPH is None:
-        graph = main_graph_builder_a()
-        _COMPILED_GRAPH = graph.compile()
-    return _COMPILED_GRAPH
-
-
-def run_main_graph(
-    config: GraphConfig,
-) -> AnswerStream:
-    compiled_graph = load_compiled_graph()
-
-    input = MainInput_a(
-        base_question=config.inputs.search_request.query, log_messages=[]
-    )
-
-    # Agent search is not a Tool per se, but this is helpful for the frontend
-    yield ToolCallKickoff(
-        tool_name="agent_search_0",
-        tool_args={"query": config.inputs.search_request.query},
-    )
-    yield from run_graph(compiled_graph, config, input)
-
-
-def run_basic_graph(
-    config: GraphConfig,
-) -> AnswerStream:
-    graph = basic_graph_builder()
-    compiled_graph = graph.compile()
-    input = BasicInput()
-    return run_graph(compiled_graph, config, input)
-
-
-if __name__ == "__main__":
-    for _ in range(1):
-        query_start_time = datetime.now()
-        logger.debug(f"Start at {query_start_time}")
-        graph = main_graph_builder_a()
-        compiled_graph = graph.compile()
-        query_end_time = datetime.now()
-        logger.debug(f"Graph compiled in {query_end_time - query_start_time} seconds")
-        primary_llm, fast_llm = get_default_llms()
-        search_request = SearchRequest(
-            # query="what can you do with gitlab?",
-            # query="What are the guiding principles behind the development of cockroachDB",
-            # query="What are the temperatures in Munich, Hawaii, and New York?",
-            # query="When was Washington born?",
-            # query="What is Onyx?",
-            # query="What is the difference between astronomy and astrology?",
-            query="Do a search to tell me what is the difference between astronomy and astrology?",
-        )
-
-        with get_session_context_manager() as db_session:
-            config = get_test_config(db_session, primary_llm, fast_llm, search_request)
-            assert (
-                config.persistence is not None
-            ), "set a chat session id to run this test"
-
-            # search_request.persona = get_persona_by_id(1, None, db_session)
-            # config.perform_initial_search_path_decision = False
-            config.behavior.perform_initial_search_decomposition = True
-            input = MainInput_a(
-                base_question=config.inputs.search_request.query, log_messages=[]
-            )
-
-            tool_responses: list = []
-            for output in run_graph(compiled_graph, config, input):
-                if isinstance(output, ToolCallKickoff):
-                    pass
-                elif isinstance(output, ExtendedToolResponse):
-                    tool_responses.append(output.response)
-                    logger.info(
-                        f"   ---- ET {output.level} - {output.level_question_num} |  "
-                    )
-                elif isinstance(output, SubQueryPiece):
-                    logger.info(
-                        f"Sq {output.level} - {output.level_question_num} - {output.sub_query} | "
-                    )
-                elif isinstance(output, SubQuestionPiece):
-                    logger.info(
-                        f"SQ {output.level} - {output.level_question_num} - {output.sub_question} | "
-                    )
-                elif (
-                    isinstance(output, AgentAnswerPiece)
-                    and output.answer_type == "agent_sub_answer"
-                ):
-                    logger.info(
-                        f"   ---- SA {output.level} - {output.level_question_num} {output.answer_piece} | "
-                    )
-                elif (
-                    isinstance(output, AgentAnswerPiece)
-                    and output.answer_type == "agent_level_answer"
-                ):
-                    logger.info(
-                        f"   ---------- FA {output.level} - {output.level_question_num}  {output.answer_piece} | "
-                    )
-                elif isinstance(output, RefinedAnswerImprovement):
-                    logger.info(
-                        f"   ---------- RE {output.refined_answer_improvement} | "
-                    )

backend/onyx/agents/agent_search/shared_graph_utils/agent_prompt_ops.py

@@ -1,152 +0,0 @@
-from langchain.schema import AIMessage
-from langchain.schema import HumanMessage
-from langchain.schema import SystemMessage
-from langchain_core.messages.tool import ToolMessage
-
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.shared_graph_utils.models import (
-    AgentPromptEnrichmentComponents,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import (
-    get_persona_agent_prompt_expressions,
-)
-from onyx.agents.agent_search.shared_graph_utils.utils import remove_document_citations
-from onyx.agents.agent_search.shared_graph_utils.utils import summarize_history
-from onyx.configs.agent_configs import AGENT_MAX_STATIC_HISTORY_WORD_LENGTH
-from onyx.configs.constants import MessageType
-from onyx.context.search.models import InferenceSection
-from onyx.llm.interfaces import LLMConfig
-from onyx.llm.utils import get_max_input_tokens
-from onyx.natural_language_processing.utils import get_tokenizer
-from onyx.natural_language_processing.utils import tokenizer_trim_content
-from onyx.prompts.agent_search import HISTORY_FRAMING_PROMPT
-from onyx.prompts.agent_search import SUB_QUESTION_RAG_PROMPT
-from onyx.prompts.prompt_utils import build_date_time_string
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def build_sub_question_answer_prompt(
-    question: str,
-    original_question: str,
-    docs: list[InferenceSection],
-    persona_specification: str,
-    config: LLMConfig,
-) -> list[SystemMessage | HumanMessage | AIMessage | ToolMessage]:
-    system_message = SystemMessage(
-        content=persona_specification,
-    )
-
-    date_str = build_date_time_string()
-
-    # TODO: This should include document metadata and title
-    docs_format_list = [
-        f"Document Number: [D{doc_num + 1}]\nContent: {doc.combined_content}\n\n"
-        for doc_num, doc in enumerate(docs)
-    ]
-
-    docs_str = "\n\n".join(docs_format_list)
-
-    docs_str = trim_prompt_piece(
-        config,
-        docs_str,
-        SUB_QUESTION_RAG_PROMPT + question + original_question + date_str,
-    )
-    human_message = HumanMessage(
-        content=SUB_QUESTION_RAG_PROMPT.format(
-            question=question,
-            original_question=original_question,
-            context=docs_str,
-            date_prompt=date_str,
-        )
-    )
-
-    return [system_message, human_message]
-
-
-def trim_prompt_piece(config: LLMConfig, prompt_piece: str, reserved_str: str) -> str:
-    # TODO: save the max input tokens in LLMConfig
-    max_tokens = get_max_input_tokens(
-        model_provider=config.model_provider,
-        model_name=config.model_name,
-    )
-
-    # no need to trim if a conservative estimate of one token
-    # per character is already less than the max tokens
-    if len(prompt_piece) + len(reserved_str) < max_tokens:
-        return prompt_piece
-
-    llm_tokenizer = get_tokenizer(
-        provider_type=config.model_provider,
-        model_name=config.model_name,
-    )
-
-    # slightly conservative trimming
-    return tokenizer_trim_content(
-        content=prompt_piece,
-        desired_length=max_tokens - len(llm_tokenizer.encode(reserved_str)),
-        tokenizer=llm_tokenizer,
-    )
-
-
-def build_history_prompt(config: GraphConfig, question: str) -> str:
-    prompt_builder = config.inputs.prompt_builder
-    persona_base = get_persona_agent_prompt_expressions(
-        config.inputs.search_request.persona
-    ).base_prompt
-
-    if prompt_builder is None:
-        return ""
-
-    if prompt_builder.single_message_history is not None:
-        history = prompt_builder.single_message_history
-    else:
-        history_components = []
-        previous_message_type = None
-        for message in prompt_builder.raw_message_history:
-            if message.message_type == MessageType.USER:
-                history_components.append(f"User: {message.message}\n")
-                previous_message_type = MessageType.USER
-            elif message.message_type == MessageType.ASSISTANT:
-                # Previously there could be multiple assistant messages in a row
-                # Now this is handled at the message history construction
-                assert previous_message_type is not MessageType.ASSISTANT
-                history_components.append(f"You/Agent: {message.message}\n")
-                previous_message_type = MessageType.ASSISTANT
-            else:
-                # Other message types are not included here, currently there should be no other message types
-                logger.error(
-                    f"Unhandled message type: {message.message_type} with message: {message.message}"
-                )
-                continue
-
-        history = "\n".join(history_components)
-        history = remove_document_citations(history)
-        if len(history.split()) > AGENT_MAX_STATIC_HISTORY_WORD_LENGTH:
-            history = summarize_history(
-                history=history,
-                question=question,
-                persona_specification=persona_base,
-                llm=config.tooling.fast_llm,
-            )
-
-    return HISTORY_FRAMING_PROMPT.format(history=history) if history else ""
-
-
-def get_prompt_enrichment_components(
-    config: GraphConfig,
-) -> AgentPromptEnrichmentComponents:
-    persona_prompts = get_persona_agent_prompt_expressions(
-        config.inputs.search_request.persona
-    )
-
-    history = build_history_prompt(config, config.inputs.search_request.query)
-
-    date_str = build_date_time_string()
-
-    return AgentPromptEnrichmentComponents(
-        persona_prompts=persona_prompts,
-        history=history,
-        date_str=date_str,
-    )

backend/onyx/agents/agent_search/shared_graph_utils/calculations.py

@@ -1,98 +0,0 @@
-import numpy as np
-
-from onyx.agents.agent_search.shared_graph_utils.models import RetrievalFitScoreMetrics
-from onyx.agents.agent_search.shared_graph_utils.models import RetrievalFitStats
-from onyx.chat.models import SectionRelevancePiece
-from onyx.context.search.models import InferenceSection
-from onyx.utils.logger import setup_logger
-
-logger = setup_logger()
-
-
-def unique_chunk_id(doc: InferenceSection) -> str:
-    return f"{doc.center_chunk.document_id}_{doc.center_chunk.chunk_id}"
-
-
-def calculate_rank_shift(list1: list, list2: list, top_n: int = 20) -> float:
-    shift = 0
-    for rank_first, doc_id in enumerate(list1[:top_n], 1):
-        try:
-            rank_second = list2.index(doc_id) + 1
-        except ValueError:
-            rank_second = len(list2)  # Document not found in second list
-
-        shift += np.abs(rank_first - rank_second) / np.log(1 + rank_first * rank_second)
-
-    return shift / top_n
-
-
-def get_fit_scores(
-    pre_reranked_results: list[InferenceSection],
-    post_reranked_results: list[InferenceSection] | list[SectionRelevancePiece],
-) -> RetrievalFitStats | None:
-    """
-    Calculate retrieval metrics for search purposes
-    """
-
-    if len(pre_reranked_results) == 0 or len(post_reranked_results) == 0:
-        return None
-
-    ranked_sections = {
-        "initial": pre_reranked_results,
-        "reranked": post_reranked_results,
-    }
-
-    fit_eval: RetrievalFitStats = RetrievalFitStats(
-        fit_score_lift=0,
-        rerank_effect=0,
-        fit_scores={
-            "initial": RetrievalFitScoreMetrics(scores={}, chunk_ids=[]),
-            "reranked": RetrievalFitScoreMetrics(scores={}, chunk_ids=[]),
-        },
-    )
-
-    for rank_type, docs in ranked_sections.items():
-        logger.debug(f"rank_type: {rank_type}")
-
-        for i in [1, 5, 10]:
-            fit_eval.fit_scores[rank_type].scores[str(i)] = (
-                sum(
-                    [
-                        float(doc.center_chunk.score)
-                        for doc in docs[:i]
-                        if type(doc) == InferenceSection
-                        and doc.center_chunk.score is not None
-                    ]
-                )
-                / i
-            )
-
-        fit_eval.fit_scores[rank_type].scores["fit_score"] = (
-            1
-            / 3
-            * (
-                fit_eval.fit_scores[rank_type].scores["1"]
-                + fit_eval.fit_scores[rank_type].scores["5"]
-                + fit_eval.fit_scores[rank_type].scores["10"]
-            )
-        )
-
-        fit_eval.fit_scores[rank_type].scores["fit_score"] = fit_eval.fit_scores[
-            rank_type
-        ].scores["1"]
-
-        fit_eval.fit_scores[rank_type].chunk_ids = [
-            unique_chunk_id(doc) for doc in docs if type(doc) == InferenceSection
-        ]
-
-    fit_eval.fit_score_lift = (
-        fit_eval.fit_scores["reranked"].scores["fit_score"]
-        / fit_eval.fit_scores["initial"].scores["fit_score"]
-    )
-
-    fit_eval.rerank_effect = calculate_rank_shift(
-        fit_eval.fit_scores["initial"].chunk_ids,
-        fit_eval.fit_scores["reranked"].chunk_ids,
-    )
-
-    return fit_eval

backend/onyx/agents/agent_search/shared_graph_utils/models.py

@@ -1,128 +0,0 @@
-from pydantic import BaseModel
-
-from onyx.agents.agent_search.deep_search.main.models import (
-    AgentAdditionalMetrics,
-)
-from onyx.agents.agent_search.deep_search.main.models import AgentBaseMetrics
-from onyx.agents.agent_search.deep_search.main.models import (
-    AgentRefinedMetrics,
-)
-from onyx.agents.agent_search.deep_search.main.models import AgentTimings
-from onyx.context.search.models import InferenceSection
-from onyx.tools.models import SearchQueryInfo
-
-
-# Pydantic models for structured outputs
-# class RewrittenQueries(BaseModel):
-#     rewritten_queries: list[str]
-
-
-# class BinaryDecision(BaseModel):
-#     decision: Literal["yes", "no"]
-
-
-# class BinaryDecisionWithReasoning(BaseModel):
-#     reasoning: str
-#     decision: Literal["yes", "no"]
-
-
-class RetrievalFitScoreMetrics(BaseModel):
-    scores: dict[str, float]
-    chunk_ids: list[str]
-
-
-class RetrievalFitStats(BaseModel):
-    fit_score_lift: float
-    rerank_effect: float
-    fit_scores: dict[str, RetrievalFitScoreMetrics]
-
-
-# class AgentChunkScores(BaseModel):
-#     scores: dict[str, dict[str, list[int | float]]]
-
-
-class AgentChunkRetrievalStats(BaseModel):
-    verified_count: int | None = None
-    verified_avg_scores: float | None = None
-    rejected_count: int | None = None
-    rejected_avg_scores: float | None = None
-    verified_doc_chunk_ids: list[str] = []
-    dismissed_doc_chunk_ids: list[str] = []
-
-
-class InitialAgentResultStats(BaseModel):
-    sub_questions: dict[str, float | int | None]
-    original_question: dict[str, float | int | None]
-    agent_effectiveness: dict[str, float | int | None]
-
-
-class RefinedAgentStats(BaseModel):
-    revision_doc_efficiency: float | None
-    revision_question_efficiency: float | None
-
-
-class Term(BaseModel):
-    term_name: str = ""
-    term_type: str = ""
-    term_similar_to: list[str] = []
-
-
-### Models ###
-
-
-class Entity(BaseModel):
-    entity_name: str = ""
-    entity_type: str = ""
-
-
-class Relationship(BaseModel):
-    relationship_name: str = ""
-    relationship_type: str = ""
-    relationship_entities: list[str] = []
-
-
-class EntityRelationshipTermExtraction(BaseModel):
-    entities: list[Entity] = []
-    relationships: list[Relationship] = []
-    terms: list[Term] = []
-
-
-class EntityExtractionResult(BaseModel):
-    retrieved_entities_relationships: EntityRelationshipTermExtraction
-
-
-class QueryRetrievalResult(BaseModel):
-    query: str
-    retrieved_documents: list[InferenceSection]
-    stats: RetrievalFitStats | None
-    query_info: SearchQueryInfo | None
-
-
-class SubQuestionAnswerResults(BaseModel):
-    question: str
-    question_id: str
-    answer: str
-    verified_high_quality: bool
-    sub_query_retrieval_results: list[QueryRetrievalResult]
-    verified_reranked_documents: list[InferenceSection]
-    context_documents: list[InferenceSection]
-    cited_documents: list[InferenceSection]
-    sub_question_retrieval_stats: AgentChunkRetrievalStats
-
-
-class CombinedAgentMetrics(BaseModel):
-    timings: AgentTimings
-    base_metrics: AgentBaseMetrics | None
-    refined_metrics: AgentRefinedMetrics
-    additional_metrics: AgentAdditionalMetrics
-
-
-class PersonaPromptExpressions(BaseModel):
-    contextualized_prompt: str
-    base_prompt: str | None
-
-
-class AgentPromptEnrichmentComponents(BaseModel):
-    persona_prompts: PersonaPromptExpressions
-    history: str
-    date_str: str

backend/onyx/agents/agent_search/shared_graph_utils/operators.py

@@ -1,31 +0,0 @@
-from onyx.agents.agent_search.shared_graph_utils.models import (
-    SubQuestionAnswerResults,
-)
-from onyx.chat.prune_and_merge import _merge_sections
-from onyx.context.search.models import InferenceSection
-
-
-def dedup_inference_sections(
-    list1: list[InferenceSection], list2: list[InferenceSection]
-) -> list[InferenceSection]:
-    deduped = _merge_sections(list1 + list2)
-    return deduped
-
-
-def dedup_question_answer_results(
-    question_answer_results_1: list[SubQuestionAnswerResults],
-    question_answer_results_2: list[SubQuestionAnswerResults],
-) -> list[SubQuestionAnswerResults]:
-    deduped_question_answer_results: list[
-        SubQuestionAnswerResults
-    ] = question_answer_results_1
-    utilized_question_ids: set[str] = set(
-        [x.question_id for x in question_answer_results_1]
-    )
-
-    for question_answer_result in question_answer_results_2:
-        if question_answer_result.question_id not in utilized_question_ids:
-            deduped_question_answer_results.append(question_answer_result)
-            utilized_question_ids.add(question_answer_result.question_id)
-
-    return deduped_question_answer_results

backend/onyx/agents/agent_search/shared_graph_utils/utils.py

@@ -1,441 +0,0 @@
-import os
-import re
-from collections.abc import Callable
-from collections.abc import Iterator
-from collections.abc import Sequence
-from datetime import datetime
-from typing import Any
-from typing import cast
-from typing import Literal
-from typing import TypedDict
-from uuid import UUID
-
-from langchain_core.messages import BaseMessage
-from langchain_core.messages import HumanMessage
-from langgraph.types import StreamWriter
-from sqlalchemy.orm import Session
-
-from onyx.agents.agent_search.models import GraphConfig
-from onyx.agents.agent_search.models import GraphInputs
-from onyx.agents.agent_search.models import GraphPersistence
-from onyx.agents.agent_search.models import GraphSearchConfig
-from onyx.agents.agent_search.models import GraphTooling
-from onyx.agents.agent_search.shared_graph_utils.models import (
-    EntityRelationshipTermExtraction,
-)
-from onyx.agents.agent_search.shared_graph_utils.models import PersonaPromptExpressions
-from onyx.chat.models import AnswerPacket
-from onyx.chat.models import AnswerStyleConfig
-from onyx.chat.models import CitationConfig
-from onyx.chat.models import DocumentPruningConfig
-from onyx.chat.models import PromptConfig
-from onyx.chat.models import SectionRelevancePiece
-from onyx.chat.models import StreamStopInfo
-from onyx.chat.models import StreamStopReason
-from onyx.chat.models import StreamType
-from onyx.chat.prompt_builder.answer_prompt_builder import AnswerPromptBuilder
-from onyx.configs.chat_configs import CHAT_TARGET_CHUNK_PERCENTAGE
-from onyx.configs.chat_configs import MAX_CHUNKS_FED_TO_CHAT
-from onyx.configs.constants import DEFAULT_PERSONA_ID
-from onyx.configs.constants import DISPATCH_SEP_CHAR
-from onyx.configs.constants import FORMAT_DOCS_SEPARATOR
-from onyx.context.search.enums import LLMEvaluationType
-from onyx.context.search.models import InferenceSection
-from onyx.context.search.models import RetrievalDetails
-from onyx.context.search.models import SearchRequest
-from onyx.db.engine import get_session_context_manager
-from onyx.db.persona import get_persona_by_id
-from onyx.db.persona import Persona
-from onyx.llm.interfaces import LLM
-from onyx.prompts.agent_search import (
-    ASSISTANT_SYSTEM_PROMPT_DEFAULT,
-)
-from onyx.prompts.agent_search import (
-    ASSISTANT_SYSTEM_PROMPT_PERSONA,
-)
-from onyx.prompts.agent_search import (
-    HISTORY_CONTEXT_SUMMARY_PROMPT,
-)
-from onyx.prompts.prompt_utils import handle_onyx_date_awareness
-from onyx.tools.force import ForceUseTool
-from onyx.tools.tool_constructor import SearchToolConfig
-from onyx.tools.tool_implementations.search.search_tool import (
-    SEARCH_RESPONSE_SUMMARY_ID,
-)
-from onyx.tools.tool_implementations.search.search_tool import SearchResponseSummary
-from onyx.tools.tool_implementations.search.search_tool import SearchTool
-from onyx.tools.utils import explicit_tool_calling_supported
-
-BaseMessage_Content = str | list[str | dict[str, Any]]
-
-
-# Post-processing
-def format_docs(docs: Sequence[InferenceSection]) -> str:
-    formatted_doc_list = []
-
-    for doc_num, doc in enumerate(docs):
-        title: str | None = doc.center_chunk.title
-        metadata: dict[str, str | list[str]] | None = (
-            doc.center_chunk.metadata if doc.center_chunk.metadata else None
-        )
-
-        doc_str = f"**Document: D{doc_num + 1}**"
-        if title:
-            doc_str += f"\nTitle: {title}"
-        if metadata:
-            metadata_str = ""
-            for key, value in metadata.items():
-                if isinstance(value, str):
-                    metadata_str += f" - {key}: {value}"
-                elif isinstance(value, list):
-                    metadata_str += f" - {key}: {', '.join(value)}"
-            doc_str += f"\nMetadata: {metadata_str}"
-        doc_str += f"\nContent:\n{doc.combined_content}"
-
-        formatted_doc_list.append(doc_str)
-
-    return FORMAT_DOCS_SEPARATOR.join(formatted_doc_list)
-
-
-def format_entity_term_extraction(
-    entity_term_extraction_dict: EntityRelationshipTermExtraction,
-) -> str:
-    entities = entity_term_extraction_dict.entities
-    terms = entity_term_extraction_dict.terms
-    relationships = entity_term_extraction_dict.relationships
-
-    entity_strs = ["\nEntities:\n"]
-    for entity in entities:
-        entity_str = f"{entity.entity_name} ({entity.entity_type})"
-        entity_strs.append(entity_str)
-
-    entity_str = "\n - ".join(entity_strs)
-
-    relationship_strs = ["\n\nRelationships:\n"]
-    for relationship in relationships:
-        relationship_name = relationship.relationship_name
-        relationship_type = relationship.relationship_type
-        relationship_entities = relationship.relationship_entities
-        relationship_str = (
-            f"""{relationship_name} ({relationship_type}): {relationship_entities}"""
-        )
-        relationship_strs.append(relationship_str)
-
-    relationship_str = "\n - ".join(relationship_strs)
-
-    term_strs = ["\n\nTerms:\n"]
-    for term in terms:
-        term_str = f"{term.term_name} ({term.term_type}): similar to {', '.join(term.term_similar_to)}"
-        term_strs.append(term_str)
-
-    term_str = "\n - ".join(term_strs)
-
-    return "\n".join(entity_strs + relationship_strs + term_strs)
-
-
-def get_test_config(
-    db_session: Session,
-    primary_llm: LLM,
-    fast_llm: LLM,
-    search_request: SearchRequest,
-    use_agentic_search: bool = True,
-) -> GraphConfig:
-    persona = get_persona_by_id(DEFAULT_PERSONA_ID, None, db_session)
-    document_pruning_config = DocumentPruningConfig(
-        max_chunks=int(
-            persona.num_chunks
-            if persona.num_chunks is not None
-            else MAX_CHUNKS_FED_TO_CHAT
-        ),
-        max_window_percentage=CHAT_TARGET_CHUNK_PERCENTAGE,
-    )
-
-    answer_style_config = AnswerStyleConfig(
-        citation_config=CitationConfig(
-            # The docs retrieved by this flow are already relevance-filtered
-            all_docs_useful=True
-        ),
-        document_pruning_config=document_pruning_config,
-        structured_response_format=None,
-    )
-
-    search_tool_config = SearchToolConfig(
-        answer_style_config=answer_style_config,
-        document_pruning_config=document_pruning_config,
-        retrieval_options=RetrievalDetails(),  # may want to set dedupe_docs=True
-        rerank_settings=None,  # Can use this to change reranking model
-        selected_sections=None,
-        latest_query_files=None,
-        bypass_acl=False,
-    )
-
-    prompt_config = PromptConfig.from_model(persona.prompts[0])
-
-    search_tool = SearchTool(
-        db_session=db_session,
-        user=None,
-        persona=persona,
-        retrieval_options=search_tool_config.retrieval_options,
-        prompt_config=prompt_config,
-        llm=primary_llm,
-        fast_llm=fast_llm,
-        pruning_config=search_tool_config.document_pruning_config,
-        answer_style_config=search_tool_config.answer_style_config,
-        selected_sections=search_tool_config.selected_sections,
-        chunks_above=search_tool_config.chunks_above,
-        chunks_below=search_tool_config.chunks_below,
-        full_doc=search_tool_config.full_doc,
-        evaluation_type=(
-            LLMEvaluationType.BASIC
-            if persona.llm_relevance_filter
-            else LLMEvaluationType.SKIP
-        ),
-        rerank_settings=search_tool_config.rerank_settings,
-        bypass_acl=search_tool_config.bypass_acl,
-    )
-
-    graph_inputs = GraphInputs(
-        search_request=search_request,
-        prompt_builder=AnswerPromptBuilder(
-            user_message=HumanMessage(content=search_request.query),
-            message_history=[],
-            llm_config=primary_llm.config,
-            raw_user_query=search_request.query,
-            raw_user_uploaded_files=[],
-        ),
-        structured_response_format=answer_style_config.structured_response_format,
-    )
-
-    using_tool_calling_llm = explicit_tool_calling_supported(
-        primary_llm.config.model_provider, primary_llm.config.model_name
-    )
-    graph_tooling = GraphTooling(
-        primary_llm=primary_llm,
-        fast_llm=fast_llm,
-        search_tool=search_tool,
-        tools=[search_tool],
-        force_use_tool=ForceUseTool(force_use=False, tool_name=""),
-        using_tool_calling_llm=using_tool_calling_llm,
-    )
-
-    chat_session_id = os.environ.get("ONYX_AS_CHAT_SESSION_ID")
-    assert (
-        chat_session_id is not None
-    ), "ONYX_AS_CHAT_SESSION_ID must be set for backend tests"
-    graph_persistence = GraphPersistence(
-        db_session=db_session,
-        chat_session_id=UUID(chat_session_id),
-        message_id=1,
-    )
-
-    search_behavior_config = GraphSearchConfig(
-        use_agentic_search=use_agentic_search,
-        skip_gen_ai_answer_generation=False,
-        allow_refinement=True,
-    )
-    graph_config = GraphConfig(
-        inputs=graph_inputs,
-        tooling=graph_tooling,
-        persistence=graph_persistence,
-        behavior=search_behavior_config,
-    )
-
-    return graph_config
-
-
-def get_persona_agent_prompt_expressions(
-    persona: Persona | None,
-) -> PersonaPromptExpressions:
-    if persona is None or len(persona.prompts) == 0:
-        # TODO base_prompt should be None, but no time to properly fix
-        return PersonaPromptExpressions(
-            contextualized_prompt=ASSISTANT_SYSTEM_PROMPT_DEFAULT, base_prompt=""
-        )
-
-    # Only a 1:1 mapping between personas and prompts currently
-    prompt = persona.prompts[0]
-    prompt_config = PromptConfig.from_model(prompt)
-    datetime_aware_system_prompt = handle_onyx_date_awareness(
-        prompt_str=prompt_config.system_prompt,
-        prompt_config=prompt_config,
-        add_additional_info_if_no_tag=prompt.datetime_aware,
-    )
-
-    return PersonaPromptExpressions(
-        contextualized_prompt=ASSISTANT_SYSTEM_PROMPT_PERSONA.format(
-            persona_prompt=datetime_aware_system_prompt
-        ),
-        base_prompt=datetime_aware_system_prompt,
-    )
-
-
-def make_question_id(level: int, question_num: int) -> str:
-    return f"{level}_{question_num}"
-
-
-def parse_question_id(question_id: str) -> tuple[int, int]:
-    level, question_num = question_id.split("_")
-    return int(level), int(question_num)
-
-
-def _dispatch_nonempty(
-    content: str, dispatch_event: Callable[[str, int], None], sep_num: int
-) -> None:
-    """
-    Dispatch a content string if it is not empty using the given callback.
-    This function is used in the context of dispatching some arbitrary number
-    of similar objects which are separated by a separator during the LLM stream.
-    The callback expects a sep_num denoting which object is being dispatched; these
-    numbers go from 1 to however many strings the LLM decides to stream.
-    """
-    if content != "":
-        dispatch_event(content, sep_num)
-
-
-def dispatch_separated(
-    tokens: Iterator[BaseMessage],
-    dispatch_event: Callable[[str, int], None],
-    sep_callback: Callable[[int], None] | None = None,
-    sep: str = DISPATCH_SEP_CHAR,
-) -> list[BaseMessage_Content]:
-    num = 1
-    streamed_tokens: list[BaseMessage_Content] = []
-    for token in tokens:
-        content = cast(str, token.content)
-        if sep in content:
-            sub_question_parts = content.split(sep)
-            _dispatch_nonempty(sub_question_parts[0], dispatch_event, num)
-
-            if sep_callback:
-                sep_callback(num)
-
-            num += 1
-            _dispatch_nonempty(
-                "".join(sub_question_parts[1:]).strip(), dispatch_event, num
-            )
-        else:
-            _dispatch_nonempty(content, dispatch_event, num)
-        streamed_tokens.append(content)
-
-    if sep_callback:
-        sep_callback(num)
-
-    return streamed_tokens
-
-
-def dispatch_main_answer_stop_info(level: int, writer: StreamWriter) -> None:
-    stop_event = StreamStopInfo(
-        stop_reason=StreamStopReason.FINISHED,
-        stream_type=StreamType.MAIN_ANSWER,
-        level=level,
-    )
-    write_custom_event("stream_finished", stop_event, writer)
-
-
-def retrieve_search_docs(
-    search_tool: SearchTool, question: str
-) -> list[InferenceSection]:
-    retrieved_docs: list[InferenceSection] = []
-
-    # new db session to avoid concurrency issues
-    with get_session_context_manager() as db_session:
-        for tool_response in search_tool.run(
-            query=question,
-            force_no_rerank=True,
-            alternate_db_session=db_session,
-        ):
-            # get retrieved docs to send to the rest of the graph
-            if tool_response.id == SEARCH_RESPONSE_SUMMARY_ID:
-                response = cast(SearchResponseSummary, tool_response.response)
-                retrieved_docs = response.top_sections
-                break
-
-    return retrieved_docs
-
-
-def get_answer_citation_ids(answer_str: str) -> list[int]:
-    """
-    Extract citation numbers of format [D<number>] from the answer string.
-    """
-    citation_ids = re.findall(r"\[D(\d+)\]", answer_str)
-    return list(set([(int(id) - 1) for id in citation_ids]))
-
-
-def summarize_history(
-    history: str, question: str, persona_specification: str | None, llm: LLM
-) -> str:
-    history_context_prompt = remove_document_citations(
-        HISTORY_CONTEXT_SUMMARY_PROMPT.format(
-            persona_specification=persona_specification,
-            question=question,
-            history=history,
-        )
-    )
-
-    history_response = llm.invoke(history_context_prompt)
-    assert isinstance(history_response.content, str)
-    return history_response.content
-
-
-# taken from langchain_core.runnables.schema
-# we don't use the one from their library because
-# it includes ids they generate
-class CustomStreamEvent(TypedDict):
-    # Overwrite the event field to be more specific.
-    event: Literal["on_custom_event"]  # type: ignore[misc]
-    """The event type."""
-    name: str
-    """User defined name for the event."""
-    data: Any
-    """The data associated with the event. Free form and can be anything."""
-
-
-def write_custom_event(
-    name: str, event: AnswerPacket, stream_writer: StreamWriter
-) -> None:
-    stream_writer(CustomStreamEvent(event="on_custom_event", name=name, data=event))
-
-
-def relevance_from_docs(
-    relevant_docs: list[InferenceSection],
-) -> list[SectionRelevancePiece]:
-    return [
-        SectionRelevancePiece(
-            relevant=True,
-            content=doc.center_chunk.content,
-            document_id=doc.center_chunk.document_id,
-            chunk_id=doc.center_chunk.chunk_id,
-        )
-        for doc in relevant_docs
-    ]
-
-
-def get_langgraph_node_log_string(
-    graph_component: str,
-    node_name: str,
-    node_start_time: datetime,
-    result: str | None = None,
-) -> str:
-    duration = datetime.now() - node_start_time
-    results_str = "" if result is None else f" -- Result: {result}"
-    return f"{node_start_time} -- {graph_component} - {node_name} -- Time taken: {duration}{results_str}"
-
-
-def remove_document_citations(text: str) -> str:
-    """
-    Removes citation expressions of format '[[D1]]()' from text.
-    The number after D can vary.
-
-    Args:
-        text: Input text containing citations
-
-    Returns:
-        Text with citations removed
-    """
-    # Pattern explanation:
-    # \[(?:D|Q)?\d+\]  matches:
-    #   \[   - literal [ character
-    #   (?:D|Q)?  - optional D or Q character
-    #   \d+  - one or more digits
-    #   \]   - literal ] character
-    return re.sub(r"\[(?:D|Q)?\d+\]", "", text)

backend/onyx/auth/email_utils.py

@@ -10,7 +10,6 @@ from onyx.configs.app_configs import SMTP_PORT
 from onyx.configs.app_configs import SMTP_SERVER
 from onyx.configs.app_configs import SMTP_USER
 from onyx.configs.app_configs import WEB_DOMAIN
-from onyx.configs.constants import TENANT_ID_COOKIE_NAME
 from onyx.db.models import User
 
 
@@ -66,13 +65,9 @@ def send_forgot_password_email(
     user_email: str,
     token: str,
     mail_from: str = EMAIL_FROM,
-    tenant_id: str | None = None,
 ) -> None:
     subject = "Onyx Forgot Password"
     link = f"{WEB_DOMAIN}/auth/reset-password?token={token}"
-    if tenant_id:
-        link += f"&{TENANT_ID_COOKIE_NAME}={tenant_id}"
-        # Keep search param same name as cookie for simplicity
     body = f"Click the following link to reset your password: {link}"
     send_email(user_email, subject, body, mail_from)
 

backend/onyx/auth/schemas.py

@@ -42,10 +42,6 @@ class UserCreate(schemas.BaseUserCreate):
     tenant_id: str | None = None
 
 
-class UserUpdateWithRole(schemas.BaseUserUpdate):
-    role: UserRole
-
-
 class UserUpdate(schemas.BaseUserUpdate):
     """
     Role updates are not allowed through the user update endpoint for security reasons

backend/onyx/auth/users.py

@@ -57,7 +57,7 @@ from onyx.auth.invited_users import get_invited_users
 from onyx.auth.schemas import AuthBackend
 from onyx.auth.schemas import UserCreate
 from onyx.auth.schemas import UserRole
-from onyx.auth.schemas import UserUpdateWithRole
+from onyx.auth.schemas import UserUpdate
 from onyx.configs.app_configs import AUTH_BACKEND
 from onyx.configs.app_configs import AUTH_COOKIE_EXPIRE_TIME_SECONDS
 from onyx.configs.app_configs import AUTH_TYPE
@@ -73,7 +73,6 @@ from onyx.configs.app_configs import WEB_DOMAIN
 from onyx.configs.constants import AuthType
 from onyx.configs.constants import DANSWER_API_KEY_DUMMY_EMAIL_DOMAIN
 from onyx.configs.constants import DANSWER_API_KEY_PREFIX
-from onyx.configs.constants import FASTAPI_USERS_AUTH_COOKIE_NAME
 from onyx.configs.constants import MilestoneRecordType
 from onyx.configs.constants import OnyxRedisLocks
 from onyx.configs.constants import PASSWORD_SPECIAL_CHARS
@@ -217,26 +216,9 @@ class UserManager(UUIDIDMixin, BaseUserManager[User, uuid.UUID]):
     reset_password_token_secret = USER_AUTH_SECRET
     verification_token_secret = USER_AUTH_SECRET
     verification_token_lifetime_seconds = AUTH_COOKIE_EXPIRE_TIME_SECONDS
+
     user_db: SQLAlchemyUserDatabase[User, uuid.UUID]
 
-    async def get_by_email(self, user_email: str) -> User:
-        tenant_id = fetch_ee_implementation_or_noop(
-            "onyx.server.tenants.user_mapping", "get_tenant_id_for_email", None
-        )(user_email)
-        async with get_async_session_with_tenant(tenant_id) as db_session:
-            if MULTI_TENANT:
-                tenant_user_db = SQLAlchemyUserAdminDB[User, uuid.UUID](
-                    db_session, User, OAuthAccount
-                )
-                user = await tenant_user_db.get_by_email(user_email)
-            else:
-                user = await self.user_db.get_by_email(user_email)
-
-        if not user:
-            raise exceptions.UserNotExists()
-
-        return user
-
     async def create(
         self,
         user_create: schemas.UC | UserCreate,
@@ -264,10 +246,10 @@ class UserManager(UUIDIDMixin, BaseUserManager[User, uuid.UUID]):
             referral_source=referral_source,
             request=request,
         )
-        user: User
 
         async with get_async_session_with_tenant(tenant_id) as db_session:
             token = CURRENT_TENANT_ID_CONTEXTVAR.set(tenant_id)
+
             verify_email_is_invited(user_create.email)
             verify_email_domain(user_create.email)
             if MULTI_TENANT:
@@ -286,16 +268,16 @@ class UserManager(UUIDIDMixin, BaseUserManager[User, uuid.UUID]):
                     user_create.role = UserRole.ADMIN
                 else:
                     user_create.role = UserRole.BASIC
+
             try:
                 user = await super().create(user_create, safe=safe, request=request)  # type: ignore
             except exceptions.UserAlreadyExists:
                 user = await self.get_by_email(user_create.email)
                 # Handle case where user has used product outside of web and is now creating an account through web
                 if not user.role.is_web_login() and user_create.role.is_web_login():
-                    user_update = UserUpdateWithRole(
+                    user_update = UserUpdate(
                         password=user_create.password,
                         is_verified=user_create.is_verified,
-                        role=user_create.role,
                     )
                     user = await self.update(user_update, user)
                 else:
@@ -303,6 +285,7 @@ class UserManager(UUIDIDMixin, BaseUserManager[User, uuid.UUID]):
 
             finally:
                 CURRENT_TENANT_ID_CONTEXTVAR.reset(token)
+
         return user
 
     async def validate_password(self, password: str, _: schemas.UC | models.UP) -> None:
@@ -389,8 +372,6 @@ class UserManager(UUIDIDMixin, BaseUserManager[User, uuid.UUID]):
                 "refresh_token": refresh_token,
             }
 
-            user: User
-
             try:
                 # Attempt to get user by OAuth account
                 user = await self.get_by_oauth_account(oauth_name, account_id)
@@ -523,15 +504,9 @@ class UserManager(UUIDIDMixin, BaseUserManager[User, uuid.UUID]):
             )
             raise HTTPException(
                 status.HTTP_500_INTERNAL_SERVER_ERROR,
-                "Your admin has not enabled this feature.",
+                "Your admin has not enbaled this feature.",
             )
-        tenant_id = await fetch_ee_implementation_or_noop(
-            "onyx.server.tenants.provisioning",
-            "get_or_provision_tenant",
-            async_return_default_schema,
-        )(email=user.email)
-
-        send_forgot_password_email(user.email, token, tenant_id=tenant_id)
+        send_forgot_password_email(user.email, token)
 
     async def on_after_request_verify(
         self, user: User, token: str, request: Optional[Request] = None
@@ -605,7 +580,6 @@ async def get_user_manager(
 cookie_transport = CookieTransport(
     cookie_max_age=SESSION_EXPIRE_TIME_SECONDS,
     cookie_secure=WEB_DOMAIN.startswith("https"),
-    cookie_name=FASTAPI_USERS_AUTH_COOKIE_NAME,
 )
 
 
@@ -1073,8 +1047,6 @@ async def api_key_dep(
     if AUTH_TYPE == AuthType.DISABLED:
         return None
 
-    user: User | None = None
-
     hashed_api_key = get_hashed_api_key_from_request(request)
     if not hashed_api_key:
         raise HTTPException(status_code=401, detail="Missing API key")

backend/onyx/background/celery/apps/app_base.py

@@ -24,7 +24,6 @@ from onyx.configs.constants import ONYX_CLOUD_CELERY_TASK_PREFIX
 from onyx.configs.constants import OnyxRedisLocks
 from onyx.db.engine import get_sqlalchemy_engine
 from onyx.document_index.vespa.shared_utils.utils import wait_for_vespa_with_timeout
-from onyx.httpx.httpx_pool import HttpxPool
 from onyx.redis.redis_connector import RedisConnector
 from onyx.redis.redis_connector_credential_pair import RedisConnectorCredentialPair
 from onyx.redis.redis_connector_delete import RedisConnectorDelete
@@ -198,8 +197,7 @@ def on_celeryd_init(sender: str, conf: Any = None, **kwargs: Any) -> None:
 
 def wait_for_redis(sender: Any, **kwargs: Any) -> None:
     """Waits for redis to become ready subject to a hardcoded timeout.
-    Will raise WorkerShutdown to kill the celery worker if the timeout
-    is reached."""
+    Will raise WorkerShutdown to kill the celery worker if the timeout is reached."""
 
     r = get_redis_client(tenant_id=None)
 
@@ -318,8 +316,6 @@ def on_worker_ready(sender: Any, **kwargs: Any) -> None:
 
 
 def on_worker_shutdown(sender: Any, **kwargs: Any) -> None:
-    HttpxPool.close_all()
-
     if not celery_is_worker_primary(sender):
         return